RNA–Protein interactions for RNA: ENST00000444061.7

SMARCA4-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 4,938 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-204ENST00000444061 NCR2O95944 276 aa10.84□□□□□ -0.67
SMARCA4-204ENST00000444061 IFI27L1Q96BM0 104 aa10.84□□□□□ -0.67
SMARCA4-204ENST00000444061 ANKRD17O75179 2603 aaKnown RBP10.84□□□□□ -0.67
SMARCA4-204ENST00000444061 ADARB2-AS1A8MUL3 147 aa10.83□□□□□ -0.68
SMARCA4-204ENST00000444061 GAGE13Q4V321 117 aa10.83□□□□□ -0.68
SMARCA4-204ENST00000444061 MPV17L2Q567V2 206 aa10.83□□□□□ -0.68
SMARCA4-204ENST00000444061 PCSK5Q92824 1860 aa10.83□□□□□ -0.68
SMARCA4-204ENST00000444061 MEIG1Q5JSS6 88 aa10.83□□□□□ -0.68
SMARCA4-204ENST00000444061 C1orf159Q96HA4 380 aa10.83□□□□□ -0.68
SMARCA4-204ENST00000444061 RBAKDNA6NC62 111 aa10.82□□□□□ -0.68
SMARCA4-204ENST00000444061 SYS1-DBNDD2H3BUS1 97 aa10.82□□□□□ -0.68
SMARCA4-204ENST00000444061 TOMM7Q9P0U1 55 aa10.82□□□□□ -0.68
SMARCA4-204ENST00000444061 H3BRM9 83 aa10.82□□□□□ -0.68
SMARCA4-204ENST00000444061 MALP21145 153 aa10.82□□□□□ -0.68
SMARCA4-204ENST00000444061 ANAPC13Q9BS18 74 aa10.82□□□□□ -0.68
SMARCA4-204ENST00000444061 IGHV3-16A0A0C4DH30 117 aa10.82□□□□□ -0.68
SMARCA4-204ENST00000444061 APOMO95445 188 aa10.82□□□□□ -0.68
SMARCA4-204ENST00000444061 SPANXA1Q9NS26 97 aa10.82□□□□□ -0.68
SMARCA4-204ENST00000444061 TSPAN13O95857 204 aa10.82□□□□□ -0.68
SMARCA4-204ENST00000444061 SORL1Q92673 2214 aa10.82□□□□□ -0.68
SMARCA4-204ENST00000444061 F8P00451 2351 aa10.81□□□□□ -0.68
SMARCA4-204ENST00000444061 IGKCP01834 107 aa10.81□□□□□ -0.68
SMARCA4-204ENST00000444061 MORN5Q5VZ52 161 aa10.81□□□□□ -0.68
SMARCA4-204ENST00000444061 D6R8Y8 96 aa10.81□□□□□ -0.68
SMARCA4-204ENST00000444061 VCYO14598 125 aa10.81□□□□□ -0.68
SMARCA4-204ENST00000444061 CRXO43186 299 aaPredicted RBP10.81□□□□□ -0.68
SMARCA4-204ENST00000444061 OCIAD2Q56VL3 154 aa10.81□□□□□ -0.68
SMARCA4-204ENST00000444061 GFRA4Q9GZZ7 299 aa10.81□□□□□ -0.68
SMARCA4-204ENST00000444061 LGALS9O00182 355 aa10.81□□□□□ -0.68
SMARCA4-204ENST00000444061 PHLDA1Q8WV24 401 aaPredicted RBP10.81□□□□□ -0.68
SMARCA4-204ENST00000444061 GAGE12JA6NER3 117 aa10.8□□□□□ -0.68
SMARCA4-204ENST00000444061 GAGE4Q13068 117 aa10.8□□□□□ -0.68
SMARCA4-204ENST00000444061 GAGE5Q13069 117 aa10.8□□□□□ -0.68
SMARCA4-204ENST00000444061 CFAP161Q6P656 301 aa10.8□□□□□ -0.68
SMARCA4-204ENST00000444061 C11orf52Q96A22 123 aa10.8□□□□□ -0.68
SMARCA4-204ENST00000444061 A0A0C4DFX4 3053 aa10.8□□□□□ -0.68
SMARCA4-204ENST00000444061 NDUFA7O95182 113 aa10.8□□□□□ -0.68
SMARCA4-204ENST00000444061 PSMB8P28062 276 aa10.8□□□□□ -0.68
SMARCA4-204ENST00000444061 Q6ZS46 218 aa10.8□□□□□ -0.68
SMARCA4-204ENST00000444061 ZNF292O60281 2723 aa10.8□□□□□ -0.68
SMARCA4-204ENST00000444061 PAX2Q02962 417 aa10.8□□□□□ -0.68
SMARCA4-204ENST00000444061 NOP10Q9NPE3 64 aaKnown RBP10.8□□□□□ -0.68
SMARCA4-204ENST00000444061 IGLC2P0DOY2 106 aa10.8□□□□□ -0.68
SMARCA4-204ENST00000444061 IGLC3P0DOY3 106 aa10.8□□□□□ -0.68
SMARCA4-204ENST00000444061 CT83Q5H943 113 aa10.8□□□□□ -0.68
SMARCA4-204ENST00000444061 ZNF493Q6ZR52 646 aa10.8□□□□□ -0.68
SMARCA4-204ENST00000444061 ZC2HC1AQ96GY0 325 aa10.8□□□□□ -0.68
SMARCA4-204ENST00000444061 FAM231BA6NCW3 169 aa10.79□□□□□ -0.68
SMARCA4-204ENST00000444061 RNF152Q8N8N0 203 aa10.79□□□□□ -0.68
SMARCA4-204ENST00000444061 MRAP2Q96G30 205 aa10.79□□□□□ -0.68
SMARCA4-204ENST00000444061 CST9LQ9H4G1 147 aa10.79□□□□□ -0.68
SMARCA4-204ENST00000444061 RAI1Q7Z5J4 1906 aaPredicted RBP10.79□□□□□ -0.68
SMARCA4-204ENST00000444061 SLAQ13239 276 aa10.79□□□□□ -0.68
SMARCA4-204ENST00000444061 COA6Q5JTJ3 125 aaKnown RBP10.79□□□□□ -0.68
SMARCA4-204ENST00000444061 PSCAO43653 123 aa10.79□□□□□ -0.68
SMARCA4-204ENST00000444061 IGLL1P15814 213 aa10.79□□□□□ -0.68
SMARCA4-204ENST00000444061 PRR31Q5SQ13 230 aa10.79□□□□□ -0.68
SMARCA4-204ENST00000444061 AMN1Q8IY45 258 aa10.79□□□□□ -0.68
SMARCA4-204ENST00000444061 TRAV8-2A0A0B4J237 113 aa10.78□□□□□ -0.68
SMARCA4-204ENST00000444061 DEFB104AQ8WTQ1 72 aa10.78□□□□□ -0.68
SMARCA4-204ENST00000444061 DEFB135Q30KP9 77 aa10.78□□□□□ -0.68
SMARCA4-204ENST00000444061 TRPT1Q86TN4 253 aaKnown RBP10.78□□□□□ -0.68
SMARCA4-204ENST00000444061 SPART-AS1P0CW21 52 aa10.78□□□□□ -0.68
SMARCA4-204ENST00000444061 TEX48A0A1B0GUV7 120 aa10.77□□□□□ -0.68
SMARCA4-204ENST00000444061 M0R2P5 195 aa10.77□□□□□ -0.68
SMARCA4-204ENST00000444061 NPSP0C0P6 89 aa10.77□□□□□ -0.68
SMARCA4-204ENST00000444061 IGKV1D-37A0A075B6S9 117 aa10.77□□□□□ -0.69
SMARCA4-204ENST00000444061 TEX43Q6ZNM6 134 aa10.77□□□□□ -0.69
SMARCA4-204ENST00000444061 IGF2BP2-AS1Q96M15 143 aa10.77□□□□□ -0.69
SMARCA4-204ENST00000444061 CKS1BP61024 79 aa10.77□□□□□ -0.69
SMARCA4-204ENST00000444061 DEFB114Q30KQ6 69 aa10.77□□□□□ -0.69
SMARCA4-204ENST00000444061 FAM167A-AS1Q96KT0 104 aa10.77□□□□□ -0.69
SMARCA4-204ENST00000444061 PRUNE2Q8WUY3 3088 aa10.77□□□□□ -0.69
SMARCA4-204ENST00000444061 PRSS46E5RG02 174 aa10.77□□□□□ -0.69
SMARCA4-204ENST00000444061 DNAL4O96015 105 aa10.77□□□□□ -0.69
SMARCA4-204ENST00000444061 ASPHD1Q5U4P2 390 aa10.77□□□□□ -0.69
SMARCA4-204ENST00000444061 DEFB125Q8N687 156 aa10.77□□□□□ -0.69
SMARCA4-204ENST00000444061 TMEM213A2RRL7 107 aa10.76□□□□□ -0.69
SMARCA4-204ENST00000444061 PAX4O43316 350 aa10.76□□□□□ -0.69
SMARCA4-204ENST00000444061 HIST2H2BDQ6DRA6 164 aa10.76□□□□□ -0.69
SMARCA4-204ENST00000444061 ZFAND6Q6FIF0 208 aa10.76□□□□□ -0.69
SMARCA4-204ENST00000444061 FAM231DQ6ZW35 169 aa10.76□□□□□ -0.69
SMARCA4-204ENST00000444061 U3KQE9 123 aa10.76□□□□□ -0.69
SMARCA4-204ENST00000444061 LAGE3Q14657 143 aa10.76□□□□□ -0.69
SMARCA4-204ENST00000444061 hDV102S1A0JD36 115 aa10.76□□□□□ -0.69
SMARCA4-204ENST00000444061 KIR3DS1Q14943 382 aa10.76□□□□□ -0.69
SMARCA4-204ENST00000444061 MAP6D1Q9H9H5 199 aa10.76□□□□□ -0.69
SMARCA4-204ENST00000444061 IGKV3D-20A0A0C4DH25 116 aa10.75□□□□□ -0.69
SMARCA4-204ENST00000444061 A0A087X0K7 114 aa10.75□□□□□ -0.69
SMARCA4-204ENST00000444061 GNRH2O43555 120 aa10.75□□□□□ -0.69
SMARCA4-204ENST00000444061 LTAP01374 205 aa10.75□□□□□ -0.69
SMARCA4-204ENST00000444061 C16orf74Q96GX8 76 aa10.75□□□□□ -0.69
SMARCA4-204ENST00000444061 ZNRF2Q8NHG8 242 aa10.75□□□□□ -0.69
SMARCA4-204ENST00000444061 GAGE2BQ13066 116 aa10.74□□□□□ -0.69
SMARCA4-204ENST00000444061 GAGE2EQ4V326 116 aa10.74□□□□□ -0.69
SMARCA4-204ENST00000444061 Q6ZWC4 215 aa10.74□□□□□ -0.69
SMARCA4-204ENST00000444061 GAGE2DQ9UEU5 116 aa10.74□□□□□ -0.69
SMARCA4-204ENST00000444061 KIR2DL5BA0A0G2JN68 375 aa10.74□□□□□ -0.69
SMARCA4-204ENST00000444061 KIR2DL5BA0A0G2JPC4 375 aa10.74□□□□□ -0.69
SMARCA4-204ENST00000444061 PRAC2D3DTV9 90 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms