RNA–Protein interactions for RNA: ENST00000456210.5

SEMA3B-208, Transcript of semaphorin 3B, humanhuman

TSL 2

Gene SEMA3B, Length 2,065 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-208ENST00000456210 CLEC3BP05452 202 aa14.38□□□□□ -0.11
SEMA3B-208ENST00000456210 XGP55808 180 aa14.38□□□□□ -0.11
SEMA3B-208ENST00000456210 SRSF9Q13242 221 aaKnown RBP eCLIP14.38□□□□□ -0.11
SEMA3B-208ENST00000456210 ZFP2Q6ZN57 461 aa14.38□□□□□ -0.11
SEMA3B-208ENST00000456210 VMO1Q7Z5L0 202 aa14.38□□□□□ -0.11
SEMA3B-208ENST00000456210 ZNF843Q8N446 348 aa14.38□□□□□ -0.11
SEMA3B-208ENST00000456210 WFDC12Q8WWY7 111 aa14.38□□□□□ -0.11
SEMA3B-208ENST00000456210 CARD19Q96LW7 228 aa14.38□□□□□ -0.11
SEMA3B-208ENST00000456210 TRBV20-1A0A075B6N2 111 aa14.37□□□□□ -0.11
SEMA3B-208ENST00000456210 LOC107984156A0A0G2JMH3 177 aa14.37□□□□□ -0.11
SEMA3B-208ENST00000456210 FAM90A27PA6NNH2 459 aa14.37□□□□□ -0.11
SEMA3B-208ENST00000456210 FBXL19-AS1Q494R0 122 aa14.37□□□□□ -0.11
SEMA3B-208ENST00000456210 PRR9Q5T870 116 aa14.37□□□□□ -0.11
SEMA3B-208ENST00000456210 ARL17AQ8IVW1 177 aa14.37□□□□□ -0.11
SEMA3B-208ENST00000456210 Q8N9W7 124 aa14.37□□□□□ -0.11
SEMA3B-208ENST00000456210 NDUFA11Q86Y39 141 aa14.37□□□□□ -0.11
SEMA3B-208ENST00000456210 CCDC140Q96MF4 163 aa14.37□□□□□ -0.11
SEMA3B-208ENST00000456210 U3KQE9 123 aa14.37□□□□□ -0.11
SEMA3B-208ENST00000456210 MYO18BQ8IUG5 2567 aa14.36□□□□□ -0.11
SEMA3B-208ENST00000456210 MINOS1Q5TGZ0 78 aa14.36□□□□□ -0.11
SEMA3B-208ENST00000456210 GLMPQ8WWB7 406 aa14.36□□□□□ -0.11
SEMA3B-208ENST00000456210 RPL39LQ96EH5 51 aaKnown RBP14.36□□□□□ -0.11
SEMA3B-208ENST00000456210 MINOS1-NBL1R4GNA1 71 aa14.36□□□□□ -0.11
SEMA3B-208ENST00000456210 METTL26Q96S19 204 aa14.35□□□□□ -0.11
SEMA3B-208ENST00000456210 A0A0J9YY99 117 aa14.35□□□□□ -0.11
SEMA3B-208ENST00000456210 MED14OSP0DP75 135 aa14.35□□□□□ -0.11
SEMA3B-208ENST00000456210 PAPPA-AS1Q5QFB9 102 aa14.35□□□□□ -0.11
SEMA3B-208ENST00000456210 ARHGAP32A7KAX9 2087 aa14.35□□□□□ -0.11
SEMA3B-208ENST00000456210 PPP1R17O96001 155 aa14.34□□□□□ -0.11
SEMA3B-208ENST00000456210 CRYGDP07320 174 aa14.34□□□□□ -0.11
SEMA3B-208ENST00000456210 C1orf122Q6ZSJ8 110 aa14.34□□□□□ -0.11
SEMA3B-208ENST00000456210 UTP20O75691 2785 aaKnown RBP14.34□□□□□ -0.11
SEMA3B-208ENST00000456210 IGHV1-69DA0A0B4J2H0 117 aa14.34□□□□□ -0.11
SEMA3B-208ENST00000456210 TCL1BO95988 128 aa14.34□□□□□ -0.11
SEMA3B-208ENST00000456210 LINC01560Q8TB33 94 aa14.34□□□□□ -0.11
SEMA3B-208ENST00000456210 PTH2Q96A98 100 aa14.34□□□□□ -0.11
SEMA3B-208ENST00000456210 ERG28Q9UKR5 140 aa14.34□□□□□ -0.11
SEMA3B-208ENST00000456210 IGLV4-69A0A075B6H9 119 aa14.33□□□□□ -0.12
SEMA3B-208ENST00000456210 HERVK_113P61574 105 aa14.33□□□□□ -0.12
SEMA3B-208ENST00000456210 POM121L12Q8N7R1 296 aa14.33□□□□□ -0.12
SEMA3B-208ENST00000456210 ITLN2Q8WWU7 325 aaPredicted RBP14.33□□□□□ -0.12
SEMA3B-208ENST00000456210 IGHV3OR16-13A0A075B7E8 117 aa14.32□□□□□ -0.12
SEMA3B-208ENST00000456210 IGHV3-74A0A0B4J1X5 117 aa14.32□□□□□ -0.12
SEMA3B-208ENST00000456210 CLEC19AQ6UXS0 136 aa14.32□□□□□ -0.12
SEMA3B-208ENST00000456210 C9orf139Q6ZV77 190 aa14.32□□□□□ -0.12
SEMA3B-208ENST00000456210 KLHL30-AS1Q8NEE0 82 aa14.32□□□□□ -0.12
SEMA3B-208ENST00000456210 TIMD4Q96H15 378 aa14.32□□□□□ -0.12
SEMA3B-208ENST00000456210 C11orf86A6NJI1 115 aa14.32□□□□□ -0.12
SEMA3B-208ENST00000456210 A8MWV9 139 aa14.32□□□□□ -0.12
SEMA3B-208ENST00000456210 GNLYP22749 145 aa14.32□□□□□ -0.12
SEMA3B-208ENST00000456210 RPL32P62910 135 aaKnown RBP14.32□□□□□ -0.12
SEMA3B-208ENST00000456210 ECSCRQ19T08 205 aa14.32□□□□□ -0.12
SEMA3B-208ENST00000456210 ZFAND2AQ8N6M9 145 aa14.32□□□□□ -0.12
SEMA3B-208ENST00000456210 C14orf178Q8N769 122 aaPredicted RBP14.32□□□□□ -0.12
SEMA3B-208ENST00000456210 EEF1AKMT3Q96AZ1 226 aa14.32□□□□□ -0.12
SEMA3B-208ENST00000456210 TRAV21A0A0B4J279 112 aa14.31□□□□□ -0.12
SEMA3B-208ENST00000456210 IGHV3-30P01768 117 aa14.31□□□□□ -0.12
SEMA3B-208ENST00000456210 ZNF688P0C7X2 276 aa14.31□□□□□ -0.12
SEMA3B-208ENST00000456210 IGHV3-30-5P0DP03 117 aa14.31□□□□□ -0.12
SEMA3B-208ENST00000456210 ASIPP42127 132 aa14.31□□□□□ -0.12
SEMA3B-208ENST00000456210 SFTA2Q6UW10 78 aa14.31□□□□□ -0.12
SEMA3B-208ENST00000456210 C10orf126Q8N4M7 172 aa14.31□□□□□ -0.12
SEMA3B-208ENST00000456210 TRBV7-1A0A0A6YYK4 115 aa14.3□□□□□ -0.12
SEMA3B-208ENST00000456210 M0QXV9 152 aa14.3□□□□□ -0.12
SEMA3B-208ENST00000456210 ATP6V0E1O15342 81 aa14.3□□□□□ -0.12
SEMA3B-208ENST00000456210 CFC1BP0CG36 223 aa14.3□□□□□ -0.12
SEMA3B-208ENST00000456210 CFC1P0CG37 223 aa14.3□□□□□ -0.12
SEMA3B-208ENST00000456210 ADORA2A-AS1P86434 159 aa14.3□□□□□ -0.12
SEMA3B-208ENST00000456210 GPHB5Q86YW7 130 aa14.3□□□□□ -0.12
SEMA3B-208ENST00000456210 C16orf92Q96LL3 132 aa14.3□□□□□ -0.12
SEMA3B-208ENST00000456210 LINC00477Q96M19 166 aa14.3□□□□□ -0.12
SEMA3B-208ENST00000456210 SPTBN1Q01082 2364 aaKnown RBP14.3□□□□□ -0.12
SEMA3B-208ENST00000456210 DUSP14O95147 198 aaKnown RBP14.3□□□□□ -0.12
SEMA3B-208ENST00000456210 TSHBP01222 138 aa14.3□□□□□ -0.12
SEMA3B-208ENST00000456210 PHLDA3Q9Y5J5 127 aa14.3□□□□□ -0.12
SEMA3B-208ENST00000456210 IGHV3-49A0A0A0MS15 119 aa14.29□□□□□ -0.12
SEMA3B-208ENST00000456210 GRNP28799 593 aaKnown RBP14.29□□□□□ -0.12
SEMA3B-208ENST00000456210 SLC25A29Q8N8R3 303 aa14.29□□□□□ -0.12
SEMA3B-208ENST00000456210 IGIPA6NJ69 53 aa14.29□□□□□ -0.12
SEMA3B-208ENST00000456210 LINC01548A6NM66 108 aa14.29□□□□□ -0.12
SEMA3B-208ENST00000456210 TMEM262E9PQX1 116 aa14.29□□□□□ -0.12
SEMA3B-208ENST00000456210 IGF1P05019 195 aa14.29□□□□□ -0.12
SEMA3B-208ENST00000456210 MGPP08493 103 aa14.29□□□□□ -0.12
SEMA3B-208ENST00000456210 S100A4P26447 101 aaKnown RBP14.29□□□□□ -0.12
SEMA3B-208ENST00000456210 C20orf173Q96LM9 149 aa14.29□□□□□ -0.12
SEMA3B-208ENST00000456210 TENM4Q6N022 2769 aa14.29□□□□□ -0.12
SEMA3B-208ENST00000456210 ANKRD29Q8N6D5 301 aa14.28□□□□□ -0.12
SEMA3B-208ENST00000456210 USP9XQ93008 2570 aaPredicted RBP14.28□□□□□ -0.12
SEMA3B-208ENST00000456210 LY6HO94772 140 aa14.27□□□□□ -0.12
SEMA3B-208ENST00000456210 PMVKQ15126 192 aa14.27□□□□□ -0.12
SEMA3B-208ENST00000456210 UBR5O95071 2799 aaPredicted RBP14.27□□□□□ -0.12
SEMA3B-208ENST00000456210 NXPH4O95158 308 aa14.27□□□□□ -0.13
SEMA3B-208ENST00000456210 Q6ZS46 218 aa14.27□□□□□ -0.13
SEMA3B-208ENST00000456210 RNF183Q96D59 192 aa14.27□□□□□ -0.13
SEMA3B-208ENST00000456210 TMEM141Q96I45 108 aa14.27□□□□□ -0.13
SEMA3B-208ENST00000456210 IGHV4OR15-8A0A075B7B6 117 aa14.26□□□□□ -0.13
SEMA3B-208ENST00000456210 A0A087WW49 117 aa14.26□□□□□ -0.13
SEMA3B-208ENST00000456210 FAM19A4Q96LR4 140 aa14.26□□□□□ -0.13
SEMA3B-208ENST00000456210 PRO1854Q9UHT4 67 aa14.26□□□□□ -0.13
SEMA3B-208ENST00000456210 TACC2O95359 2948 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms