RNA–Protein interactions for RNA: ENST00000449415.5

RFTN1-205, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS ALT2 TSL 3

Gene RFTN1, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-205ENST00000449415 SOHLH1Q5JUK2 328 aa12.38□□□□□ -0.43
RFTN1-205ENST00000449415 C9orf62Q8N4C0 152 aa12.38□□□□□ -0.43
RFTN1-205ENST00000449415 UPK3BQ9BT76 320 aa12.38□□□□□ -0.43
RFTN1-205ENST00000449415 LOC100131303A0A0U1RQF7 123 aa12.37□□□□□ -0.43
RFTN1-205ENST00000449415 A0A1B0GVG6 124 aa12.37□□□□□ -0.43
RFTN1-205ENST00000449415 KRBOX1C9JBD0 128 aa12.37□□□□□ -0.43
RFTN1-205ENST00000449415 H3BVH4 76 aa12.37□□□□□ -0.43
RFTN1-205ENST00000449415 K7EQD1 137 aa12.37□□□□□ -0.43
RFTN1-205ENST00000449415 RS1O15537 224 aa12.37□□□□□ -0.43
RFTN1-205ENST00000449415 SRIP30626 198 aa12.37□□□□□ -0.43
RFTN1-205ENST00000449415 CFAP126Q5VTH2 177 aa12.37□□□□□ -0.43
RFTN1-205ENST00000449415 COX8CQ7Z4L0 72 aa12.37□□□□□ -0.43
RFTN1-205ENST00000449415 MANBALQ9NQG1 85 aa12.37□□□□□ -0.43
RFTN1-205ENST00000449415 TRAV1-1A0A0B4J248 108 aa12.36□□□□□ -0.43
RFTN1-205ENST00000449415 TEX46H3BTG2 121 aa12.36□□□□□ -0.43
RFTN1-205ENST00000449415 S100A9P06702 114 aaKnown RBP12.36□□□□□ -0.43
RFTN1-205ENST00000449415 ZNF674Q2M3X9 581 aa12.36□□□□□ -0.43
RFTN1-205ENST00000449415 LYPD5Q6UWN5 251 aa12.36□□□□□ -0.43
RFTN1-205ENST00000449415 NEGR1Q7Z3B1 354 aa12.36□□□□□ -0.43
RFTN1-205ENST00000449415 GATA1P15976 413 aaPredicted RBP12.35□□□□□ -0.43
RFTN1-205ENST00000449415 BAGE2Q86Y30 109 aa12.35□□□□□ -0.43
RFTN1-205ENST00000449415 KRTAP1-5Q9BYS1 174 aa12.35□□□□□ -0.43
RFTN1-205ENST00000449415 NXPH4O95158 308 aa12.34□□□□□ -0.43
RFTN1-205ENST00000449415 ARMS2P0C7Q2 107 aa12.34□□□□□ -0.43
RFTN1-205ENST00000449415 C6orf223Q8N319 242 aa12.34□□□□□ -0.43
RFTN1-205ENST00000449415 PTH2Q96A98 100 aa12.34□□□□□ -0.43
RFTN1-205ENST00000449415 DERL1Q9BUN8 251 aa12.34□□□□□ -0.43
RFTN1-205ENST00000449415 IL36BQ9NZH7 164 aa12.34□□□□□ -0.43
RFTN1-205ENST00000449415 RPL35P42766 123 aaKnown RBP12.33□□□□□ -0.44
RFTN1-205ENST00000449415 LINC01559Q495D7 138 aa12.33□□□□□ -0.44
RFTN1-205ENST00000449415 PRR27Q6MZM9 219 aa12.33□□□□□ -0.44
RFTN1-205ENST00000449415 SLC25A29Q8N8R3 303 aa12.33□□□□□ -0.44
RFTN1-205ENST00000449415 JPT2Q9H910 190 aa12.33□□□□□ -0.44
RFTN1-205ENST00000449415 A0A1B0GVY2 172 aa12.32□□□□□ -0.44
RFTN1-205ENST00000449415 SIVA1O15304 175 aa12.32□□□□□ -0.44
RFTN1-205ENST00000449415 NKX2-5P52952 324 aaPredicted RBP12.32□□□□□ -0.44
RFTN1-205ENST00000449415 RPL19P84098 196 aaKnown RBP12.32□□□□□ -0.44
RFTN1-205ENST00000449415 TTC32Q5I0X7 151 aa12.32□□□□□ -0.44
RFTN1-205ENST00000449415 DMRTA1Q5VZB9 504 aa12.32□□□□□ -0.44
RFTN1-205ENST00000449415 TXNDC17Q9BRA2 123 aa12.32□□□□□ -0.44
RFTN1-205ENST00000449415 DNAH2Q9P225 4427 aa12.31□□□□□ -0.44
RFTN1-205ENST00000449415 IFNA1P01562 189 aa12.31□□□□□ -0.44
RFTN1-205ENST00000449415 DNLZQ5SXM8 178 aa12.31□□□□□ -0.44
RFTN1-205ENST00000449415 ALKAL2Q6UX46 152 aa12.31□□□□□ -0.44
RFTN1-205ENST00000449415 ZNF575Q86XF7 245 aa12.31□□□□□ -0.44
RFTN1-205ENST00000449415 C11orf52Q96A22 123 aa12.31□□□□□ -0.44
RFTN1-205ENST00000449415 MLST8Q9BVC4 326 aa12.31□□□□□ -0.44
RFTN1-205ENST00000449415 PARLQ9H300 379 aa12.31□□□□□ -0.44
RFTN1-205ENST00000449415 A8MWV9 139 aa12.3□□□□□ -0.44
RFTN1-205ENST00000449415 CIDEAO60543 219 aa12.3□□□□□ -0.44
RFTN1-205ENST00000449415 Q6ZSN1 163 aa12.3□□□□□ -0.44
RFTN1-205ENST00000449415 SYT8Q8NBV8 401 aa12.3□□□□□ -0.44
RFTN1-205ENST00000449415 PRADC1Q9BSG0 188 aa12.3□□□□□ -0.44
RFTN1-205ENST00000449415 SAMD10Q9BYL1 202 aa12.3□□□□□ -0.44
RFTN1-205ENST00000449415 PHLDA3Q9Y5J5 127 aa12.3□□□□□ -0.44
RFTN1-205ENST00000449415 DNAH17Q9UFH2 4485 aa12.3□□□□□ -0.44
RFTN1-205ENST00000449415 TRBV6-4A0A1B0GX49 114 aa12.29□□□□□ -0.44
RFTN1-205ENST00000449415 M0R381 172 aa12.29□□□□□ -0.44
RFTN1-205ENST00000449415 MEF2BQ02080 365 aaPredicted RBP12.29□□□□□ -0.44
RFTN1-205ENST00000449415 TNP2Q05952 138 aa12.29□□□□□ -0.44
RFTN1-205ENST00000449415 RHOHQ15669 191 aa12.29□□□□□ -0.44
RFTN1-205ENST00000449415 CENPWQ5EE01 88 aa12.29□□□□□ -0.44
RFTN1-205ENST00000449415 A0A1W2PPQ1 181 aa12.28□□□□□ -0.44
RFTN1-205ENST00000449415 RAB19A4D1S5 217 aa12.28□□□□□ -0.44
RFTN1-205ENST00000449415 BCL2P10415 239 aa12.28□□□□□ -0.44
RFTN1-205ENST00000449415 MGST1P10620 155 aaKnown RBP12.28□□□□□ -0.44
RFTN1-205ENST00000449415 WFDC10BQ8IUB3 73 aa12.28□□□□□ -0.44
RFTN1-205ENST00000449415 MED9Q9NWA0 146 aa12.28□□□□□ -0.44
RFTN1-205ENST00000449415 BOLA1Q9Y3E2 137 aa12.28□□□□□ -0.44
RFTN1-205ENST00000449415 HECTD4Q9Y4D8 3996 aa12.28□□□□□ -0.44
RFTN1-205ENST00000449415 PIK3CD-AS1Q5SR53 167 aa12.27□□□□□ -0.45
RFTN1-205ENST00000449415 FAM74A4Q5TZK3 123 aa12.27□□□□□ -0.45
RFTN1-205ENST00000449415 SCRT2Q9NQ03 307 aa12.27□□□□□ -0.45
RFTN1-205ENST00000449415 VAX2Q9UIW0 290 aa12.27□□□□□ -0.45
RFTN1-205ENST00000449415 A0A087WWL8 130 aa12.26□□□□□ -0.45
RFTN1-205ENST00000449415 PDE6DO43924 150 aa12.26□□□□□ -0.45
RFTN1-205ENST00000449415 ZFP2Q6ZN57 461 aa12.26□□□□□ -0.45
RFTN1-205ENST00000449415 SH2D6Q7Z4S9 175 aa12.26□□□□□ -0.45
RFTN1-205ENST00000449415 ZFP82Q8N141 532 aa12.26□□□□□ -0.45
RFTN1-205ENST00000449415 FAT2Q9NYQ8 4349 aa12.26□□□□□ -0.45
RFTN1-205ENST00000449415 MUC21A0A0G2JKD1 596 aa12.25□□□□□ -0.45
RFTN1-205ENST00000449415 MUC21A0A140T8X8 626 aa12.25□□□□□ -0.45
RFTN1-205ENST00000449415 GAGE12JA6NER3 117 aa12.25□□□□□ -0.45
RFTN1-205ENST00000449415 IGLV2-8P01709 118 aa12.25□□□□□ -0.45
RFTN1-205ENST00000449415 GNG4P50150 75 aa12.25□□□□□ -0.45
RFTN1-205ENST00000449415 GAGE1Q13065 139 aa12.25□□□□□ -0.45
RFTN1-205ENST00000449415 GAGE4Q13068 117 aa12.25□□□□□ -0.45
RFTN1-205ENST00000449415 GAGE5Q13069 117 aa12.25□□□□□ -0.45
RFTN1-205ENST00000449415 GAGE13Q4V321 117 aa12.25□□□□□ -0.45
RFTN1-205ENST00000449415 UFSP1Q6NVU6 142 aa12.25□□□□□ -0.45
RFTN1-205ENST00000449415 C14orf178Q8N769 122 aaPredicted RBP12.25□□□□□ -0.45
RFTN1-205ENST00000449415 SFRP2Q96HF1 295 aa12.25□□□□□ -0.45
RFTN1-205ENST00000449415 LY96Q9Y6Y9 160 aa12.25□□□□□ -0.45
RFTN1-205ENST00000449415 LINC00315P59091 139 aa12.24□□□□□ -0.45
RFTN1-205ENST00000449415 SSTP61278 116 aa12.24□□□□□ -0.45
RFTN1-205ENST00000449415 BLOC1S1P78537 153 aa12.24□□□□□ -0.45
RFTN1-205ENST00000449415 OR10AG1Q8NH19 301 aa12.24□□□□□ -0.45
RFTN1-205ENST00000449415 Q9UF83 564 aa12.24□□□□□ -0.45
RFTN1-205ENST00000449415 RHODO00212 210 aa12.23□□□□□ -0.45
RFTN1-205ENST00000449415 ATP6V0E2Q8NHE4 81 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms