RNA–Protein interactions for RNA: ENST00000450867.1

COL3A1-203, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL3A1, Length 268 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-203ENST00000450867 GNG4P50150 75 aa10.01□□□□□ -0.81
COL3A1-203ENST00000450867 ZNF876PQ49A33 203 aa10.01□□□□□ -0.81
COL3A1-203ENST00000450867 ZNF479Q96JC4 524 aa10.01□□□□□ -0.81
COL3A1-203ENST00000450867 FAM210AQ96ND0 272 aa10.01□□□□□ -0.81
COL3A1-203ENST00000450867 PRO0255Q9UI72 69 aa10.01□□□□□ -0.81
COL3A1-203ENST00000450867 RAB19A4D1S5 217 aa10□□□□□ -0.81
COL3A1-203ENST00000450867 PGPEP1LA6NFU8 196 aa10□□□□□ -0.81
COL3A1-203ENST00000450867 C9JCJ5 164 aa10□□□□□ -0.81
COL3A1-203ENST00000450867 M0R036 132 aa10□□□□□ -0.81
COL3A1-203ENST00000450867 RS1O15537 224 aa10□□□□□ -0.81
COL3A1-203ENST00000450867 MED14OSP0DP75 135 aa10□□□□□ -0.81
COL3A1-203ENST00000450867 C19orf71A6NCJ1 209 aa9.99□□□□□ -0.81
COL3A1-203ENST00000450867 S100A4P26447 101 aaKnown RBP9.99□□□□□ -0.81
COL3A1-203ENST00000450867 CRYBA4P53673 196 aa9.99□□□□□ -0.81
COL3A1-203ENST00000450867 FAM3BP58499 235 aaPredicted RBP9.99□□□□□ -0.81
COL3A1-203ENST00000450867 CFAP126Q5VTH2 177 aa9.99□□□□□ -0.81
COL3A1-203ENST00000450867 OR4C5Q8NGB2 326 aa9.99□□□□□ -0.81
COL3A1-203ENST00000450867 H3BVH4 76 aa9.98□□□□□ -0.81
COL3A1-203ENST00000450867 NUDT3O95989 172 aa9.98□□□□□ -0.81
COL3A1-203ENST00000450867 IGHV3-53P01767 116 aa9.98□□□□□ -0.81
COL3A1-203ENST00000450867 SFTA3P0C7M3 94 aa9.98□□□□□ -0.81
COL3A1-203ENST00000450867 ARMS2P0C7Q2 107 aa9.98□□□□□ -0.81
COL3A1-203ENST00000450867 TOR2AQ5JU69 321 aa9.98□□□□□ -0.81
COL3A1-203ENST00000450867 PARLQ9H300 379 aa9.98□□□□□ -0.81
COL3A1-203ENST00000450867 BIN3Q9NQY0 253 aa9.98□□□□□ -0.81
COL3A1-203ENST00000450867 HHLA3Q9XRX5 114 aa9.98□□□□□ -0.81
COL3A1-203ENST00000450867 FRAS1Q86XX4 4008 aa9.97□□□□□ -0.81
COL3A1-203ENST00000450867 A0A0J9YY99 117 aa9.97□□□□□ -0.81
COL3A1-203ENST00000450867 GRIFINA4D1Z8 144 aa9.97□□□□□ -0.81
COL3A1-203ENST00000450867 NXPH4O95158 308 aa9.97□□□□□ -0.81
COL3A1-203ENST00000450867 GATA1P15976 413 aaPredicted RBP9.97□□□□□ -0.81
COL3A1-203ENST00000450867 RPL19P84098 196 aaKnown RBP9.97□□□□□ -0.81
COL3A1-203ENST00000450867 PRR27Q6MZM9 219 aa9.97□□□□□ -0.81
COL3A1-203ENST00000450867 SSBP4Q9BWG4 385 aaPredicted RBP9.97□□□□□ -0.81
COL3A1-203ENST00000450867 DNAH10Q8IVF4 4471 aa9.97□□□□□ -0.81
COL3A1-203ENST00000450867 A0A096LPF7 62 aa9.96□□□□□ -0.82
COL3A1-203ENST00000450867 TRGV4A0A0C4DH28 118 aa9.96□□□□□ -0.82
COL3A1-203ENST00000450867 A8MWV9 139 aa9.96□□□□□ -0.82
COL3A1-203ENST00000450867 PAX4O43316 350 aa9.96□□□□□ -0.82
COL3A1-203ENST00000450867 SNAI2O43623 268 aa9.96□□□□□ -0.82
COL3A1-203ENST00000450867 OR5AL1P0C617 328 aa9.96□□□□□ -0.82
COL3A1-203ENST00000450867 UFSP1Q6NVU6 142 aa9.96□□□□□ -0.82
COL3A1-203ENST00000450867 ZFP2Q6ZN57 461 aa9.96□□□□□ -0.82
COL3A1-203ENST00000450867 EIF5A2Q9GZV4 153 aaKnown RBP9.96□□□□□ -0.82
COL3A1-203ENST00000450867 TMSB15BA0A087X1C1 80 aa9.95□□□□□ -0.82
COL3A1-203ENST00000450867 SRP19P09132 144 aaKnown RBP9.95□□□□□ -0.82
COL3A1-203ENST00000450867 MGST1P10620 155 aaKnown RBP9.95□□□□□ -0.82
COL3A1-203ENST00000450867 DMRTA1Q5VZB9 504 aa9.95□□□□□ -0.82
COL3A1-203ENST00000450867 SYT8Q8NBV8 401 aa9.95□□□□□ -0.82
COL3A1-203ENST00000450867 ICOSQ9Y6W8 199 aa9.95□□□□□ -0.82
COL3A1-203ENST00000450867 LY96Q9Y6Y9 160 aa9.95□□□□□ -0.82
COL3A1-203ENST00000450867 TRBV6-4A0A1B0GX49 114 aa9.94□□□□□ -0.82
COL3A1-203ENST00000450867 K7EN84 100 aa9.94□□□□□ -0.82
COL3A1-203ENST00000450867 IGLC6P0CF74 106 aa9.94□□□□□ -0.82
COL3A1-203ENST00000450867 CCL18P55774 89 aa9.94□□□□□ -0.82
COL3A1-203ENST00000450867 RPS20P60866 119 aaKnown RBP9.94□□□□□ -0.82
COL3A1-203ENST00000450867 MRPL23Q16540 153 aaKnown RBP9.94□□□□□ -0.82
COL3A1-203ENST00000450867 UBE2DNLQ8IWF7 75 aa9.94□□□□□ -0.82
COL3A1-203ENST00000450867 ZFP82Q8N141 532 aa9.94□□□□□ -0.82
COL3A1-203ENST00000450867 OCC1Q8TAD7 63 aa9.94□□□□□ -0.82
COL3A1-203ENST00000450867 SMDT1Q9H4I9 107 aa9.94□□□□□ -0.82
COL3A1-203ENST00000450867 LINC00588Q9Y4M8 146 aa9.94□□□□□ -0.82
COL3A1-203ENST00000450867 PHLDA3Q9Y5J5 127 aa9.94□□□□□ -0.82
COL3A1-203ENST00000450867 ZNRF2Q8NHG8 242 aa9.93□□□□□ -0.82
COL3A1-203ENST00000450867 PCNPQ8WW12 178 aaKnown RBP9.93□□□□□ -0.82
COL3A1-203ENST00000450867 DAZAP1Q96EP5 407 aaKnown RBP9.93□□□□□ -0.82
COL3A1-203ENST00000450867 SFRP2Q96HF1 295 aa9.93□□□□□ -0.82
COL3A1-203ENST00000450867 UPK3BQ9BT76 320 aa9.93□□□□□ -0.82
COL3A1-203ENST00000450867 K7EQD1 137 aa9.92□□□□□ -0.82
COL3A1-203ENST00000450867 RHODO00212 210 aa9.92□□□□□ -0.82
COL3A1-203ENST00000450867 P01737 135 aa9.92□□□□□ -0.82
COL3A1-203ENST00000450867 ESRGQ1W209 222 aa9.92□□□□□ -0.82
COL3A1-203ENST00000450867 FAM231DQ6ZW35 169 aa9.92□□□□□ -0.82
COL3A1-203ENST00000450867 SLC25A29Q8N8R3 303 aa9.92□□□□□ -0.82
COL3A1-203ENST00000450867 NUDT10Q8NFP7 164 aa9.92□□□□□ -0.82
COL3A1-203ENST00000450867 OR2D3Q8NGH3 330 aa9.92□□□□□ -0.82
COL3A1-203ENST00000450867 OR10AG1Q8NH19 301 aa9.92□□□□□ -0.82
COL3A1-203ENST00000450867 NUDT11Q96G61 164 aa9.92□□□□□ -0.82
COL3A1-203ENST00000450867 SMIM7Q9BQ49 75 aa9.92□□□□□ -0.82
COL3A1-203ENST00000450867 JPT2Q9H910 190 aa9.92□□□□□ -0.82
COL3A1-203ENST00000450867 MRPS16Q9Y3D3 137 aaKnown RBP9.92□□□□□ -0.82
COL3A1-203ENST00000450867 DNAH17Q9UFH2 4485 aa9.92□□□□□ -0.82
COL3A1-203ENST00000450867 DNAH2Q9P225 4427 aa9.91□□□□□ -0.82
COL3A1-203ENST00000450867 CRYGDP07320 174 aa9.91□□□□□ -0.82
COL3A1-203ENST00000450867 GYPEP15421 78 aa9.91□□□□□ -0.82
COL3A1-203ENST00000450867 RHOHQ15669 191 aa9.91□□□□□ -0.82
COL3A1-203ENST00000450867 Q6ZR54 194 aa9.91□□□□□ -0.82
COL3A1-203ENST00000450867 XKRY2A2RUG3 117 aa9.9□□□□□ -0.82
COL3A1-203ENST00000450867 M0R381 172 aa9.9□□□□□ -0.82
COL3A1-203ENST00000450867 FAM74A3Q4VXF1 159 aa9.9□□□□□ -0.82
COL3A1-203ENST00000450867 NEGR1Q7Z3B1 354 aa9.9□□□□□ -0.82
COL3A1-203ENST00000450867 SH2D6Q7Z4S9 175 aa9.9□□□□□ -0.82
COL3A1-203ENST00000450867 SAMD10Q9BYL1 202 aa9.9□□□□□ -0.82
COL3A1-203ENST00000450867 C9JQL5 133 aa9.89□□□□□ -0.83
COL3A1-203ENST00000450867 LINC00694P0DN24 101 aa9.89□□□□□ -0.83
COL3A1-203ENST00000450867 SRIP30626 198 aa9.89□□□□□ -0.83
COL3A1-203ENST00000450867 TIRAPP58753 221 aa9.89□□□□□ -0.83
COL3A1-203ENST00000450867 Q6ZSN1 163 aa9.89□□□□□ -0.83
COL3A1-203ENST00000450867 LINC01551Q86U37 167 aa9.89□□□□□ -0.83
COL3A1-203ENST00000450867 FER1L6-AS1Q8NA97 138 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms