RNA–Protein interactions for RNA: ENST00000443574.1

HLA-DQB1-206, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

Gene HLA-DQB1, Length 309 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-206ENST00000443574 M0R036 132 aa7.23□□□□□ -1.25
HLA-DQB1-206ENST00000443574 RPL35P42766 123 aaKnown RBP7.23□□□□□ -1.25
HLA-DQB1-206ENST00000443574 NKX2-5P52952 324 aaPredicted RBP7.23□□□□□ -1.25
HLA-DQB1-206ENST00000443574 ZNF674Q2M3X9 581 aa7.23□□□□□ -1.25
HLA-DQB1-206ENST00000443574 NHLRC2Q8NBF2 726 aa7.23□□□□□ -1.25
HLA-DQB1-206ENST00000443574 SMIM12Q96EX1 92 aa7.23□□□□□ -1.25
HLA-DQB1-206ENST00000443574 C9orf85Q96MD7 179 aa7.23□□□□□ -1.25
HLA-DQB1-206ENST00000443574 IL36BQ9NZH7 164 aa7.23□□□□□ -1.25
HLA-DQB1-206ENST00000443574 C11orf21Q9P2W6 132 aa7.23□□□□□ -1.25
HLA-DQB1-206ENST00000443574 HHLA3Q9XRX5 114 aa7.23□□□□□ -1.25
HLA-DQB1-206ENST00000443574 KMT2AQ03164 3969 aa7.23□□□□□ -1.25
HLA-DQB1-206ENST00000443574 IGKV3D-20A0A0C4DH25 116 aa7.22□□□□□ -1.25
HLA-DQB1-206ENST00000443574 A8MWV9 139 aa7.22□□□□□ -1.25
HLA-DQB1-206ENST00000443574 H3BVH4 76 aa7.22□□□□□ -1.25
HLA-DQB1-206ENST00000443574 SFTA3P0C7M3 94 aa7.22□□□□□ -1.25
HLA-DQB1-206ENST00000443574 GNG4P50150 75 aa7.22□□□□□ -1.25
HLA-DQB1-206ENST00000443574 CRYBA4P53673 196 aa7.22□□□□□ -1.25
HLA-DQB1-206ENST00000443574 CCL20P78556 96 aa7.22□□□□□ -1.25
HLA-DQB1-206ENST00000443574 MRPL23Q16540 153 aaKnown RBP7.22□□□□□ -1.25
HLA-DQB1-206ENST00000443574 CENPWQ5EE01 88 aa7.22□□□□□ -1.25
HLA-DQB1-206ENST00000443574 PIK3CD-AS1Q5SR53 167 aa7.22□□□□□ -1.25
HLA-DQB1-206ENST00000443574 PRR27Q6MZM9 219 aa7.22□□□□□ -1.25
HLA-DQB1-206ENST00000443574 PTH2Q96A98 100 aa7.22□□□□□ -1.25
HLA-DQB1-206ENST00000443574 ZNF479Q96JC4 524 aa7.22□□□□□ -1.25
HLA-DQB1-206ENST00000443574 BIN3Q9NQY0 253 aa7.22□□□□□ -1.25
HLA-DQB1-206ENST00000443574 PHLDA3Q9Y5J5 127 aa7.22□□□□□ -1.25
HLA-DQB1-206ENST00000443574 KRBOX1C9JBD0 128 aa7.21□□□□□ -1.26
HLA-DQB1-206ENST00000443574 RNASE3P12724 160 aaKnown RBP7.21□□□□□ -1.26
HLA-DQB1-206ENST00000443574 SRIP30626 198 aa7.21□□□□□ -1.26
HLA-DQB1-206ENST00000443574 FHL2Q14192 279 aa7.21□□□□□ -1.26
HLA-DQB1-206ENST00000443574 SOHLH1Q5JUK2 328 aa7.21□□□□□ -1.26
HLA-DQB1-206ENST00000443574 ZNF506Q5JVG8 444 aa7.21□□□□□ -1.26
HLA-DQB1-206ENST00000443574 DNLZQ5SXM8 178 aa7.21□□□□□ -1.26
HLA-DQB1-206ENST00000443574 VSIG2Q96IQ7 327 aa7.21□□□□□ -1.26
HLA-DQB1-206ENST00000443574 MED9Q9NWA0 146 aa7.21□□□□□ -1.26
HLA-DQB1-206ENST00000443574 TMSB15BA0A087X1C1 80 aa7.2□□□□□ -1.26
HLA-DQB1-206ENST00000443574 A0A096LPF7 62 aa7.2□□□□□ -1.26
HLA-DQB1-206ENST00000443574 RHODO00212 210 aa7.2□□□□□ -1.26
HLA-DQB1-206ENST00000443574 CXCL1P09341 107 aa7.2□□□□□ -1.26
HLA-DQB1-206ENST00000443574 MED14OSP0DP75 135 aa7.2□□□□□ -1.26
HLA-DQB1-206ENST00000443574 MGST1P10620 155 aaKnown RBP7.2□□□□□ -1.26
HLA-DQB1-206ENST00000443574 CRIP1P50238 77 aa7.2□□□□□ -1.26
HLA-DQB1-206ENST00000443574 RHOHQ15669 191 aa7.2□□□□□ -1.26
HLA-DQB1-206ENST00000443574 TTC32Q5I0X7 151 aa7.2□□□□□ -1.26
HLA-DQB1-206ENST00000443574 NEGR1Q7Z3B1 354 aa7.2□□□□□ -1.26
HLA-DQB1-206ENST00000443574 SH2D6Q7Z4S9 175 aa7.2□□□□□ -1.26
HLA-DQB1-206ENST00000443574 ZFP82Q8N141 532 aa7.2□□□□□ -1.26
HLA-DQB1-206ENST00000443574 DAZAP1Q96EP5 407 aaKnown RBP7.2□□□□□ -1.26
HLA-DQB1-206ENST00000443574 DERL1Q9BUN8 251 aa7.2□□□□□ -1.26
HLA-DQB1-206ENST00000443574 MLST8Q9BVC4 326 aa7.2□□□□□ -1.26
HLA-DQB1-206ENST00000443574 IGLV2-18A0A075B6J9 118 aa7.19□□□□□ -1.26
HLA-DQB1-206ENST00000443574 XKRY2A2RUG3 117 aa7.19□□□□□ -1.26
HLA-DQB1-206ENST00000443574 GRIFINA4D1Z8 144 aa7.19□□□□□ -1.26
HLA-DQB1-206ENST00000443574 RS1O15537 224 aa7.19□□□□□ -1.26
HLA-DQB1-206ENST00000443574 ARMS2P0C7Q2 107 aa7.19□□□□□ -1.26
HLA-DQB1-206ENST00000443574 CFAP126Q5VTH2 177 aa7.19□□□□□ -1.26
HLA-DQB1-206ENST00000443574 PRADC1Q9BSG0 188 aa7.19□□□□□ -1.26
HLA-DQB1-206ENST00000443574 UPK3BQ9BT76 320 aa7.19□□□□□ -1.26
HLA-DQB1-206ENST00000443574 MRPS16Q9Y3D3 137 aaKnown RBP7.19□□□□□ -1.26
HLA-DQB1-206ENST00000443574 LINC00588Q9Y4M8 146 aa7.19□□□□□ -1.26
HLA-DQB1-206ENST00000443574 TRBV6-4A0A1B0GX49 114 aa7.18□□□□□ -1.26
HLA-DQB1-206ENST00000443574 RBFOX3A6NFN3 312 aa7.18□□□□□ -1.26
HLA-DQB1-206ENST00000443574 PGPEP1LA6NFU8 196 aa7.18□□□□□ -1.26
HLA-DQB1-206ENST00000443574 TMEM250H0YL14 139 aa7.18□□□□□ -1.26
HLA-DQB1-206ENST00000443574 M0R381 172 aa7.18□□□□□ -1.26
HLA-DQB1-206ENST00000443574 GYPEP15421 78 aa7.18□□□□□ -1.26
HLA-DQB1-206ENST00000443574 GATA1P15976 413 aaPredicted RBP7.18□□□□□ -1.26
HLA-DQB1-206ENST00000443574 RPS20P60866 119 aaKnown RBP7.18□□□□□ -1.26
HLA-DQB1-206ENST00000443574 ZFP2Q6ZN57 461 aa7.18□□□□□ -1.26
HLA-DQB1-206ENST00000443574 ZNRF2Q8NHG8 242 aa7.18□□□□□ -1.26
HLA-DQB1-206ENST00000443574 EIF5A2Q9GZV4 153 aaKnown RBP7.18□□□□□ -1.26
HLA-DQB1-206ENST00000443574 K7EQD1 137 aa7.17□□□□□ -1.26
HLA-DQB1-206ENST00000443574 M0R2N4 97 aa7.17□□□□□ -1.26
HLA-DQB1-206ENST00000443574 P01737 135 aa7.17□□□□□ -1.26
HLA-DQB1-206ENST00000443574 TOR2AQ5JU69 321 aa7.17□□□□□ -1.26
HLA-DQB1-206ENST00000443574 LINC00336Q6ZUF6 198 aa7.17□□□□□ -1.26
HLA-DQB1-206ENST00000443574 LYPD6BQ8NI32 183 aa7.17□□□□□ -1.26
HLA-DQB1-206ENST00000443574 MRPL18Q9H0U6 180 aaKnown RBP7.17□□□□□ -1.26
HLA-DQB1-206ENST00000443574 PARLQ9H300 379 aa7.17□□□□□ -1.26
HLA-DQB1-206ENST00000443574 NBDYA0A0U1RRE5 68 aa7.16□□□□□ -1.26
HLA-DQB1-206ENST00000443574 NDUFS6O75380 124 aaKnown RBP7.16□□□□□ -1.26
HLA-DQB1-206ENST00000443574 RPL19P84098 196 aaKnown RBP7.16□□□□□ -1.26
HLA-DQB1-206ENST00000443574 ESRGQ1W209 222 aa7.16□□□□□ -1.26
HLA-DQB1-206ENST00000443574 FAM74A4Q5TZK3 123 aa7.16□□□□□ -1.26
HLA-DQB1-206ENST00000443574 SPANXN1Q5VSR9 72 aa7.16□□□□□ -1.26
HLA-DQB1-206ENST00000443574 FAM210AQ96ND0 272 aa7.16□□□□□ -1.26
HLA-DQB1-206ENST00000443574 SCRT2Q9NQ03 307 aa7.16□□□□□ -1.26
HLA-DQB1-206ENST00000443574 IGHV3-73A0A0B4J1V6 119 aa7.15□□□□□ -1.26
HLA-DQB1-206ENST00000443574 A0A1W2PPQ1 181 aa7.15□□□□□ -1.26
HLA-DQB1-206ENST00000443574 RAB19A4D1S5 217 aa7.15□□□□□ -1.26
HLA-DQB1-206ENST00000443574 SIVA1O15304 175 aa7.15□□□□□ -1.26
HLA-DQB1-206ENST00000443574 OR5AL1P0C617 328 aa7.15□□□□□ -1.26
HLA-DQB1-206ENST00000443574 CEBPGP53567 150 aa7.15□□□□□ -1.26
HLA-DQB1-206ENST00000443574 C1orf134Q5TEV5 83 aa7.15□□□□□ -1.26
HLA-DQB1-206ENST00000443574 Q6ZR54 194 aa7.15□□□□□ -1.26
HLA-DQB1-206ENST00000443574 SLC25A29Q8N8R3 303 aa7.15□□□□□ -1.26
HLA-DQB1-206ENST00000443574 OR2D3Q8NGH3 330 aa7.15□□□□□ -1.26
HLA-DQB1-206ENST00000443574 AP1S3Q96PC3 154 aa7.15□□□□□ -1.26
HLA-DQB1-206ENST00000443574 Q9H8V8 135 aa7.15□□□□□ -1.26
HLA-DQB1-206ENST00000443574 DNAH10Q8IVF4 4471 aa7.15□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms