RNA–Protein interactions for RNA: ENST00000453441.1

COL28A1-205, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

TSL 2

Gene COL28A1, Length 700 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-205ENST00000453441 SMIM7Q9BQ49 75 aa6.2□□□□□ -1.42
COL28A1-205ENST00000453441 CELA1Q9UNI1 258 aa6.2□□□□□ -1.42
COL28A1-205ENST00000453441 TRBV20OR9-2A0A075B6H5 130 aa6.19□□□□□ -1.42
COL28A1-205ENST00000453441 IGKV3D-20A0A0C4DH25 116 aa6.19□□□□□ -1.42
COL28A1-205ENST00000453441 XKRY2A2RUG3 117 aa6.19□□□□□ -1.42
COL28A1-205ENST00000453441 ZNF727A8MUV8 499 aa6.19□□□□□ -1.42
COL28A1-205ENST00000453441 KRBOX1C9JBD0 128 aa6.19□□□□□ -1.42
COL28A1-205ENST00000453441 ZNF561-AS1K7EIQ3 104 aa6.19□□□□□ -1.42
COL28A1-205ENST00000453441 CIDEAO60543 219 aa6.19□□□□□ -1.42
COL28A1-205ENST00000453441 IGLV2-8P01709 118 aa6.19□□□□□ -1.42
COL28A1-205ENST00000453441 PRM2P04554 102 aa6.19□□□□□ -1.42
COL28A1-205ENST00000453441 ATP5G1P05496 136 aa6.19□□□□□ -1.42
COL28A1-205ENST00000453441 MGST1P10620 155 aaKnown RBP6.19□□□□□ -1.42
COL28A1-205ENST00000453441 S100A4P26447 101 aaKnown RBP6.19□□□□□ -1.42
COL28A1-205ENST00000453441 IFITM2Q01629 132 aa6.19□□□□□ -1.42
COL28A1-205ENST00000453441 OR5I1Q13606 314 aa6.19□□□□□ -1.42
COL28A1-205ENST00000453441 Q6ZTC4 211 aa6.19□□□□□ -1.42
COL28A1-205ENST00000453441 NHLRC2Q8NBF2 726 aa6.19□□□□□ -1.42
COL28A1-205ENST00000453441 PCNPQ8WW12 178 aaKnown RBP6.19□□□□□ -1.42
COL28A1-205ENST00000453441 RASL10AQ92737 203 aa6.19□□□□□ -1.42
COL28A1-205ENST00000453441 IL36BQ9NZH7 164 aa6.19□□□□□ -1.42
COL28A1-205ENST00000453441 C11orf21Q9P2W6 132 aa6.19□□□□□ -1.42
COL28A1-205ENST00000453441 TRGV2A0A075B6R0 118 aa6.18□□□□□ -1.42
COL28A1-205ENST00000453441 DEFB131BA0A096LNP1 70 aa6.18□□□□□ -1.42
COL28A1-205ENST00000453441 TRGV1A0A0A0MS02 117 aa6.18□□□□□ -1.42
COL28A1-205ENST00000453441 C19orf71A6NCJ1 209 aa6.18□□□□□ -1.42
COL28A1-205ENST00000453441 GNRH2O43555 120 aa6.18□□□□□ -1.42
COL28A1-205ENST00000453441 P01737 135 aa6.18□□□□□ -1.42
COL28A1-205ENST00000453441 DEFB130BP0DP73 79 aa6.18□□□□□ -1.42
COL28A1-205ENST00000453441 DEFB130AP0DP74 79 aa6.18□□□□□ -1.42
COL28A1-205ENST00000453441 CASC10Q5T4H9 136 aa6.18□□□□□ -1.42
COL28A1-205ENST00000453441 PRR27Q6MZM9 219 aa6.18□□□□□ -1.42
COL28A1-205ENST00000453441 UQCC3Q6UW78 93 aa6.18□□□□□ -1.42
COL28A1-205ENST00000453441 Q6ZQT7 251 aa6.18□□□□□ -1.42
COL28A1-205ENST00000453441 FAM231DQ6ZW35 169 aa6.18□□□□□ -1.42
COL28A1-205ENST00000453441 C9orf85Q96MD7 179 aa6.18□□□□□ -1.42
COL28A1-205ENST00000453441 MDFICQ9P1T7 246 aa6.18□□□□□ -1.42
COL28A1-205ENST00000453441 DYNC2H1Q8NCM8 4307 aaKnown RBP6.17□□□□□ -1.42
COL28A1-205ENST00000453441 MUC4Q99102 2169 aa6.17□□□□□ -1.42
COL28A1-205ENST00000453441 GAGE12BA1L429 117 aa6.17□□□□□ -1.42
COL28A1-205ENST00000453441 M0R036 132 aa6.17□□□□□ -1.42
COL28A1-205ENST00000453441 GAGE7O76087 117 aa6.17□□□□□ -1.42
COL28A1-205ENST00000453441 GAGE12FP0CL80 117 aa6.17□□□□□ -1.42
COL28A1-205ENST00000453441 GAGE12GP0CL81 117 aa6.17□□□□□ -1.42
COL28A1-205ENST00000453441 GAGE12IP0CL82 117 aa6.17□□□□□ -1.42
COL28A1-205ENST00000453441 CEBPGP53567 150 aa6.17□□□□□ -1.42
COL28A1-205ENST00000453441 SLAQ13239 276 aa6.17□□□□□ -1.42
COL28A1-205ENST00000453441 TMEM241Q24JQ0 296 aa6.17□□□□□ -1.42
COL28A1-205ENST00000453441 SOHLH1Q5JUK2 328 aa6.17□□□□□ -1.42
COL28A1-205ENST00000453441 Q6ZTI0 123 aa6.17□□□□□ -1.42
COL28A1-205ENST00000453441 OCC1Q8TAD7 63 aa6.17□□□□□ -1.42
COL28A1-205ENST00000453441 NAT8Q9UHE5 227 aa6.17□□□□□ -1.42
COL28A1-205ENST00000453441 STARD9Q9P2P6 4700 aa6.16□□□□□ -1.42
COL28A1-205ENST00000453441 TRAV4A0A0B4J268 109 aa6.16□□□□□ -1.42
COL28A1-205ENST00000453441 A0A1W2PPQ1 181 aa6.16□□□□□ -1.42
COL28A1-205ENST00000453441 H3BNG1 76 aa6.16□□□□□ -1.42
COL28A1-205ENST00000453441 OR5AL1P0C617 328 aa6.16□□□□□ -1.42
COL28A1-205ENST00000453441 RNASE3P12724 160 aaKnown RBP6.16□□□□□ -1.42
COL28A1-205ENST00000453441 CT83Q5H943 113 aa6.16□□□□□ -1.42
COL28A1-205ENST00000453441 ZFAND6Q6FIF0 208 aa6.16□□□□□ -1.42
COL28A1-205ENST00000453441 LINC01551Q86U37 167 aa6.16□□□□□ -1.42
COL28A1-205ENST00000453441 ZFP82Q8N141 532 aa6.16□□□□□ -1.42
COL28A1-205ENST00000453441 NUDT10Q8NFP7 164 aa6.16□□□□□ -1.42
COL28A1-205ENST00000453441 OR2D3Q8NGH3 330 aa6.16□□□□□ -1.42
COL28A1-205ENST00000453441 NUDT11Q96G61 164 aa6.16□□□□□ -1.42
COL28A1-205ENST00000453441 SCRT2Q9NQ03 307 aa6.16□□□□□ -1.42
COL28A1-205ENST00000453441 PHLDA3Q9Y5J5 127 aa6.16□□□□□ -1.42
COL28A1-205ENST00000453441 PGPEP1LA6NFU8 196 aa6.15□□□□□ -1.42
COL28A1-205ENST00000453441 A8MWV9 139 aa6.15□□□□□ -1.42
COL28A1-205ENST00000453441 F2Z2F3 143 aa6.15□□□□□ -1.42
COL28A1-205ENST00000453441 H3BVH4 76 aa6.15□□□□□ -1.42
COL28A1-205ENST00000453441 SNAI2O43623 268 aa6.15□□□□□ -1.42
COL28A1-205ENST00000453441 ARMS2P0C7Q2 107 aa6.15□□□□□ -1.42
COL28A1-205ENST00000453441 ZNF876PQ49A33 203 aa6.15□□□□□ -1.42
COL28A1-205ENST00000453441 C15orf54Q8N8G6 183 aa6.15□□□□□ -1.42
COL28A1-205ENST00000453441 C15orf53Q8NAA6 179 aa6.15□□□□□ -1.42
COL28A1-205ENST00000453441 KRTAP4-2Q9BYR5 136 aa6.15□□□□□ -1.42
COL28A1-205ENST00000453441 RPP21Q9H633 154 aaKnown RBP6.15□□□□□ -1.42
COL28A1-205ENST00000453441 OSTCQ9NRP0 149 aa6.15□□□□□ -1.42
COL28A1-205ENST00000453441 MRPL16Q9NX20 251 aaKnown RBP6.15□□□□□ -1.42
COL28A1-205ENST00000453441 TMSB15BA0A087X1C1 80 aa6.14□□□□□ -1.43
COL28A1-205ENST00000453441 GRIFINA4D1Z8 144 aa6.14□□□□□ -1.43
COL28A1-205ENST00000453441 FAM231BA6NCW3 169 aa6.14□□□□□ -1.43
COL28A1-205ENST00000453441 A8MWL6 223 aa6.14□□□□□ -1.43
COL28A1-205ENST00000453441 C9JQL5 133 aa6.14□□□□□ -1.43
COL28A1-205ENST00000453441 F5H768 121 aa6.14□□□□□ -1.43
COL28A1-205ENST00000453441 K7EN84 100 aa6.14□□□□□ -1.43
COL28A1-205ENST00000453441 RHODO00212 210 aa6.14□□□□□ -1.43
COL28A1-205ENST00000453441 GATCO43716 136 aaKnown RBP6.14□□□□□ -1.43
COL28A1-205ENST00000453441 HTN3P15516 51 aa6.14□□□□□ -1.43
COL28A1-205ENST00000453441 ERVFC1-1P60608 527 aa6.14□□□□□ -1.43
COL28A1-205ENST00000453441 CACNG7P62955 275 aa6.14□□□□□ -1.43
COL28A1-205ENST00000453441 PNRC1Q12796 327 aaPredicted RBP6.14□□□□□ -1.43
COL28A1-205ENST00000453441 WDR73Q6P4I2 378 aa6.14□□□□□ -1.43
COL28A1-205ENST00000453441 ZFP2Q6ZN57 461 aa6.14□□□□□ -1.43
COL28A1-205ENST00000453441 FER1L6-AS1Q8NA97 138 aa6.14□□□□□ -1.43
COL28A1-205ENST00000453441 OR4C5Q8NGB2 326 aa6.14□□□□□ -1.43
COL28A1-205ENST00000453441 PLECQ15149 4684 aaKnown RBP6.13□□□□□ -1.43
COL28A1-205ENST00000453441 CSMD3Q7Z407 3707 aa6.13□□□□□ -1.43
COL28A1-205ENST00000453441 IGHV4-4A0A075B6R2 117 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms