RNA–Protein interactions for RNA: ENST00000444533.5

SSBP3-208, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-208ENST00000444533 OR2D3Q8NGH3 330 aa9.96□□□□□ -0.82
SSBP3-208ENST00000444533 PTH2Q96A98 100 aa9.96□□□□□ -0.82
SSBP3-208ENST00000444533 TRBV20OR9-2A0A075B6H5 130 aa9.95□□□□□ -0.82
SSBP3-208ENST00000444533 PGPEP1LA6NFU8 196 aa9.95□□□□□ -0.82
SSBP3-208ENST00000444533 IGLV2-8P01709 118 aa9.95□□□□□ -0.82
SSBP3-208ENST00000444533 MED14OSP0DP75 135 aa9.95□□□□□ -0.82
SSBP3-208ENST00000444533 PIK3CD-AS1Q5SR53 167 aa9.95□□□□□ -0.82
SSBP3-208ENST00000444533 ZFP82Q8N141 532 aa9.95□□□□□ -0.82
SSBP3-208ENST00000444533 OCC1Q8TAD7 63 aa9.95□□□□□ -0.82
SSBP3-208ENST00000444533 TRAV26-1A0A087WT03 109 aa9.94□□□□□ -0.82
SSBP3-208ENST00000444533 A8MWV9 139 aa9.94□□□□□ -0.82
SSBP3-208ENST00000444533 NUDT3O95989 172 aa9.94□□□□□ -0.82
SSBP3-208ENST00000444533 TMEM241Q24JQ0 296 aa9.94□□□□□ -0.82
SSBP3-208ENST00000444533 SOHLH1Q5JUK2 328 aa9.94□□□□□ -0.82
SSBP3-208ENST00000444533 TPPP3Q9BW30 176 aa9.94□□□□□ -0.82
SSBP3-208ENST00000444533 PRO0255Q9UI72 69 aa9.94□□□□□ -0.82
SSBP3-208ENST00000444533 C19orf71A6NCJ1 209 aa9.93□□□□□ -0.82
SSBP3-208ENST00000444533 H3BNG1 76 aa9.93□□□□□ -0.82
SSBP3-208ENST00000444533 M0R381 172 aa9.93□□□□□ -0.82
SSBP3-208ENST00000444533 PAX4O43316 350 aa9.93□□□□□ -0.82
SSBP3-208ENST00000444533 LY6G6CO95867 125 aa9.93□□□□□ -0.82
SSBP3-208ENST00000444533 P0DMU3 169 aa9.93□□□□□ -0.82
SSBP3-208ENST00000444533 FAM231AP0DMU4 169 aa9.93□□□□□ -0.82
SSBP3-208ENST00000444533 FAM231CP0DMU5 169 aa9.93□□□□□ -0.82
SSBP3-208ENST00000444533 ERVFC1-1P60608 527 aa9.93□□□□□ -0.82
SSBP3-208ENST00000444533 RPL19P84098 196 aaKnown RBP9.93□□□□□ -0.82
SSBP3-208ENST00000444533 SPANXN1Q5VSR9 72 aa9.93□□□□□ -0.82
SSBP3-208ENST00000444533 RPP21Q9H633 154 aaKnown RBP9.93□□□□□ -0.82
SSBP3-208ENST00000444533 APLNQ9ULZ1 77 aa9.93□□□□□ -0.82
SSBP3-208ENST00000444533 HHLA3Q9XRX5 114 aa9.93□□□□□ -0.82
SSBP3-208ENST00000444533 A0A0J9YY99 117 aa9.92□□□□□ -0.82
SSBP3-208ENST00000444533 A0A1W2PPQ1 181 aa9.92□□□□□ -0.82
SSBP3-208ENST00000444533 GATCO43716 136 aaKnown RBP9.92□□□□□ -0.82
SSBP3-208ENST00000444533 SFTA3P0C7M3 94 aa9.92□□□□□ -0.82
SSBP3-208ENST00000444533 UBE2DNLQ8IWF7 75 aa9.92□□□□□ -0.82
SSBP3-208ENST00000444533 C15orf54Q8N8G6 183 aa9.92□□□□□ -0.82
SSBP3-208ENST00000444533 FER1L6-AS1Q8NA97 138 aa9.92□□□□□ -0.82
SSBP3-208ENST00000444533 NUDT10Q8NFP7 164 aa9.92□□□□□ -0.82
SSBP3-208ENST00000444533 NUDT11Q96G61 164 aa9.92□□□□□ -0.82
SSBP3-208ENST00000444533 NAT8Q9UHE5 227 aa9.92□□□□□ -0.82
SSBP3-208ENST00000444533 F2Z2F3 143 aa9.91□□□□□ -0.82
SSBP3-208ENST00000444533 K7EN84 100 aa9.91□□□□□ -0.82
SSBP3-208ENST00000444533 RHODO00212 210 aa9.91□□□□□ -0.82
SSBP3-208ENST00000444533 OR5AL1P0C617 328 aa9.91□□□□□ -0.82
SSBP3-208ENST00000444533 HOXA5P20719 270 aa9.91□□□□□ -0.82
SSBP3-208ENST00000444533 LGALS9CQ6DKI2 356 aa9.91□□□□□ -0.82
SSBP3-208ENST00000444533 LINC01551Q86U37 167 aa9.91□□□□□ -0.82
SSBP3-208ENST00000444533 ZNF479Q96JC4 524 aa9.91□□□□□ -0.82
SSBP3-208ENST00000444533 RNASE7Q9H1E1 156 aaKnown RBP9.91□□□□□ -0.82
SSBP3-208ENST00000444533 DNAH7Q8WXX0 4024 aa9.9□□□□□ -0.82
SSBP3-208ENST00000444533 LCE6AA0A183 80 aa9.9□□□□□ -0.82
SSBP3-208ENST00000444533 A8MWL6 223 aa9.9□□□□□ -0.82
SSBP3-208ENST00000444533 RS1O15537 224 aa9.9□□□□□ -0.82
SSBP3-208ENST00000444533 SMIM17P0DL12 118 aa9.9□□□□□ -0.82
SSBP3-208ENST00000444533 CACNG7P62955 275 aa9.9□□□□□ -0.82
SSBP3-208ENST00000444533 IFITM2Q01629 132 aa9.9□□□□□ -0.82
SSBP3-208ENST00000444533 ADIRFQ15847 76 aa9.9□□□□□ -0.82
SSBP3-208ENST00000444533 CFAP126Q5VTH2 177 aa9.9□□□□□ -0.82
SSBP3-208ENST00000444533 DMRTA1Q5VZB9 504 aa9.9□□□□□ -0.82
SSBP3-208ENST00000444533 FAM231DQ6ZW35 169 aa9.9□□□□□ -0.82
SSBP3-208ENST00000444533 BORCS7Q96B45 105 aa9.9□□□□□ -0.82
SSBP3-208ENST00000444533 PRADC1Q9BSG0 188 aa9.9□□□□□ -0.82
SSBP3-208ENST00000444533 SCRT2Q9NQ03 307 aa9.9□□□□□ -0.82
SSBP3-208ENST00000444533 ICOSQ9Y6W8 199 aa9.9□□□□□ -0.82
SSBP3-208ENST00000444533 SNAI2O43623 268 aa9.89□□□□□ -0.83
SSBP3-208ENST00000444533 CCL18P55774 89 aa9.89□□□□□ -0.83
SSBP3-208ENST00000444533 SRSF3P84103 164 aaKnown RBP9.89□□□□□ -0.83
SSBP3-208ENST00000444533 FHL2Q14192 279 aa9.89□□□□□ -0.83
SSBP3-208ENST00000444533 ZFP2Q6ZN57 461 aa9.89□□□□□ -0.83
SSBP3-208ENST00000444533 LINC00476Q8WZB0 136 aa9.89□□□□□ -0.83
SSBP3-208ENST00000444533 GZMBP10144 247 aa9.88□□□□□ -0.83
SSBP3-208ENST00000444533 CRYBA4P53673 196 aa9.88□□□□□ -0.83
SSBP3-208ENST00000444533 SSTP61278 116 aa9.88□□□□□ -0.83
SSBP3-208ENST00000444533 MRPL23Q16540 153 aaKnown RBP9.88□□□□□ -0.83
SSBP3-208ENST00000444533 FAM74A4Q5TZK3 123 aa9.88□□□□□ -0.83
SSBP3-208ENST00000444533 UQCC3Q6UW78 93 aa9.88□□□□□ -0.83
SSBP3-208ENST00000444533 SSBP4Q9BWG4 385 aaPredicted RBP9.88□□□□□ -0.83
SSBP3-208ENST00000444533 IGHV3-73A0A0B4J1V6 119 aa9.87□□□□□ -0.83
SSBP3-208ENST00000444533 C9JQL5 133 aa9.87□□□□□ -0.83
SSBP3-208ENST00000444533 SRIP30626 198 aa9.87□□□□□ -0.83
SSBP3-208ENST00000444533 RHOHQ15669 191 aa9.87□□□□□ -0.83
SSBP3-208ENST00000444533 CT83Q5H943 113 aa9.87□□□□□ -0.83
SSBP3-208ENST00000444533 SH2D6Q7Z4S9 175 aa9.87□□□□□ -0.83
SSBP3-208ENST00000444533 POM121L12Q8N7R1 296 aa9.87□□□□□ -0.83
SSBP3-208ENST00000444533 OR10AG1Q8NH19 301 aa9.87□□□□□ -0.83
SSBP3-208ENST00000444533 SFRP2Q96HF1 295 aa9.87□□□□□ -0.83
SSBP3-208ENST00000444533 AP1S3Q96PC3 154 aa9.87□□□□□ -0.83
SSBP3-208ENST00000444533 OSTCQ9NRP0 149 aa9.87□□□□□ -0.83
SSBP3-208ENST00000444533 MUC4Q99102 2169 aa9.87□□□□□ -0.83
SSBP3-208ENST00000444533 TRBV6-4A0A1B0GX49 114 aa9.86□□□□□ -0.83
SSBP3-208ENST00000444533 TRGC1P0CF51 173 aa9.86□□□□□ -0.83
SSBP3-208ENST00000444533 GYPEP15421 78 aa9.86□□□□□ -0.83
SSBP3-208ENST00000444533 GATA1P15976 413 aaPredicted RBP9.86□□□□□ -0.83
SSBP3-208ENST00000444533 RPL23P62829 140 aaKnown RBP9.86□□□□□ -0.83
SSBP3-208ENST00000444533 RNF212Q495C1 297 aa9.86□□□□□ -0.83
SSBP3-208ENST00000444533 SMIM15Q7Z3B0 74 aa9.86□□□□□ -0.83
SSBP3-208ENST00000444533 TENM2Q9NT68 2774 aa9.86□□□□□ -0.83
SSBP3-208ENST00000444533 A0A087WWL8 130 aa9.85□□□□□ -0.83
SSBP3-208ENST00000444533 MUC21A0A0G2JKD1 596 aa9.85□□□□□ -0.83
SSBP3-208ENST00000444533 MUC21A0A140T8X8 626 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 216.4 ms