RNA–Protein interactions for RNA: ENST00000448450.5

HTATSF1-203, Transcript of HIV-1 Tat specific factor 1, humanhuman

TSL 5

Gene HTATSF1, Length 1,014 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTATSF1-203ENST00000448450 ZNF876PQ49A33 203 aa17.34■□□□□ 0.37
HTATSF1-203ENST00000448450 SOHLH1Q5JUK2 328 aa17.34■□□□□ 0.37
HTATSF1-203ENST00000448450 FAM162BQ5T6X4 162 aa17.34■□□□□ 0.37
HTATSF1-203ENST00000448450 C9orf85Q96MD7 179 aa17.34■□□□□ 0.37
HTATSF1-203ENST00000448450 B4DEV8 164 aa17.33■□□□□ 0.36
HTATSF1-203ENST00000448450 S100A9P06702 114 aaKnown RBP17.33■□□□□ 0.36
HTATSF1-203ENST00000448450 S100A4P26447 101 aaKnown RBP17.33■□□□□ 0.36
HTATSF1-203ENST00000448450 NKX2-5P52952 324 aaPredicted RBP17.33■□□□□ 0.36
HTATSF1-203ENST00000448450 COX8CQ7Z4L0 72 aa17.33■□□□□ 0.36
HTATSF1-203ENST00000448450 ZNRF2Q8NHG8 242 aa17.32■□□□□ 0.36
HTATSF1-203ENST00000448450 ICOSQ9Y6W8 199 aa17.32■□□□□ 0.36
HTATSF1-203ENST00000448450 PGPEP1LA6NFU8 196 aa17.31■□□□□ 0.36
HTATSF1-203ENST00000448450 ASIPP42127 132 aa17.31■□□□□ 0.36
HTATSF1-203ENST00000448450 Q6ZR54 194 aa17.31■□□□□ 0.36
HTATSF1-203ENST00000448450 BAGE2Q86Y30 109 aa17.31■□□□□ 0.36
HTATSF1-203ENST00000448450 TMSB15BA0A087X1C1 80 aa17.3■□□□□ 0.36
HTATSF1-203ENST00000448450 GRIFINA4D1Z8 144 aa17.3■□□□□ 0.36
HTATSF1-203ENST00000448450 KRBOX1C9JBD0 128 aa17.3■□□□□ 0.36
HTATSF1-203ENST00000448450 ZNF674Q2M3X9 581 aa17.3■□□□□ 0.36
HTATSF1-203ENST00000448450 ZNF506Q5JVG8 444 aa17.29■□□□□ 0.36
HTATSF1-203ENST00000448450 ALKAL2Q6UX46 152 aa17.29■□□□□ 0.36
HTATSF1-203ENST00000448450 ZNF575Q86XF7 245 aa17.29■□□□□ 0.36
HTATSF1-203ENST00000448450 BOLA1Q9Y3E2 137 aa17.29■□□□□ 0.36
HTATSF1-203ENST00000448450 H3BVH4 76 aa17.28■□□□□ 0.36
HTATSF1-203ENST00000448450 IGHV3-73A0A0B4J1V6 119 aa17.27■□□□□ 0.36
HTATSF1-203ENST00000448450 RS1O15537 224 aa17.27■□□□□ 0.36
HTATSF1-203ENST00000448450 RPL35P42766 123 aaKnown RBP17.27■□□□□ 0.36
HTATSF1-203ENST00000448450 MRPL23Q16540 153 aaKnown RBP17.27■□□□□ 0.36
HTATSF1-203ENST00000448450 CFAP126Q5VTH2 177 aa17.27■□□□□ 0.36
HTATSF1-203ENST00000448450 DERL1Q9BUN8 251 aa17.27■□□□□ 0.36
HTATSF1-203ENST00000448450 Q9H8V8 135 aa17.27■□□□□ 0.36
HTATSF1-203ENST00000448450 IFNA1P01562 189 aa17.26■□□□□ 0.35
HTATSF1-203ENST00000448450 GYPEP15421 78 aa17.26■□□□□ 0.35
HTATSF1-203ENST00000448450 PTH2Q96A98 100 aa17.26■□□□□ 0.35
HTATSF1-203ENST00000448450 ARMS2P0C7Q2 107 aa17.25■□□□□ 0.35
HTATSF1-203ENST00000448450 C1orf134Q5TEV5 83 aa17.25■□□□□ 0.35
HTATSF1-203ENST00000448450 PCNPQ8WW12 178 aaKnown RBP17.25■□□□□ 0.35
HTATSF1-203ENST00000448450 C11orf52Q96A22 123 aa17.25■□□□□ 0.35
HTATSF1-203ENST00000448450 TXNDC17Q9BRA2 123 aa17.25■□□□□ 0.35
HTATSF1-203ENST00000448450 MLST8Q9BVC4 326 aa17.25■□□□□ 0.35
HTATSF1-203ENST00000448450 IL36BQ9NZH7 164 aa17.25■□□□□ 0.35
HTATSF1-203ENST00000448450 MRPS16Q9Y3D3 137 aaKnown RBP17.25■□□□□ 0.35
HTATSF1-203ENST00000448450 NBDYA0A0U1RRE5 68 aa17.24■□□□□ 0.35
HTATSF1-203ENST00000448450 K7EQD1 137 aa17.24■□□□□ 0.35
HTATSF1-203ENST00000448450 GATA1P15976 413 aaPredicted RBP17.24■□□□□ 0.35
HTATSF1-203ENST00000448450 MEF2BQ02080 365 aaPredicted RBP17.24■□□□□ 0.35
HTATSF1-203ENST00000448450 LINC01559Q495D7 138 aa17.24■□□□□ 0.35
HTATSF1-203ENST00000448450 PRR27Q6MZM9 219 aa17.24■□□□□ 0.35
HTATSF1-203ENST00000448450 LOC100131303A0A0U1RQF7 123 aa17.23■□□□□ 0.35
HTATSF1-203ENST00000448450 BCL2P10415 239 aa17.23■□□□□ 0.35
HTATSF1-203ENST00000448450 SRIP30626 198 aa17.23■□□□□ 0.35
HTATSF1-203ENST00000448450 KRTAP4-5Q9BYR2 181 aa17.23■□□□□ 0.35
HTATSF1-203ENST00000448450 RAB19A4D1S5 217 aa17.22■□□□□ 0.35
HTATSF1-203ENST00000448450 RPL19P84098 196 aaKnown RBP17.22■□□□□ 0.35
HTATSF1-203ENST00000448450 DNLZQ5SXM8 178 aa17.22■□□□□ 0.35
HTATSF1-203ENST00000448450 LYPD5Q6UWN5 251 aa17.22■□□□□ 0.35
HTATSF1-203ENST00000448450 NEGR1Q7Z3B1 354 aa17.22■□□□□ 0.35
HTATSF1-203ENST00000448450 MED9Q9NWA0 146 aa17.22■□□□□ 0.35
HTATSF1-203ENST00000448450 HSPG2P98160 4391 aa17.21■□□□□ 0.35
HTATSF1-203ENST00000448450 DMRTA1Q5VZB9 504 aa17.21■□□□□ 0.35
HTATSF1-203ENST00000448450 UPK3BQ9BT76 320 aa17.21■□□□□ 0.35
HTATSF1-203ENST00000448450 JPT2Q9H910 190 aa17.21■□□□□ 0.35
HTATSF1-203ENST00000448450 VAX2Q9UIW0 290 aa17.21■□□□□ 0.35
HTATSF1-203ENST00000448450 PDE6DO43924 150 aa17.2■□□□□ 0.34
HTATSF1-203ENST00000448450 BLOC1S1P78537 153 aa17.2■□□□□ 0.34
HTATSF1-203ENST00000448450 CENPWQ5EE01 88 aa17.2■□□□□ 0.34
HTATSF1-203ENST00000448450 SLC25A29Q8N8R3 303 aa17.2■□□□□ 0.34
HTATSF1-203ENST00000448450 PHLDA3Q9Y5J5 127 aa17.2■□□□□ 0.34
HTATSF1-203ENST00000448450 SYT8Q8NBV8 401 aa17.19■□□□□ 0.34
HTATSF1-203ENST00000448450 PARLQ9H300 379 aa17.19■□□□□ 0.34
HTATSF1-203ENST00000448450 A8MWV9 139 aa17.18■□□□□ 0.34
HTATSF1-203ENST00000448450 CIDEAO60543 219 aa17.18■□□□□ 0.34
HTATSF1-203ENST00000448450 NXPH4O95158 308 aa17.18■□□□□ 0.34
HTATSF1-203ENST00000448450 MGST1P10620 155 aaKnown RBP17.18■□□□□ 0.34
HTATSF1-203ENST00000448450 SAMD10Q9BYL1 202 aa17.18■□□□□ 0.34
HTATSF1-203ENST00000448450 M0R381 172 aa17.17■□□□□ 0.34
HTATSF1-203ENST00000448450 PIK3CD-AS1Q5SR53 167 aa17.17■□□□□ 0.34
HTATSF1-203ENST00000448450 SCRT2Q9NQ03 307 aa17.17■□□□□ 0.34
HTATSF1-203ENST00000448450 IGLV2-8P01709 118 aa17.16■□□□□ 0.34
HTATSF1-203ENST00000448450 GNG4P50150 75 aa17.16■□□□□ 0.34
HTATSF1-203ENST00000448450 Q6ZSN1 163 aa17.16■□□□□ 0.34
HTATSF1-203ENST00000448450 PRADC1Q9BSG0 188 aa17.16■□□□□ 0.34
HTATSF1-203ENST00000448450 TRBV6-4A0A1B0GX49 114 aa17.15■□□□□ 0.34
HTATSF1-203ENST00000448450 C16orf90A8MZG2 172 aa17.15■□□□□ 0.34
HTATSF1-203ENST00000448450 TAGLN2P37802 199 aaKnown RBP17.15■□□□□ 0.34
HTATSF1-203ENST00000448450 KRTAP1-5Q9BYS1 174 aa17.15■□□□□ 0.34
HTATSF1-203ENST00000448450 SIVA1O15304 175 aa17.14■□□□□ 0.33
HTATSF1-203ENST00000448450 CDK2AP2O75956 126 aa17.14■□□□□ 0.33
HTATSF1-203ENST00000448450 RHOHQ15669 191 aa17.14■□□□□ 0.33
HTATSF1-203ENST00000448450 ZFP2Q6ZN57 461 aa17.14■□□□□ 0.33
HTATSF1-203ENST00000448450 FAM74A4Q5TZK3 123 aa17.13■□□□□ 0.33
HTATSF1-203ENST00000448450 ZFP82Q8N141 532 aa17.13■□□□□ 0.33
HTATSF1-203ENST00000448450 C6orf223Q8N319 242 aa17.13■□□□□ 0.33
HTATSF1-203ENST00000448450 DAZAP1Q96EP5 407 aaKnown RBP17.13■□□□□ 0.33
HTATSF1-203ENST00000448450 TRBV20OR9-2A0A075B6H5 130 aa17.12■□□□□ 0.33
HTATSF1-203ENST00000448450 A0A087WWL8 130 aa17.12■□□□□ 0.33
HTATSF1-203ENST00000448450 MUC21A0A0G2JKD1 596 aa17.12■□□□□ 0.33
HTATSF1-203ENST00000448450 MUC21A0A140T8X8 626 aa17.12■□□□□ 0.33
HTATSF1-203ENST00000448450 RBFOX3A6NFN3 312 aa17.12■□□□□ 0.33
HTATSF1-203ENST00000448450 TTC32Q5I0X7 151 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms