RNA–Protein interactions for RNA: ENST00000444532.2

CCDC188-202, Transcript of coiled-coil domain containing 188, humanhuman

TSL 3

Gene CCDC188, Length 628 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-202ENST00000444532 NEGR1Q7Z3B1 354 aa12.84□□□□□ -0.35
CCDC188-202ENST00000444532 PCNPQ8WW12 178 aaKnown RBP12.84□□□□□ -0.35
CCDC188-202ENST00000444532 SCO2A0A1W2PP80 73 aa12.83□□□□□ -0.36
CCDC188-202ENST00000444532 PGPEP1LA6NFU8 196 aa12.83□□□□□ -0.36
CCDC188-202ENST00000444532 KRBOX1C9JBD0 128 aa12.83□□□□□ -0.36
CCDC188-202ENST00000444532 K7EQD1 137 aa12.83□□□□□ -0.36
CCDC188-202ENST00000444532 RS1O15537 224 aa12.83□□□□□ -0.36
CCDC188-202ENST00000444532 SH2D1AO60880 128 aa12.83□□□□□ -0.36
CCDC188-202ENST00000444532 TTC32Q5I0X7 151 aa12.83□□□□□ -0.36
CCDC188-202ENST00000444532 ZNF506Q5JVG8 444 aa12.83□□□□□ -0.36
CCDC188-202ENST00000444532 PIK3CD-AS1Q5SR53 167 aa12.83□□□□□ -0.36
CCDC188-202ENST00000444532 DNLZQ5SXM8 178 aa12.83□□□□□ -0.36
CCDC188-202ENST00000444532 CFAP126Q5VTH2 177 aa12.83□□□□□ -0.36
CCDC188-202ENST00000444532 GYPEP15421 78 aa12.82□□□□□ -0.36
CCDC188-202ENST00000444532 GATA1P15976 413 aaPredicted RBP12.82□□□□□ -0.36
CCDC188-202ENST00000444532 SRIP30626 198 aa12.82□□□□□ -0.36
CCDC188-202ENST00000444532 CCL20P78556 96 aa12.82□□□□□ -0.36
CCDC188-202ENST00000444532 LYPD5Q6UWN5 251 aa12.82□□□□□ -0.36
CCDC188-202ENST00000444532 IL36BQ9NZH7 164 aa12.82□□□□□ -0.36
CCDC188-202ENST00000444532 GNG13Q9P2W3 67 aa12.82□□□□□ -0.36
CCDC188-202ENST00000444532 A0A1W2PPQ1 181 aa12.81□□□□□ -0.36
CCDC188-202ENST00000444532 ALKAL2Q6UX46 152 aa12.81□□□□□ -0.36
CCDC188-202ENST00000444532 C6orf223Q8N319 242 aa12.81□□□□□ -0.36
CCDC188-202ENST00000444532 TXNDC17Q9BRA2 123 aa12.81□□□□□ -0.36
CCDC188-202ENST00000444532 DNAH2Q9P225 4427 aa12.8□□□□□ -0.36
CCDC188-202ENST00000444532 A0A1B0GVY2 172 aa12.8□□□□□ -0.36
CCDC188-202ENST00000444532 M0R036 132 aa12.8□□□□□ -0.36
CCDC188-202ENST00000444532 LINC01559Q495D7 138 aa12.8□□□□□ -0.36
CCDC188-202ENST00000444532 SH2D6Q7Z4S9 175 aa12.8□□□□□ -0.36
CCDC188-202ENST00000444532 BAGE2Q86Y30 109 aa12.8□□□□□ -0.36
CCDC188-202ENST00000444532 TRBV6-4A0A1B0GX49 114 aa12.79□□□□□ -0.36
CCDC188-202ENST00000444532 A8MWV9 139 aa12.79□□□□□ -0.36
CCDC188-202ENST00000444532 SIVA1O15304 175 aa12.79□□□□□ -0.36
CCDC188-202ENST00000444532 MLST8Q9BVC4 326 aa12.79□□□□□ -0.36
CCDC188-202ENST00000444532 H3BVH4 76 aa12.78□□□□□ -0.36
CCDC188-202ENST00000444532 NXPH4O95158 308 aa12.78□□□□□ -0.36
CCDC188-202ENST00000444532 ARMS2P0C7Q2 107 aa12.78□□□□□ -0.36
CCDC188-202ENST00000444532 BTF3P20290 206 aaKnown RBP12.78□□□□□ -0.36
CCDC188-202ENST00000444532 ZFP2Q6ZN57 461 aa12.78□□□□□ -0.36
CCDC188-202ENST00000444532 ZNF575Q86XF7 245 aa12.78□□□□□ -0.36
CCDC188-202ENST00000444532 SLC25A29Q8N8R3 303 aa12.78□□□□□ -0.36
CCDC188-202ENST00000444532 NHLRC2Q8NBF2 726 aa12.78□□□□□ -0.36
CCDC188-202ENST00000444532 C11orf52Q96A22 123 aa12.78□□□□□ -0.36
CCDC188-202ENST00000444532 PRADC1Q9BSG0 188 aa12.78□□□□□ -0.36
CCDC188-202ENST00000444532 BIRC6Q9NR09 4857 aa12.78□□□□□ -0.36
CCDC188-202ENST00000444532 DNAH17Q9UFH2 4485 aa12.77□□□□□ -0.36
CCDC188-202ENST00000444532 GRIFINA4D1Z8 144 aa12.77□□□□□ -0.37
CCDC188-202ENST00000444532 MGST1P10620 155 aaKnown RBP12.77□□□□□ -0.37
CCDC188-202ENST00000444532 SYT8Q8NBV8 401 aa12.77□□□□□ -0.37
CCDC188-202ENST00000444532 IGHV3-73A0A0B4J1V6 119 aa12.76□□□□□ -0.37
CCDC188-202ENST00000444532 LOC100131303A0A0U1RQF7 123 aa12.76□□□□□ -0.37
CCDC188-202ENST00000444532 IFNA1P01562 189 aa12.76□□□□□ -0.37
CCDC188-202ENST00000444532 RPL35P42766 123 aaKnown RBP12.76□□□□□ -0.37
CCDC188-202ENST00000444532 RHOHQ15669 191 aa12.76□□□□□ -0.37
CCDC188-202ENST00000444532 KRTAP1-5Q9BYS1 174 aa12.76□□□□□ -0.37
CCDC188-202ENST00000444532 PARLQ9H300 379 aa12.76□□□□□ -0.37
CCDC188-202ENST00000444532 HECTD4Q9Y4D8 3996 aa12.76□□□□□ -0.37
CCDC188-202ENST00000444532 TMSB15BA0A087X1C1 80 aa12.75□□□□□ -0.37
CCDC188-202ENST00000444532 MEF2BQ02080 365 aaPredicted RBP12.75□□□□□ -0.37
CCDC188-202ENST00000444532 DMRTA1Q5VZB9 504 aa12.75□□□□□ -0.37
CCDC188-202ENST00000444532 SCRT2Q9NQ03 307 aa12.75□□□□□ -0.37
CCDC188-202ENST00000444532 PHLDA3Q9Y5J5 127 aa12.75□□□□□ -0.37
CCDC188-202ENST00000444532 FAT2Q9NYQ8 4349 aa12.75□□□□□ -0.37
CCDC188-202ENST00000444532 PDE6DO43924 150 aa12.74□□□□□ -0.37
CCDC188-202ENST00000444532 TAGLN2P37802 199 aaKnown RBP12.74□□□□□ -0.37
CCDC188-202ENST00000444532 TIRAPP58753 221 aa12.74□□□□□ -0.37
CCDC188-202ENST00000444532 CXCL1P09341 107 aa12.73□□□□□ -0.37
CCDC188-202ENST00000444532 MED14OSP0DP75 135 aa12.73□□□□□ -0.37
CCDC188-202ENST00000444532 BLOC1S1P78537 153 aa12.73□□□□□ -0.37
CCDC188-202ENST00000444532 DERL1Q9BUN8 251 aa12.73□□□□□ -0.37
CCDC188-202ENST00000444532 TRAV9-2A0A087WT02 112 aa12.72□□□□□ -0.37
CCDC188-202ENST00000444532 K7EP13 123 aa12.72□□□□□ -0.37
CCDC188-202ENST00000444532 RHODO00212 210 aa12.72□□□□□ -0.37
CCDC188-202ENST00000444532 BCL2P10415 239 aa12.72□□□□□ -0.37
CCDC188-202ENST00000444532 UFSP1Q6NVU6 142 aa12.72□□□□□ -0.37
CCDC188-202ENST00000444532 ZFP82Q8N141 532 aa12.72□□□□□ -0.37
CCDC188-202ENST00000444532 JPT2Q9H910 190 aa12.72□□□□□ -0.37
CCDC188-202ENST00000444532 VAX2Q9UIW0 290 aa12.72□□□□□ -0.37
CCDC188-202ENST00000444532 TNP2Q05952 138 aa12.71□□□□□ -0.37
CCDC188-202ENST00000444532 PRR27Q6MZM9 219 aa12.71□□□□□ -0.37
CCDC188-202ENST00000444532 TEX261Q6UWH6 196 aa12.71□□□□□ -0.37
CCDC188-202ENST00000444532 SMIM12Q96EX1 92 aa12.71□□□□□ -0.37
CCDC188-202ENST00000444532 SFRP2Q96HF1 295 aa12.71□□□□□ -0.37
CCDC188-202ENST00000444532 SAMD10Q9BYL1 202 aa12.71□□□□□ -0.37
CCDC188-202ENST00000444532 LY96Q9Y6Y9 160 aa12.71□□□□□ -0.37
CCDC188-202ENST00000444532 M0R381 172 aa12.7□□□□□ -0.38
CCDC188-202ENST00000444532 RPL19P84098 196 aaKnown RBP12.7□□□□□ -0.38
CCDC188-202ENST00000444532 CENPWQ5EE01 88 aa12.7□□□□□ -0.38
CCDC188-202ENST00000444532 Q6ZSN1 163 aa12.7□□□□□ -0.38
CCDC188-202ENST00000444532 LYPD6BQ8NI32 183 aa12.7□□□□□ -0.38
CCDC188-202ENST00000444532 PKD1P98161 4303 aa12.69□□□□□ -0.38
CCDC188-202ENST00000444532 GNG4P50150 75 aa12.69□□□□□ -0.38
CCDC188-202ENST00000444532 WFDC10BQ8IUB3 73 aa12.69□□□□□ -0.38
CCDC188-202ENST00000444532 ATP6V0E2Q8NHE4 81 aa12.69□□□□□ -0.38
CCDC188-202ENST00000444532 MED9Q9NWA0 146 aa12.69□□□□□ -0.38
CCDC188-202ENST00000444532 RAB19A4D1S5 217 aa12.68□□□□□ -0.38
CCDC188-202ENST00000444532 IGLV2-8P01709 118 aa12.68□□□□□ -0.38
CCDC188-202ENST00000444532 DNAH10OSP0CZ25 163 aa12.68□□□□□ -0.38
CCDC188-202ENST00000444532 EVI2AP22794 236 aa12.68□□□□□ -0.38
CCDC188-202ENST00000444532 LINC00315P59091 139 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms