RNA–Protein interactions for RNA: ENST00000445369.2

CLDN9-201, Transcript of claudin 9, humanhuman

APPRIS P1 BASIC

Gene CLDN9, Length 2,050 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN9-201ENST00000445369 IGKV2D-26A0A0A0MRZ7 120 aa13.33□□□□□ -0.27
CLDN9-201ENST00000445369 MGPP08493 103 aa13.33□□□□□ -0.27
CLDN9-201ENST00000445369 LGALS1P09382 135 aaKnown RBP13.33□□□□□ -0.27
CLDN9-201ENST00000445369 ODF3Q96PU9 254 aa13.33□□□□□ -0.27
CLDN9-201ENST00000445369 ZNF702PQ9H963 129 aa13.33□□□□□ -0.27
CLDN9-201ENST00000445369 ANKRD17O75179 2603 aaKnown RBP13.33□□□□□ -0.28
CLDN9-201ENST00000445369 C7orf71A4D174 169 aa13.33□□□□□ -0.28
CLDN9-201ENST00000445369 K7EMI3 77 aa13.33□□□□□ -0.28
CLDN9-201ENST00000445369 HSD52Q0P140 79 aa13.33□□□□□ -0.28
CLDN9-201ENST00000445369 ORMDL2Q53FV1 153 aa13.33□□□□□ -0.28
CLDN9-201ENST00000445369 CRYBG3Q68DQ2 2970 aa13.33□□□□□ -0.28
CLDN9-201ENST00000445369 CBY3A6NI87 242 aa13.32□□□□□ -0.28
CLDN9-201ENST00000445369 ELANEP08246 267 aa13.32□□□□□ -0.28
CLDN9-201ENST00000445369 ZNF688P0C7X2 276 aa13.32□□□□□ -0.28
CLDN9-201ENST00000445369 FAM159AQ6UWV7 190 aa13.32□□□□□ -0.28
CLDN9-201ENST00000445369 ERASQ7Z444 233 aa13.32□□□□□ -0.28
CLDN9-201ENST00000445369 MRPL35Q9NZE8 188 aaKnown RBP13.32□□□□□ -0.28
CLDN9-201ENST00000445369 KIF25-AS1Q9Y6Z4 181 aa13.32□□□□□ -0.28
CLDN9-201ENST00000445369 K7EQG2 157 aa13.32□□□□□ -0.28
CLDN9-201ENST00000445369 VAMP3Q15836 100 aa13.32□□□□□ -0.28
CLDN9-201ENST00000445369 KMT2BQ9UMN6 2715 aaPredicted RBP13.31□□□□□ -0.28
CLDN9-201ENST00000445369 UBR5O95071 2799 aaPredicted RBP13.31□□□□□ -0.28
CLDN9-201ENST00000445369 A0A087WX48 190 aa13.31□□□□□ -0.28
CLDN9-201ENST00000445369 LGALS9O00182 355 aa13.31□□□□□ -0.28
CLDN9-201ENST00000445369 LINC00315P59091 139 aa13.31□□□□□ -0.28
CLDN9-201ENST00000445369 WFDC12Q8WWY7 111 aa13.31□□□□□ -0.28
CLDN9-201ENST00000445369 TOMM6Q96B49 74 aa13.31□□□□□ -0.28
CLDN9-201ENST00000445369 FBN2P35556 2912 aa13.31□□□□□ -0.28
CLDN9-201ENST00000445369 IGHV4OR15-8A0A075B7B6 117 aa13.3□□□□□ -0.28
CLDN9-201ENST00000445369 A0A087WW49 117 aa13.3□□□□□ -0.28
CLDN9-201ENST00000445369 A0A0J9YX75 114 aa13.3□□□□□ -0.28
CLDN9-201ENST00000445369 SYNJ2BPP57105 145 aa13.3□□□□□ -0.28
CLDN9-201ENST00000445369 ZC2HC1BQ5TFG8 222 aa13.3□□□□□ -0.28
CLDN9-201ENST00000445369 TRAV12-3A0A0B4J271 114 aa13.3□□□□□ -0.28
CLDN9-201ENST00000445369 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.3□□□□□ -0.28
CLDN9-201ENST00000445369 KRTAP10-9P60411 292 aa13.3□□□□□ -0.28
CLDN9-201ENST00000445369 SNRPD3P62318 126 aaKnown RBP13.3□□□□□ -0.28
CLDN9-201ENST00000445369 TRAV12-1A0A0B4J245 112 aa13.29□□□□□ -0.28
CLDN9-201ENST00000445369 PPP1R17O96001 155 aa13.29□□□□□ -0.28
CLDN9-201ENST00000445369 HLA-DRB4P13762 266 aa13.29□□□□□ -0.28
CLDN9-201ENST00000445369 GTSCR1Q86UQ5 136 aa13.29□□□□□ -0.28
CLDN9-201ENST00000445369 RNF152Q8N8N0 203 aa13.29□□□□□ -0.28
CLDN9-201ENST00000445369 UBE2E2Q96LR5 201 aa13.29□□□□□ -0.28
CLDN9-201ENST00000445369 TMEM160Q9NX00 188 aa13.29□□□□□ -0.28
CLDN9-201ENST00000445369 HLA-DRB4X5D2U9 266 aa13.29□□□□□ -0.28
CLDN9-201ENST00000445369 PRRC2AP48634 2157 aaKnown RBP13.28□□□□□ -0.28
CLDN9-201ENST00000445369 HOXA3O43365 443 aaPredicted RBP13.28□□□□□ -0.28
CLDN9-201ENST00000445369 CD7P09564 240 aa13.28□□□□□ -0.28
CLDN9-201ENST00000445369 HOXD3P31249 432 aaPredicted RBP13.28□□□□□ -0.28
CLDN9-201ENST00000445369 TTTY13Q9BZ97 58 aa13.28□□□□□ -0.28
CLDN9-201ENST00000445369 HIGD1BQ9P298 99 aa13.28□□□□□ -0.28
CLDN9-201ENST00000445369 BEX4Q9NWD9 120 aaPredicted RBP13.27□□□□□ -0.28
CLDN9-201ENST00000445369 MAP1AP78559 2803 aaPredicted RBP13.27□□□□□ -0.29
CLDN9-201ENST00000445369 A6NDN8 102 aa13.27□□□□□ -0.29
CLDN9-201ENST00000445369 PLNP26678 52 aa13.27□□□□□ -0.29
CLDN9-201ENST00000445369 DEFB113Q30KQ7 82 aa13.27□□□□□ -0.29
CLDN9-201ENST00000445369 C9orf85Q96MD7 179 aa13.27□□□□□ -0.29
CLDN9-201ENST00000445369 SCGB3A1Q96QR1 104 aa13.27□□□□□ -0.29
CLDN9-201ENST00000445369 FAM208BQ5VWN6 2430 aa13.26□□□□□ -0.29
CLDN9-201ENST00000445369 TRAV8-6A0A0B4J262 113 aa13.26□□□□□ -0.29
CLDN9-201ENST00000445369 F8VRH5 84 aa13.26□□□□□ -0.29
CLDN9-201ENST00000445369 RPL32P62910 135 aaKnown RBP13.26□□□□□ -0.29
CLDN9-201ENST00000445369 Q5PR19 223 aa13.26□□□□□ -0.29
CLDN9-201ENST00000445369 C2orf66Q6UXQ4 117 aa13.26□□□□□ -0.29
CLDN9-201ENST00000445369 CSTL1Q9H114 145 aa13.26□□□□□ -0.29
CLDN9-201ENST00000445369 JPT2Q9H910 190 aa13.26□□□□□ -0.29
CLDN9-201ENST00000445369 CHD6Q8TD26 2715 aa13.26□□□□□ -0.29
CLDN9-201ENST00000445369 IGHV3-16A0A0C4DH30 117 aa13.25□□□□□ -0.29
CLDN9-201ENST00000445369 H3BRM9 83 aa13.25□□□□□ -0.29
CLDN9-201ENST00000445369 H7C1H1 209 aa13.25□□□□□ -0.29
CLDN9-201ENST00000445369 AMMECR1LQ6DCA0 310 aa13.25□□□□□ -0.29
CLDN9-201ENST00000445369 NEXN-AS1Q8NBZ9 246 aa13.25□□□□□ -0.29
CLDN9-201ENST00000445369 OR4C5Q8NGB2 326 aa13.25□□□□□ -0.29
CLDN9-201ENST00000445369 DUX5Q96PT3 197 aa13.25□□□□□ -0.29
CLDN9-201ENST00000445369 TRAV12-2A0A075B6T6 113 aa13.25□□□□□ -0.29
CLDN9-201ENST00000445369 IGKV3-20P01619 116 aa13.25□□□□□ -0.29
CLDN9-201ENST00000445369 SUMO4Q6EEV6 95 aa13.25□□□□□ -0.29
CLDN9-201ENST00000445369 LRRC75A-AS1Q8N1F1 130 aa13.25□□□□□ -0.29
CLDN9-201ENST00000445369 USP9YO00507 2555 aaPredicted RBP13.24□□□□□ -0.29
CLDN9-201ENST00000445369 FOSL1P15407 271 aa13.24□□□□□ -0.29
CLDN9-201ENST00000445369 CDKN1BP46527 198 aa13.24□□□□□ -0.29
CLDN9-201ENST00000445369 AGRNO00468 2067 aa13.24□□□□□ -0.29
CLDN9-201ENST00000445369 DOPEY2Q9Y3R5 2298 aa13.24□□□□□ -0.29
CLDN9-201ENST00000445369 TRBV25-1A0A075B6N4 114 aa13.23□□□□□ -0.29
CLDN9-201ENST00000445369 Q8N2B8 174 aa13.23□□□□□ -0.29
CLDN9-201ENST00000445369 BAALCQ8WXS3 180 aa13.23□□□□□ -0.29
CLDN9-201ENST00000445369 CHAC1Q9BUX1 264 aa13.23□□□□□ -0.29
CLDN9-201ENST00000445369 CHTOPQ9Y3Y2 248 aaKnown RBP13.23□□□□□ -0.29
CLDN9-201ENST00000445369 A0A087WWL8 130 aa13.22□□□□□ -0.29
CLDN9-201ENST00000445369 DUSP14O95147 198 aaKnown RBP13.22□□□□□ -0.29
CLDN9-201ENST00000445369 POLR2KP53803 58 aaKnown RBP13.22□□□□□ -0.29
CLDN9-201ENST00000445369 SPINK13Q1W4C9 94 aa13.22□□□□□ -0.29
CLDN9-201ENST00000445369 FOXI2Q6ZQN5 318 aa13.22□□□□□ -0.29
CLDN9-201ENST00000445369 MDFICQ9P1T7 246 aa13.22□□□□□ -0.29
CLDN9-201ENST00000445369 LRRK2Q5S007 2527 aa13.22□□□□□ -0.29
CLDN9-201ENST00000445369 C9orf118A6NHY6 69 aa13.22□□□□□ -0.29
CLDN9-201ENST00000445369 NEGR1Q7Z3B1 354 aa13.22□□□□□ -0.29
CLDN9-201ENST00000445369 Q8N1Y9 231 aa13.22□□□□□ -0.29
CLDN9-201ENST00000445369 POLQO75417 2590 aa13.21□□□□□ -0.29
CLDN9-201ENST00000445369 IGHV1OR15-1A0A075B7D0 117 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms