RNA–Protein interactions for RNA: ENST00000444508.5

SMARCAL1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 2

Gene SMARCAL1, Length 711 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-209ENST00000444508 KMT2AQ03164 3969 aa12.18□□□□□ -0.46
SMARCAL1-209ENST00000444508 DNAH6Q9C0G6 4158 aa12.17□□□□□ -0.46
SMARCAL1-209ENST00000444508 GRIFINA4D1Z8 144 aa12.17□□□□□ -0.46
SMARCAL1-209ENST00000444508 RBFOX3A6NFN3 312 aa12.17□□□□□ -0.46
SMARCAL1-209ENST00000444508 H3BVH4 76 aa12.17□□□□□ -0.46
SMARCAL1-209ENST00000444508 CCL18P55774 89 aa12.17□□□□□ -0.46
SMARCAL1-209ENST00000444508 ZNF506Q5JVG8 444 aa12.17□□□□□ -0.46
SMARCAL1-209ENST00000444508 DNLZQ5SXM8 178 aa12.17□□□□□ -0.46
SMARCAL1-209ENST00000444508 VSIG2Q96IQ7 327 aa12.17□□□□□ -0.46
SMARCAL1-209ENST00000444508 RAB19A4D1S5 217 aa12.16□□□□□ -0.46
SMARCAL1-209ENST00000444508 PGPEP1LA6NFU8 196 aa12.16□□□□□ -0.46
SMARCAL1-209ENST00000444508 MGST1P10620 155 aaKnown RBP12.16□□□□□ -0.46
SMARCAL1-209ENST00000444508 CRYBA4P53673 196 aa12.16□□□□□ -0.46
SMARCAL1-209ENST00000444508 SMIM12Q96EX1 92 aa12.16□□□□□ -0.46
SMARCAL1-209ENST00000444508 ARMS2P0C7Q2 107 aa12.15□□□□□ -0.46
SMARCAL1-209ENST00000444508 FAM3BP58499 235 aaPredicted RBP12.15□□□□□ -0.46
SMARCAL1-209ENST00000444508 SYT8Q8NBV8 401 aa12.15□□□□□ -0.46
SMARCAL1-209ENST00000444508 ICOSQ9Y6W8 199 aa12.15□□□□□ -0.46
SMARCAL1-209ENST00000444508 RS1O15537 224 aa12.14□□□□□ -0.47
SMARCAL1-209ENST00000444508 CIDEAO60543 219 aa12.14□□□□□ -0.47
SMARCAL1-209ENST00000444508 PIK3CD-AS1Q5SR53 167 aa12.14□□□□□ -0.47
SMARCAL1-209ENST00000444508 CFAP126Q5VTH2 177 aa12.14□□□□□ -0.47
SMARCAL1-209ENST00000444508 TEX261Q6UWH6 196 aa12.14□□□□□ -0.47
SMARCAL1-209ENST00000444508 DAZAP1Q96EP5 407 aaKnown RBP12.14□□□□□ -0.47
SMARCAL1-209ENST00000444508 EIF5A2Q9GZV4 153 aaKnown RBP12.14□□□□□ -0.47
SMARCAL1-209ENST00000444508 BIN3Q9NQY0 253 aa12.14□□□□□ -0.47
SMARCAL1-209ENST00000444508 PHLDA3Q9Y5J5 127 aa12.14□□□□□ -0.47
SMARCAL1-209ENST00000444508 TMEM250H0YL14 139 aa12.13□□□□□ -0.47
SMARCAL1-209ENST00000444508 RPL19P84098 196 aaKnown RBP12.13□□□□□ -0.47
SMARCAL1-209ENST00000444508 TOR2AQ5JU69 321 aa12.13□□□□□ -0.47
SMARCAL1-209ENST00000444508 PCNPQ8WW12 178 aaKnown RBP12.13□□□□□ -0.47
SMARCAL1-209ENST00000444508 TRBV20OR9-2A0A075B6H5 130 aa12.12□□□□□ -0.47
SMARCAL1-209ENST00000444508 A0A096LPF7 62 aa12.12□□□□□ -0.47
SMARCAL1-209ENST00000444508 A8MWV9 139 aa12.12□□□□□ -0.47
SMARCAL1-209ENST00000444508 IGLV2-8P01709 118 aa12.12□□□□□ -0.47
SMARCAL1-209ENST00000444508 CXCL1P09341 107 aa12.12□□□□□ -0.47
SMARCAL1-209ENST00000444508 MRPL23Q16540 153 aaKnown RBP12.12□□□□□ -0.47
SMARCAL1-209ENST00000444508 LINC00588Q9Y4M8 146 aa12.12□□□□□ -0.47
SMARCAL1-209ENST00000444508 NACAE9PAV3 2078 aa12.11□□□□□ -0.47
SMARCAL1-209ENST00000444508 MED14OSP0DP75 135 aa12.11□□□□□ -0.47
SMARCAL1-209ENST00000444508 GYPEP15421 78 aa12.11□□□□□ -0.47
SMARCAL1-209ENST00000444508 GATA1P15976 413 aaPredicted RBP12.11□□□□□ -0.47
SMARCAL1-209ENST00000444508 ZNF575Q86XF7 245 aa12.11□□□□□ -0.47
SMARCAL1-209ENST00000444508 ZFP82Q8N141 532 aa12.11□□□□□ -0.47
SMARCAL1-209ENST00000444508 FAM210AQ96ND0 272 aa12.11□□□□□ -0.47
SMARCAL1-209ENST00000444508 SCRT2Q9NQ03 307 aa12.11□□□□□ -0.47
SMARCAL1-209ENST00000444508 IGHV3-73A0A0B4J1V6 119 aa12.1□□□□□ -0.47
SMARCAL1-209ENST00000444508 M0R381 172 aa12.1□□□□□ -0.47
SMARCAL1-209ENST00000444508 SRIP30626 198 aa12.1□□□□□ -0.47
SMARCAL1-209ENST00000444508 CEBPGP53567 150 aa12.1□□□□□ -0.47
SMARCAL1-209ENST00000444508 DMRTA1Q5VZB9 504 aa12.1□□□□□ -0.47
SMARCAL1-209ENST00000444508 PARLQ9H300 379 aa12.1□□□□□ -0.47
SMARCAL1-209ENST00000444508 IGLV2-18A0A075B6J9 118 aa12.09□□□□□ -0.47
SMARCAL1-209ENST00000444508 P01737 135 aa12.09□□□□□ -0.47
SMARCAL1-209ENST00000444508 RPS20P60866 119 aaKnown RBP12.09□□□□□ -0.47
SMARCAL1-209ENST00000444508 ESRGQ1W209 222 aa12.09□□□□□ -0.47
SMARCAL1-209ENST00000444508 ZFP2Q6ZN57 461 aa12.09□□□□□ -0.47
SMARCAL1-209ENST00000444508 TRBV6-4A0A1B0GX49 114 aa12.08□□□□□ -0.48
SMARCAL1-209ENST00000444508 C19orf71A6NCJ1 209 aa12.08□□□□□ -0.48
SMARCAL1-209ENST00000444508 K7EQD1 137 aa12.08□□□□□ -0.48
SMARCAL1-209ENST00000444508 M0R2N4 97 aa12.08□□□□□ -0.48
SMARCAL1-209ENST00000444508 NDUFS6O75380 124 aaKnown RBP12.08□□□□□ -0.48
SMARCAL1-209ENST00000444508 RHOHQ15669 191 aa12.08□□□□□ -0.48
SMARCAL1-209ENST00000444508 NEGR1Q7Z3B1 354 aa12.08□□□□□ -0.48
SMARCAL1-209ENST00000444508 OR2D3Q8NGH3 330 aa12.08□□□□□ -0.48
SMARCAL1-209ENST00000444508 ZNRF2Q8NHG8 242 aa12.08□□□□□ -0.48
SMARCAL1-209ENST00000444508 PRADC1Q9BSG0 188 aa12.08□□□□□ -0.48
SMARCAL1-209ENST00000444508 DNAH10Q8IVF4 4471 aa12.07□□□□□ -0.48
SMARCAL1-209ENST00000444508 XKRY2A2RUG3 117 aa12.07□□□□□ -0.48
SMARCAL1-209ENST00000444508 RHODO00212 210 aa12.07□□□□□ -0.48
SMARCAL1-209ENST00000444508 OR5AL1P0C617 328 aa12.07□□□□□ -0.48
SMARCAL1-209ENST00000444508 SLC25A29Q8N8R3 303 aa12.07□□□□□ -0.48
SMARCAL1-209ENST00000444508 JPT2Q9H910 190 aa12.07□□□□□ -0.48
SMARCAL1-209ENST00000444508 MRPS16Q9Y3D3 137 aaKnown RBP12.07□□□□□ -0.48
SMARCAL1-209ENST00000444508 SNAI2O43623 268 aa12.06□□□□□ -0.48
SMARCAL1-209ENST00000444508 SPANXN1Q5VSR9 72 aa12.06□□□□□ -0.48
SMARCAL1-209ENST00000444508 SH2D6Q7Z4S9 175 aa12.06□□□□□ -0.48
SMARCAL1-209ENST00000444508 OR10AG1Q8NH19 301 aa12.06□□□□□ -0.48
SMARCAL1-209ENST00000444508 OCC1Q8TAD7 63 aa12.06□□□□□ -0.48
SMARCAL1-209ENST00000444508 SFRP2Q96HF1 295 aa12.06□□□□□ -0.48
SMARCAL1-209ENST00000444508 LOC100131303A0A0U1RQF7 123 aa12.05□□□□□ -0.48
SMARCAL1-209ENST00000444508 FAM74A4Q5TZK3 123 aa12.05□□□□□ -0.48
SMARCAL1-209ENST00000444508 SMIM7Q9BQ49 75 aa12.05□□□□□ -0.48
SMARCAL1-209ENST00000444508 UPK3BQ9BT76 320 aa12.05□□□□□ -0.48
SMARCAL1-209ENST00000444508 TPPP3Q9BW30 176 aa12.05□□□□□ -0.48
SMARCAL1-209ENST00000444508 SSBP4Q9BWG4 385 aaPredicted RBP12.05□□□□□ -0.48
SMARCAL1-209ENST00000444508 SAMD10Q9BYL1 202 aa12.05□□□□□ -0.48
SMARCAL1-209ENST00000444508 K7EN84 100 aa12.04□□□□□ -0.48
SMARCAL1-209ENST00000444508 NXPH4O95158 308 aa12.04□□□□□ -0.48
SMARCAL1-209ENST00000444508 SRP19P09132 144 aaKnown RBP12.04□□□□□ -0.48
SMARCAL1-209ENST00000444508 GZMBP10144 247 aa12.04□□□□□ -0.48
SMARCAL1-209ENST00000444508 LYPD5Q6UWN5 251 aa12.04□□□□□ -0.48
SMARCAL1-209ENST00000444508 FER1L6-AS1Q8NA97 138 aa12.04□□□□□ -0.48
SMARCAL1-209ENST00000444508 NUDT10Q8NFP7 164 aa12.04□□□□□ -0.48
SMARCAL1-209ENST00000444508 NUDT11Q96G61 164 aa12.04□□□□□ -0.48
SMARCAL1-209ENST00000444508 Q9H8V8 135 aa12.04□□□□□ -0.48
SMARCAL1-209ENST00000444508 A0A087WWL8 130 aa12.03□□□□□ -0.48
SMARCAL1-209ENST00000444508 MUC21A0A0G2JKD1 596 aa12.03□□□□□ -0.48
SMARCAL1-209ENST00000444508 MUC21A0A140T8X8 626 aa12.03□□□□□ -0.48
SMARCAL1-209ENST00000444508 UFSP1Q6NVU6 142 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms