RNA–Protein interactions for RNA: ENST00000444867.1

SEMA3D-202, Transcript of semaphorin 3D, humanhuman

TSL 1 (best) BASIC

Gene SEMA3D, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3D-202ENST00000444867 SPAG8Q99932 426 aaPredicted RBP14.02□□□□□ -0.16
SEMA3D-202ENST00000444867 CITED2Q99967 270 aaPredicted RBP14.02□□□□□ -0.16
SEMA3D-202ENST00000444867 TIMM8BQ9Y5J9 83 aaPredicted RBP14.02□□□□□ -0.16
SEMA3D-202ENST00000444867 LINC01546A6NGU7 62 aa14.01□□□□□ -0.17
SEMA3D-202ENST00000444867 OR4C46A6NHA9 309 aa14.01□□□□□ -0.17
SEMA3D-202ENST00000444867 TNFRSF6BO95407 300 aa14.01□□□□□ -0.17
SEMA3D-202ENST00000444867 HLA-DRB4P13762 266 aa14.01□□□□□ -0.17
SEMA3D-202ENST00000444867 AMTNQ6UX39 209 aa14.01□□□□□ -0.17
SEMA3D-202ENST00000444867 SMR3AQ99954 134 aa14.01□□□□□ -0.17
SEMA3D-202ENST00000444867 C20orf144Q9BQM9 153 aa14.01□□□□□ -0.17
SEMA3D-202ENST00000444867 NXT2Q9NPJ8 142 aaKnown RBP14.01□□□□□ -0.17
SEMA3D-202ENST00000444867 HLA-DRB4X5D2U9 266 aa14.01□□□□□ -0.17
SEMA3D-202ENST00000444867 M0R381 172 aa14.01□□□□□ -0.17
SEMA3D-202ENST00000444867 DEFB131AP59861 70 aa14.01□□□□□ -0.17
SEMA3D-202ENST00000444867 DEFB125Q8N687 156 aa14.01□□□□□ -0.17
SEMA3D-202ENST00000444867 MAP1LC3CQ9BXW4 147 aa14.01□□□□□ -0.17
SEMA3D-202ENST00000444867 DPH3P1Q9H4G8 78 aa14.01□□□□□ -0.17
SEMA3D-202ENST00000444867 A0A1W2PRX2 142 aa14□□□□□ -0.17
SEMA3D-202ENST00000444867 PRSS47A8MTI9 375 aa14□□□□□ -0.17
SEMA3D-202ENST00000444867 IGKV3-20P01619 116 aa14□□□□□ -0.17
SEMA3D-202ENST00000444867 C11orf44Q8N8P7 122 aa14□□□□□ -0.17
SEMA3D-202ENST00000444867 OR2K2Q8NGT1 345 aa14□□□□□ -0.17
SEMA3D-202ENST00000444867 F8P00451 2351 aa13.99□□□□□ -0.17
SEMA3D-202ENST00000444867 C20orf202A1L168 122 aa13.99□□□□□ -0.17
SEMA3D-202ENST00000444867 SYS1-DBNDD2H3BUS1 97 aa13.99□□□□□ -0.17
SEMA3D-202ENST00000444867 SPINK13Q1W4C9 94 aa13.99□□□□□ -0.17
SEMA3D-202ENST00000444867 PET117Q6UWS5 81 aa13.99□□□□□ -0.17
SEMA3D-202ENST00000444867 AP1S3Q96PC3 154 aa13.99□□□□□ -0.17
SEMA3D-202ENST00000444867 IGHV1OR15-1A0A075B7D0 117 aa13.98□□□□□ -0.17
SEMA3D-202ENST00000444867 CD7P09564 240 aa13.98□□□□□ -0.17
SEMA3D-202ENST00000444867 CD300EQ496F6 205 aaPredicted RBP13.98□□□□□ -0.17
SEMA3D-202ENST00000444867 MAP6D1Q9H9H5 199 aa13.98□□□□□ -0.17
SEMA3D-202ENST00000444867 H3BMM0 161 aa13.97□□□□□ -0.17
SEMA3D-202ENST00000444867 HBDP02042 147 aa13.97□□□□□ -0.17
SEMA3D-202ENST00000444867 PROK1P58294 105 aa13.97□□□□□ -0.17
SEMA3D-202ENST00000444867 DEFA6Q01524 100 aa13.97□□□□□ -0.17
SEMA3D-202ENST00000444867 HIST2H2BDQ6DRA6 164 aa13.97□□□□□ -0.17
SEMA3D-202ENST00000444867 NRACQ8N912 160 aa13.97□□□□□ -0.17
SEMA3D-202ENST00000444867 TRAV12-2A0A075B6T6 113 aa13.97□□□□□ -0.17
SEMA3D-202ENST00000444867 KNCNA6PVL3 124 aa13.97□□□□□ -0.17
SEMA3D-202ENST00000444867 LINC00173Q6ZV60 143 aa13.97□□□□□ -0.17
SEMA3D-202ENST00000444867 Q8N8P6 123 aa13.97□□□□□ -0.17
SEMA3D-202ENST00000444867 ZNF747Q9BV97 191 aa13.97□□□□□ -0.17
SEMA3D-202ENST00000444867 PAM16Q9Y3D7 125 aa13.97□□□□□ -0.17
SEMA3D-202ENST00000444867 A0A096LNJ9 63 aa13.96□□□□□ -0.17
SEMA3D-202ENST00000444867 IGHV3-16A0A0C4DH30 117 aa13.96□□□□□ -0.17
SEMA3D-202ENST00000444867 GAS8-AS1O95177 125 aa13.96□□□□□ -0.17
SEMA3D-202ENST00000444867 C9orf85Q96MD7 179 aa13.96□□□□□ -0.17
SEMA3D-202ENST00000444867 CLUHP3Q96NS8 147 aa13.96□□□□□ -0.17
SEMA3D-202ENST00000444867 NDUFAF3Q9BU61 184 aa13.96□□□□□ -0.17
SEMA3D-202ENST00000444867 ZNF256Q9Y2P7 627 aaPredicted RBP13.96□□□□□ -0.17
SEMA3D-202ENST00000444867 AGRNO00468 2067 aa13.96□□□□□ -0.18
SEMA3D-202ENST00000444867 SPATA12Q7Z6I5 190 aa13.95□□□□□ -0.18
SEMA3D-202ENST00000444867 POM121L12Q8N7R1 296 aa13.95□□□□□ -0.18
SEMA3D-202ENST00000444867 TRGV11A0A075B6L2 103 aa13.94□□□□□ -0.18
SEMA3D-202ENST00000444867 GATA1P15976 413 aaPredicted RBP13.94□□□□□ -0.18
SEMA3D-202ENST00000444867 TEP1Q99973 2627 aaKnown RBP13.94□□□□□ -0.18
SEMA3D-202ENST00000444867 MUC4Q99102 2169 aa13.94□□□□□ -0.18
SEMA3D-202ENST00000444867 IGLV2-18A0A075B6J9 118 aa13.93□□□□□ -0.18
SEMA3D-202ENST00000444867 PPP1R17O96001 155 aa13.93□□□□□ -0.18
SEMA3D-202ENST00000444867 FOSL1P15407 271 aa13.93□□□□□ -0.18
SEMA3D-202ENST00000444867 SPATA45Q537H7 98 aa13.93□□□□□ -0.18
SEMA3D-202ENST00000444867 C14orf178Q8N769 122 aaPredicted RBP13.93□□□□□ -0.18
SEMA3D-202ENST00000444867 SYT8Q8NBV8 401 aa13.93□□□□□ -0.18
SEMA3D-202ENST00000444867 TRAV9-2A0A087WT02 112 aa13.93□□□□□ -0.18
SEMA3D-202ENST00000444867 Q8N1Y9 231 aa13.93□□□□□ -0.18
SEMA3D-202ENST00000444867 TRAV26-2A0A0B4J265 109 aa13.92□□□□□ -0.18
SEMA3D-202ENST00000444867 SPRY2O43597 315 aa13.92□□□□□ -0.18
SEMA3D-202ENST00000444867 SMIM17P0DL12 118 aa13.92□□□□□ -0.18
SEMA3D-202ENST00000444867 FCER1GP30273 86 aa13.92□□□□□ -0.18
SEMA3D-202ENST00000444867 C14orf144Q96I85 54 aa13.92□□□□□ -0.18
SEMA3D-202ENST00000444867 C20orf78Q9BR46 151 aa13.92□□□□□ -0.18
SEMA3D-202ENST00000444867 MIEN1Q9BRT3 115 aa13.92□□□□□ -0.18
SEMA3D-202ENST00000444867 KIF25-AS1Q9Y6Z4 181 aa13.92□□□□□ -0.18
SEMA3D-202ENST00000444867 HIVEP2P31629 2446 aa13.91□□□□□ -0.18
SEMA3D-202ENST00000444867 RBMY1BA6NDE4 496 aaKnown RBP13.91□□□□□ -0.18
SEMA3D-202ENST00000444867 RBMY1EA6NEQ0 496 aaKnown RBP13.91□□□□□ -0.18
SEMA3D-202ENST00000444867 ADARB2-AS1A8MUL3 147 aa13.91□□□□□ -0.18
SEMA3D-202ENST00000444867 RBMY1DP0C7P1 496 aaKnown RBP13.91□□□□□ -0.18
SEMA3D-202ENST00000444867 CMC4P56277 68 aaPredicted RBP13.91□□□□□ -0.18
SEMA3D-202ENST00000444867 LINC01545Q5VT33 79 aa13.91□□□□□ -0.18
SEMA3D-202ENST00000444867 MGPP08493 103 aa13.9□□□□□ -0.18
SEMA3D-202ENST00000444867 ZNF705AQ6ZN79 300 aaPredicted RBP13.9□□□□□ -0.18
SEMA3D-202ENST00000444867 CTAG1AP78358 180 aa13.9□□□□□ -0.19
SEMA3D-202ENST00000444867 RASL10AQ92737 203 aa13.9□□□□□ -0.19
SEMA3D-202ENST00000444867 SMIM2Q9BVW6 85 aa13.9□□□□□ -0.19
SEMA3D-202ENST00000444867 MDFICQ9P1T7 246 aa13.9□□□□□ -0.19
SEMA3D-202ENST00000444867 K7EMI3 77 aa13.89□□□□□ -0.19
SEMA3D-202ENST00000444867 LINC00315P59091 139 aa13.89□□□□□ -0.19
SEMA3D-202ENST00000444867 ZNF124Q15973 351 aa13.89□□□□□ -0.19
SEMA3D-202ENST00000444867 ODF3L2Q3SX64 289 aa13.89□□□□□ -0.19
SEMA3D-202ENST00000444867 NDUFA11Q86Y39 141 aa13.89□□□□□ -0.19
SEMA3D-202ENST00000444867 ATOH7Q8N100 152 aa13.89□□□□□ -0.19
SEMA3D-202ENST00000444867 LINC00467Q9BRT7 94 aa13.89□□□□□ -0.19
SEMA3D-202ENST00000444867 SORL1Q92673 2214 aa13.88□□□□□ -0.19
SEMA3D-202ENST00000444867 INAFM1C9JVW0 142 aa13.88□□□□□ -0.19
SEMA3D-202ENST00000444867 FXYD7P58549 80 aa13.88□□□□□ -0.19
SEMA3D-202ENST00000444867 SUMO2P61956 95 aaKnown RBP13.88□□□□□ -0.19
SEMA3D-202ENST00000444867 LAGE3Q14657 143 aa13.88□□□□□ -0.19
SEMA3D-202ENST00000444867 CBY3A6NI87 242 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms