RNA–Protein interactions for RNA: ENST00000452382.1

PMS1-218, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5

Gene PMS1, Length 881 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-218ENST00000452382 PLXNA2O75051 1894 aa0.88□□□□□ -2.27
PMS1-218ENST00000452382 RIMS1Q86UR5 1692 aaKnown RBP0.88□□□□□ -2.27
PMS1-218ENST00000452382 SMARCA2P51531 1590 aa0.88□□□□□ -2.27
PMS1-218ENST00000452382 FRMPD1Q5SYB0 1578 aa0.88□□□□□ -2.27
PMS1-218ENST00000452382 SPTBP11277 2137 aa0.88□□□□□ -2.27
PMS1-218ENST00000452382 KTN1Q86UP2 1357 aaKnown RBP0.88□□□□□ -2.27
PMS1-218ENST00000452382 LOC100130705A0A1B0GUX0 176 aa0.88□□□□□ -2.27
PMS1-218ENST00000452382 TMEM218A2RU14 115 aa0.88□□□□□ -2.27
PMS1-218ENST00000452382 KLF7O75840 302 aaPredicted RBP0.88□□□□□ -2.27
PMS1-218ENST00000452382 NDUFB6O95139 128 aa0.88□□□□□ -2.27
PMS1-218ENST00000452382 PPYP01298 95 aa0.88□□□□□ -2.27
PMS1-218ENST00000452382 PIRTP0C851 137 aa0.88□□□□□ -2.27
PMS1-218ENST00000452382 SMIM6P0DI80 62 aa0.88□□□□□ -2.27
PMS1-218ENST00000452382 RHOHQ15669 191 aa0.88□□□□□ -2.27
PMS1-218ENST00000452382 Q56UQ5 140 aa0.88□□□□□ -2.27
PMS1-218ENST00000452382 C10orf55Q5SWW7 151 aa0.88□□□□□ -2.27
PMS1-218ENST00000452382 C9orf153Q5TBE3 101 aa0.88□□□□□ -2.27
PMS1-218ENST00000452382 SPANXN1Q5VSR9 72 aa0.88□□□□□ -2.27
PMS1-218ENST00000452382 ZCCHC23Q6ZST2 131 aa0.88□□□□□ -2.27
PMS1-218ENST00000452382 ZNF833PQ6ZTB9 187 aa0.88□□□□□ -2.27
PMS1-218ENST00000452382 VSTM2AQ8TAG5 236 aa0.88□□□□□ -2.27
PMS1-218ENST00000452382 LINC00052Q96N35 136 aa0.88□□□□□ -2.27
PMS1-218ENST00000452382 SNRNP25Q9BV90 132 aaKnown RBP0.88□□□□□ -2.27
PMS1-218ENST00000452382 SPANXDQ9BXN6 97 aa0.88□□□□□ -2.27
PMS1-218ENST00000452382 AGPAT4-IT1Q9H0P7 198 aa0.88□□□□□ -2.27
PMS1-218ENST00000452382 COL24A1Q17RW2 1714 aa0.88□□□□□ -2.27
PMS1-218ENST00000452382 FAM135AQ9P2D6 1515 aa0.88□□□□□ -2.27
PMS1-218ENST00000452382 ARHGAP31Q2M1Z3 1444 aa0.88□□□□□ -2.27
PMS1-218ENST00000452382 STRCQ7RTU9 1775 aa0.88□□□□□ -2.27
PMS1-218ENST00000452382 ESPL1Q14674 2120 aa0.88□□□□□ -2.27
PMS1-218ENST00000452382 ZGRF1Q86YA3 2104 aa0.88□□□□□ -2.27
PMS1-218ENST00000452382 USP54Q70EL1 1684 aa0.88□□□□□ -2.27
PMS1-218ENST00000452382 TCHHQ07283 1943 aa0.87□□□□□ -2.27
PMS1-218ENST00000452382 SIP14410 1827 aa0.87□□□□□ -2.27
PMS1-218ENST00000452382 SPAARA0A1B0GVQ0 90 aa0.87□□□□□ -2.27
PMS1-218ENST00000452382 TRBV6-4A0A1B0GX49 114 aa0.87□□□□□ -2.27
PMS1-218ENST00000452382 TCRBV3S1A0A5B6 114 aa0.87□□□□□ -2.27
PMS1-218ENST00000452382 FAM24AA6NFZ4 105 aa0.87□□□□□ -2.27
PMS1-218ENST00000452382 MCRIP1C9JLW8 97 aa0.87□□□□□ -2.27
PMS1-218ENST00000452382 CCDC179H3BU77 68 aa0.87□□□□□ -2.27
PMS1-218ENST00000452382 IGKCP01834 107 aa0.87□□□□□ -2.27
PMS1-218ENST00000452382 TFF1P04155 84 aa0.87□□□□□ -2.27
PMS1-218ENST00000452382 S100A8P05109 93 aa0.87□□□□□ -2.27
PMS1-218ENST00000452382 CNBPP62633 177 aaKnown RBP0.87□□□□□ -2.27
PMS1-218ENST00000452382 CATR1Q13166 79 aa0.87□□□□□ -2.27
PMS1-218ENST00000452382 MPV17LQ2QL34 196 aa0.87□□□□□ -2.27
PMS1-218ENST00000452382 LINC00299Q6ZSB3 139 aa0.87□□□□□ -2.27
PMS1-218ENST00000452382 C8orf59Q8N0T1 100 aaPredicted RBP0.87□□□□□ -2.27
PMS1-218ENST00000452382 PPDPFLQ8WWR9 84 aa0.87□□□□□ -2.27
PMS1-218ENST00000452382 C14orf144Q96I85 54 aa0.87□□□□□ -2.27
PMS1-218ENST00000452382 ATG5Q9H1Y0 275 aa0.87□□□□□ -2.27
PMS1-218ENST00000452382 RPRMQ9NS64 109 aa0.87□□□□□ -2.27
PMS1-218ENST00000452382 SERP1Q9Y6X1 66 aa0.87□□□□□ -2.27
PMS1-218ENST00000452382 KIDINS220Q9ULH0 1771 aa0.87□□□□□ -2.27
PMS1-218ENST00000452382 MYOM3Q5VTT5 1437 aa0.87□□□□□ -2.27
PMS1-218ENST00000452382 KIAA1549LQ6ZVL6 1849 aa0.87□□□□□ -2.27
PMS1-218ENST00000452382 MYH8P13535 1937 aa0.86□□□□□ -2.27
PMS1-218ENST00000452382 DLG5Q8TDM6 1919 aa0.86□□□□□ -2.27
PMS1-218ENST00000452382 IGLV3-32A0A0A0MS00 114 aa0.86□□□□□ -2.27
PMS1-218ENST00000452382 TRBV6-7A0A0A0MS04 114 aa0.86□□□□□ -2.27
PMS1-218ENST00000452382 TRAV2A0A0B4J234 112 aa0.86□□□□□ -2.27
PMS1-218ENST00000452382 A6NN06 94 aa0.86□□□□□ -2.27
PMS1-218ENST00000452382 JMJD7-PLA2G4BH0Y9G9 81 aa0.86□□□□□ -2.27
PMS1-218ENST00000452382 NUPR1O60356 82 aa0.86□□□□□ -2.27
PMS1-218ENST00000452382 IFNA17P01571 189 aa0.86□□□□□ -2.27
PMS1-218ENST00000452382 IFITM1P13164 125 aa0.86□□□□□ -2.27
PMS1-218ENST00000452382 IL9P15248 144 aa0.86□□□□□ -2.27
PMS1-218ENST00000452382 S100A10P60903 97 aa0.86□□□□□ -2.27
PMS1-218ENST00000452382 NPC2P61916 151 aa0.86□□□□□ -2.27
PMS1-218ENST00000452382 UBE2G1P62253 170 aa0.86□□□□□ -2.27
PMS1-218ENST00000452382 BTG2P78543 158 aa0.86□□□□□ -2.27
PMS1-218ENST00000452382 RBM3P98179 157 aaKnown RBP0.86□□□□□ -2.27
PMS1-218ENST00000452382 LYPD5Q6UWN5 251 aa0.86□□□□□ -2.27
PMS1-218ENST00000452382 SPTSSBQ8NFR3 76 aa0.86□□□□□ -2.27
PMS1-218ENST00000452382 PATE1Q8WXA2 126 aa0.86□□□□□ -2.27
PMS1-218ENST00000452382 TMEM141Q96I45 108 aa0.86□□□□□ -2.27
PMS1-218ENST00000452382 MRPL57Q9BQC6 102 aaKnown RBP0.86□□□□□ -2.27
PMS1-218ENST00000452382 MRPL35Q9NZE8 188 aaKnown RBP0.86□□□□□ -2.27
PMS1-218ENST00000452382 MRPL36Q9P0J6 103 aaKnown RBP0.86□□□□□ -2.27
PMS1-218ENST00000452382 NDUFA12Q9UI09 145 aa0.86□□□□□ -2.27
PMS1-218ENST00000452382 CASZ1Q86V15 1759 aa0.85□□□□□ -2.27
PMS1-218ENST00000452382 SPAG17Q6Q759 2223 aa0.85□□□□□ -2.27
PMS1-218ENST00000452382 IGKV3D-7A0A0C4DH55 119 aa0.85□□□□□ -2.27
PMS1-218ENST00000452382 IGKV3OR2-268A0A0C4DH90 116 aa0.85□□□□□ -2.27
PMS1-218ENST00000452382 M0R143 59 aa0.85□□□□□ -2.27
PMS1-218ENST00000452382 CCL25O15444 150 aa0.85□□□□□ -2.27
PMS1-218ENST00000452382 TNFP01375 233 aa0.85□□□□□ -2.27
PMS1-218ENST00000452382 IGHV3-33P01772 117 aa0.85□□□□□ -2.27
PMS1-218ENST00000452382 GYPBP06028 91 aa0.85□□□□□ -2.27
PMS1-218ENST00000452382 SPINK8P0C7L1 97 aa0.85□□□□□ -2.27
PMS1-218ENST00000452382 SLC25A6P12236 298 aa0.85□□□□□ -2.27
PMS1-218ENST00000452382 CBLN1P23435 193 aa0.85□□□□□ -2.27
PMS1-218ENST00000452382 HSD52Q0P140 79 aa0.85□□□□□ -2.27
PMS1-218ENST00000452382 DOCK1Q14185 1865 aa0.85□□□□□ -2.27
PMS1-218ENST00000452382 SPATA45Q537H7 98 aa0.85□□□□□ -2.27
PMS1-218ENST00000452382 C12orf73Q69YU5 71 aa0.85□□□□□ -2.27
PMS1-218ENST00000452382 CSAG1Q6PB30 78 aa0.85□□□□□ -2.27
PMS1-218ENST00000452382 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP0.85□□□□□ -2.27
PMS1-218ENST00000452382 Q8N2B8 174 aa0.85□□□□□ -2.27
PMS1-218ENST00000452382 C15orf53Q8NAA6 179 aa0.85□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms