RNA–Protein interactions for RNA: ENST00000444440.1

SF3A1-203, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 5

Gene SF3A1, Length 777 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-203ENST00000444440 AKR1C3P42330 323 aa7.43□□□□□ -1.22
SF3A1-203ENST00000444440 SULT1A2P50226 295 aa7.43□□□□□ -1.22
SF3A1-203ENST00000444440 Q6ZRN7 208 aaPredicted RBP7.43□□□□□ -1.22
SF3A1-203ENST00000444440 Q86TA4 180 aa7.43□□□□□ -1.22
SF3A1-203ENST00000444440 TXNDC17Q9BRA2 123 aa7.43□□□□□ -1.22
SF3A1-203ENST00000444440 KRTAP4-5Q9BYR2 181 aa7.43□□□□□ -1.22
SF3A1-203ENST00000444440 MANBALQ9NQG1 85 aa7.43□□□□□ -1.22
SF3A1-203ENST00000444440 TNFRSF18Q9Y5U5 241 aa7.43□□□□□ -1.22
SF3A1-203ENST00000444440 FAT1Q14517 4588 aa7.42□□□□□ -1.22
SF3A1-203ENST00000444440 TRAV4A0A0B4J268 109 aa7.42□□□□□ -1.22
SF3A1-203ENST00000444440 NXPH4O95158 308 aa7.42□□□□□ -1.22
SF3A1-203ENST00000444440 ORM1P02763 201 aa7.42□□□□□ -1.22
SF3A1-203ENST00000444440 LINC00315P59091 139 aa7.42□□□□□ -1.22
SF3A1-203ENST00000444440 FAM162BQ5T6X4 162 aa7.42□□□□□ -1.22
SF3A1-203ENST00000444440 LYPD5Q6UWN5 251 aa7.42□□□□□ -1.22
SF3A1-203ENST00000444440 OR4C5Q8NGB2 326 aa7.42□□□□□ -1.22
SF3A1-203ENST00000444440 A0A1W2PPQ1 181 aa7.41□□□□□ -1.22
SF3A1-203ENST00000444440 SIVA1O15304 175 aa7.41□□□□□ -1.22
SF3A1-203ENST00000444440 CIDEAO60543 219 aa7.41□□□□□ -1.22
SF3A1-203ENST00000444440 IFNA1P01562 189 aa7.41□□□□□ -1.22
SF3A1-203ENST00000444440 S100A4P26447 101 aaKnown RBP7.41□□□□□ -1.22
SF3A1-203ENST00000444440 KRTAP10-2P60368 255 aa7.41□□□□□ -1.22
SF3A1-203ENST00000444440 ZNF876PQ49A33 203 aa7.41□□□□□ -1.22
SF3A1-203ENST00000444440 TTC32Q5I0X7 151 aa7.41□□□□□ -1.22
SF3A1-203ENST00000444440 COX8CQ7Z4L0 72 aa7.41□□□□□ -1.22
SF3A1-203ENST00000444440 GNG13Q9P2W3 67 aa7.41□□□□□ -1.22
SF3A1-203ENST00000444440 C16orf90A8MZG2 172 aa7.4□□□□□ -1.22
SF3A1-203ENST00000444440 B4DEV8 164 aa7.4□□□□□ -1.22
SF3A1-203ENST00000444440 C9JCJ5 164 aa7.4□□□□□ -1.22
SF3A1-203ENST00000444440 LTAP01374 205 aa7.4□□□□□ -1.22
SF3A1-203ENST00000444440 RNASE3P12724 160 aaKnown RBP7.4□□□□□ -1.22
SF3A1-203ENST00000444440 GYPEP15421 78 aa7.4□□□□□ -1.22
SF3A1-203ENST00000444440 FUSP35637 526 aaKnown RBP eCLIP7.4□□□□□ -1.22
SF3A1-203ENST00000444440 MRPL23Q16540 153 aaKnown RBP7.4□□□□□ -1.22
SF3A1-203ENST00000444440 BAGE2Q86Y30 109 aa7.4□□□□□ -1.22
SF3A1-203ENST00000444440 WFDC10BQ8IUB3 73 aa7.4□□□□□ -1.22
SF3A1-203ENST00000444440 C9orf62Q8N4C0 152 aa7.4□□□□□ -1.22
SF3A1-203ENST00000444440 PTH2Q96A98 100 aa7.4□□□□□ -1.22
SF3A1-203ENST00000444440 ZC2HC1AQ96GY0 325 aa7.4□□□□□ -1.22
SF3A1-203ENST00000444440 C9orf85Q96MD7 179 aa7.4□□□□□ -1.22
SF3A1-203ENST00000444440 IGKV3D-20A0A0C4DH25 116 aa7.39□□□□□ -1.23
SF3A1-203ENST00000444440 SCO2A0A1W2PP80 73 aa7.39□□□□□ -1.23
SF3A1-203ENST00000444440 PGPEP1LA6NFU8 196 aa7.39□□□□□ -1.23
SF3A1-203ENST00000444440 GATA1P15976 413 aaPredicted RBP7.39□□□□□ -1.23
SF3A1-203ENST00000444440 TAGLN2P37802 199 aaKnown RBP7.39□□□□□ -1.23
SF3A1-203ENST00000444440 ASIPP42127 132 aa7.39□□□□□ -1.23
SF3A1-203ENST00000444440 CCL20P78556 96 aa7.39□□□□□ -1.23
SF3A1-203ENST00000444440 NEGR1Q7Z3B1 354 aa7.39□□□□□ -1.23
SF3A1-203ENST00000444440 SPATA12Q7Z6I5 190 aa7.39□□□□□ -1.23
SF3A1-203ENST00000444440 PCNPQ8WW12 178 aaKnown RBP7.39□□□□□ -1.23
SF3A1-203ENST00000444440 IGHV3-73A0A0B4J1V6 119 aa7.38□□□□□ -1.23
SF3A1-203ENST00000444440 KRBOX1C9JBD0 128 aa7.38□□□□□ -1.23
SF3A1-203ENST00000444440 PDE6DO43924 150 aa7.38□□□□□ -1.23
SF3A1-203ENST00000444440 SH2D1AO60880 128 aa7.38□□□□□ -1.23
SF3A1-203ENST00000444440 SRIP30626 198 aa7.38□□□□□ -1.23
SF3A1-203ENST00000444440 CRIP1P50238 77 aa7.38□□□□□ -1.23
SF3A1-203ENST00000444440 BLOC1S1P78537 153 aa7.38□□□□□ -1.23
SF3A1-203ENST00000444440 ZNF674Q2M3X9 581 aa7.38□□□□□ -1.23
SF3A1-203ENST00000444440 ZNF506Q5JVG8 444 aa7.38□□□□□ -1.23
SF3A1-203ENST00000444440 PIK3CD-AS1Q5SR53 167 aa7.38□□□□□ -1.23
SF3A1-203ENST00000444440 CFAP126Q5VTH2 177 aa7.38□□□□□ -1.23
SF3A1-203ENST00000444440 IL36BQ9NZH7 164 aa7.38□□□□□ -1.23
SF3A1-203ENST00000444440 M0R036 132 aa7.37□□□□□ -1.23
SF3A1-203ENST00000444440 RS1O15537 224 aa7.37□□□□□ -1.23
SF3A1-203ENST00000444440 BTF3P20290 206 aaKnown RBP7.37□□□□□ -1.23
SF3A1-203ENST00000444440 DNLZQ5SXM8 178 aa7.37□□□□□ -1.23
SF3A1-203ENST00000444440 SH2D6Q7Z4S9 175 aa7.37□□□□□ -1.23
SF3A1-203ENST00000444440 SLC25A29Q8N8R3 303 aa7.37□□□□□ -1.23
SF3A1-203ENST00000444440 SYT8Q8NBV8 401 aa7.37□□□□□ -1.23
SF3A1-203ENST00000444440 VAX2Q9UIW0 290 aa7.37□□□□□ -1.23
SF3A1-203ENST00000444440 A0A1B0GVG6 124 aa7.36□□□□□ -1.23
SF3A1-203ENST00000444440 A8MWV9 139 aa7.36□□□□□ -1.23
SF3A1-203ENST00000444440 RPL35P42766 123 aaKnown RBP7.36□□□□□ -1.23
SF3A1-203ENST00000444440 MEF2BQ02080 365 aaPredicted RBP7.36□□□□□ -1.23
SF3A1-203ENST00000444440 LINC01559Q495D7 138 aa7.36□□□□□ -1.23
SF3A1-203ENST00000444440 Q6ZSN1 163 aa7.36□□□□□ -1.23
SF3A1-203ENST00000444440 C11orf52Q96A22 123 aa7.36□□□□□ -1.23
SF3A1-203ENST00000444440 PRADC1Q9BSG0 188 aa7.36□□□□□ -1.23
SF3A1-203ENST00000444440 MLST8Q9BVC4 326 aa7.36□□□□□ -1.23
SF3A1-203ENST00000444440 JPT2Q9H910 190 aa7.36□□□□□ -1.23
SF3A1-203ENST00000444440 Q9UF83 564 aa7.36□□□□□ -1.23
SF3A1-203ENST00000444440 PHLDA3Q9Y5J5 127 aa7.36□□□□□ -1.23
SF3A1-203ENST00000444440 GRIFINA4D1Z8 144 aa7.35□□□□□ -1.23
SF3A1-203ENST00000444440 H3BVH4 76 aa7.35□□□□□ -1.23
SF3A1-203ENST00000444440 ARMS2P0C7Q2 107 aa7.35□□□□□ -1.23
SF3A1-203ENST00000444440 DNAH10OSP0CZ25 163 aa7.35□□□□□ -1.23
SF3A1-203ENST00000444440 BCL2P10415 239 aa7.35□□□□□ -1.23
SF3A1-203ENST00000444440 ALKAL2Q6UX46 152 aa7.35□□□□□ -1.23
SF3A1-203ENST00000444440 NHLRC2Q8NBF2 726 aa7.35□□□□□ -1.23
SF3A1-203ENST00000444440 DAZAP1Q96EP5 407 aaKnown RBP7.35□□□□□ -1.23
SF3A1-203ENST00000444440 BIN3Q9NQY0 253 aa7.35□□□□□ -1.23
SF3A1-203ENST00000444440 MED9Q9NWA0 146 aa7.35□□□□□ -1.23
SF3A1-203ENST00000444440 TMSB15BA0A087X1C1 80 aa7.34□□□□□ -1.23
SF3A1-203ENST00000444440 TRBV6-4A0A1B0GX49 114 aa7.34□□□□□ -1.23
SF3A1-203ENST00000444440 CDK2AP2O75956 126 aa7.34□□□□□ -1.23
SF3A1-203ENST00000444440 MGST1P10620 155 aaKnown RBP7.34□□□□□ -1.23
SF3A1-203ENST00000444440 GNG4P50150 75 aa7.34□□□□□ -1.23
SF3A1-203ENST00000444440 UFSP1Q6NVU6 142 aa7.34□□□□□ -1.23
SF3A1-203ENST00000444440 ZFP2Q6ZN57 461 aa7.34□□□□□ -1.23
SF3A1-203ENST00000444440 SMIM12Q96EX1 92 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms