RNA–Protein interactions for RNA: ENST00000440421.2

LTBR-202, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 729 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-202ENST00000440421 TRBV6-1A0A0K0K1D8 114 aa9.43□□□□□ -0.9
LTBR-202ENST00000440421 RS1O15537 224 aa9.43□□□□□ -0.9
LTBR-202ENST00000440421 LTAP01374 205 aa9.43□□□□□ -0.9
LTBR-202ENST00000440421 C1QBP02746 253 aa9.43□□□□□ -0.9
LTBR-202ENST00000440421 GATA1P15976 413 aaPredicted RBP9.43□□□□□ -0.9
LTBR-202ENST00000440421 CCL20P78556 96 aa9.43□□□□□ -0.9
LTBR-202ENST00000440421 FAM162BQ5T6X4 162 aa9.43□□□□□ -0.9
LTBR-202ENST00000440421 EIF5AL1Q6IS14 154 aaKnown RBP9.43□□□□□ -0.9
LTBR-202ENST00000440421 DNAH2Q9P225 4427 aa9.42□□□□□ -0.9
LTBR-202ENST00000440421 TMSB15BA0A087X1C1 80 aa9.42□□□□□ -0.9
LTBR-202ENST00000440421 GRIFINA4D1Z8 144 aa9.42□□□□□ -0.9
LTBR-202ENST00000440421 KRBOX1C9JBD0 128 aa9.42□□□□□ -0.9
LTBR-202ENST00000440421 H3BVH4 76 aa9.42□□□□□ -0.9
LTBR-202ENST00000440421 SIVA1O15304 175 aa9.42□□□□□ -0.9
LTBR-202ENST00000440421 TNP2Q05952 138 aa9.42□□□□□ -0.9
LTBR-202ENST00000440421 COX8CQ7Z4L0 72 aa9.42□□□□□ -0.9
LTBR-202ENST00000440421 AKAP14Q86UN6 197 aa9.42□□□□□ -0.9
LTBR-202ENST00000440421 TXNDC17Q9BRA2 123 aa9.42□□□□□ -0.9
LTBR-202ENST00000440421 GNG13Q9P2W3 67 aa9.42□□□□□ -0.9
LTBR-202ENST00000440421 RAB5CP51148 216 aa9.41□□□□□ -0.9
LTBR-202ENST00000440421 ZNF674Q2M3X9 581 aa9.41□□□□□ -0.9
LTBR-202ENST00000440421 SLC25A29Q8N8R3 303 aa9.41□□□□□ -0.9
LTBR-202ENST00000440421 PTH2Q96A98 100 aa9.41□□□□□ -0.9
LTBR-202ENST00000440421 FAT2Q9NYQ8 4349 aa9.4□□□□□ -0.9
LTBR-202ENST00000440421 A0A1W2PPQ1 181 aa9.4□□□□□ -0.9
LTBR-202ENST00000440421 S100A9P06702 114 aaKnown RBP9.4□□□□□ -0.9
LTBR-202ENST00000440421 ARMS2P0C7Q2 107 aa9.4□□□□□ -0.9
LTBR-202ENST00000440421 SULT1A2P50226 295 aa9.4□□□□□ -0.9
LTBR-202ENST00000440421 MANBALQ9NQG1 85 aa9.4□□□□□ -0.9
LTBR-202ENST00000440421 IL36BQ9NZH7 164 aa9.4□□□□□ -0.9
LTBR-202ENST00000440421 DNAH17Q9UFH2 4485 aa9.4□□□□□ -0.91
LTBR-202ENST00000440421 HECTD4Q9Y4D8 3996 aa9.39□□□□□ -0.91
LTBR-202ENST00000440421 TRAV1-1A0A0B4J248 108 aa9.39□□□□□ -0.91
LTBR-202ENST00000440421 CIDEAO60543 219 aa9.39□□□□□ -0.91
LTBR-202ENST00000440421 SLC51BQ86UW2 128 aa9.39□□□□□ -0.91
LTBR-202ENST00000440421 BAGE2Q86Y30 109 aa9.39□□□□□ -0.91
LTBR-202ENST00000440421 WFDC10BQ8IUB3 73 aa9.39□□□□□ -0.91
LTBR-202ENST00000440421 PRADC1Q9BSG0 188 aa9.39□□□□□ -0.91
LTBR-202ENST00000440421 PARLQ9H300 379 aa9.39□□□□□ -0.91
LTBR-202ENST00000440421 JPT2Q9H910 190 aa9.39□□□□□ -0.91
LTBR-202ENST00000440421 TRBV6-4A0A1B0GX49 114 aa9.38□□□□□ -0.91
LTBR-202ENST00000440421 A8MWV9 139 aa9.38□□□□□ -0.91
LTBR-202ENST00000440421 TEX46H3BTG2 121 aa9.38□□□□□ -0.91
LTBR-202ENST00000440421 RHOHQ15669 191 aa9.38□□□□□ -0.91
LTBR-202ENST00000440421 LINC01559Q495D7 138 aa9.38□□□□□ -0.91
LTBR-202ENST00000440421 DNLZQ5SXM8 178 aa9.38□□□□□ -0.91
LTBR-202ENST00000440421 DMRTA1Q5VZB9 504 aa9.38□□□□□ -0.91
LTBR-202ENST00000440421 PRR27Q6MZM9 219 aa9.38□□□□□ -0.91
LTBR-202ENST00000440421 Q6ZSN1 163 aa9.38□□□□□ -0.91
LTBR-202ENST00000440421 ZNF575Q86XF7 245 aa9.38□□□□□ -0.91
LTBR-202ENST00000440421 C9orf62Q8N4C0 152 aa9.38□□□□□ -0.91
LTBR-202ENST00000440421 SYT8Q8NBV8 401 aa9.38□□□□□ -0.91
LTBR-202ENST00000440421 MGST1P10620 155 aaKnown RBP9.37□□□□□ -0.91
LTBR-202ENST00000440421 RPL35P42766 123 aaKnown RBP9.37□□□□□ -0.91
LTBR-202ENST00000440421 LINC00315P59091 139 aa9.37□□□□□ -0.91
LTBR-202ENST00000440421 RPL19P84098 196 aaKnown RBP9.37□□□□□ -0.91
LTBR-202ENST00000440421 SH2D6Q7Z4S9 175 aa9.37□□□□□ -0.91
LTBR-202ENST00000440421 DERL1Q9BUN8 251 aa9.37□□□□□ -0.91
LTBR-202ENST00000440421 SAMD10Q9BYL1 202 aa9.37□□□□□ -0.91
LTBR-202ENST00000440421 PHLDA3Q9Y5J5 127 aa9.37□□□□□ -0.91
LTBR-202ENST00000440421 LY96Q9Y6Y9 160 aa9.37□□□□□ -0.91
LTBR-202ENST00000440421 M0R381 172 aa9.36□□□□□ -0.91
LTBR-202ENST00000440421 PIK3CD-AS1Q5SR53 167 aa9.36□□□□□ -0.91
LTBR-202ENST00000440421 FAM74A4Q5TZK3 123 aa9.36□□□□□ -0.91
LTBR-202ENST00000440421 ZFP2Q6ZN57 461 aa9.36□□□□□ -0.91
LTBR-202ENST00000440421 MLST8Q9BVC4 326 aa9.36□□□□□ -0.91
LTBR-202ENST00000440421 TNFRSF18Q9Y5U5 241 aa9.36□□□□□ -0.91
LTBR-202ENST00000440421 A0A087WWL8 130 aa9.35□□□□□ -0.91
LTBR-202ENST00000440421 C11orf52Q96A22 123 aa9.35□□□□□ -0.91
LTBR-202ENST00000440421 SCRT2Q9NQ03 307 aa9.35□□□□□ -0.91
LTBR-202ENST00000440421 TRAV9-2A0A087WT02 112 aa9.34□□□□□ -0.91
LTBR-202ENST00000440421 GAGE12JA6NER3 117 aa9.34□□□□□ -0.91
LTBR-202ENST00000440421 IFNA1P01562 189 aa9.34□□□□□ -0.91
LTBR-202ENST00000440421 MEF2BQ02080 365 aaPredicted RBP9.34□□□□□ -0.91
LTBR-202ENST00000440421 GAGE1Q13065 139 aa9.34□□□□□ -0.91
LTBR-202ENST00000440421 GAGE4Q13068 117 aa9.34□□□□□ -0.91
LTBR-202ENST00000440421 GAGE5Q13069 117 aa9.34□□□□□ -0.91
LTBR-202ENST00000440421 GAGE13Q4V321 117 aa9.34□□□□□ -0.91
LTBR-202ENST00000440421 CENPWQ5EE01 88 aa9.34□□□□□ -0.91
LTBR-202ENST00000440421 UFSP1Q6NVU6 142 aa9.34□□□□□ -0.91
LTBR-202ENST00000440421 ZFP82Q8N141 532 aa9.34□□□□□ -0.91
LTBR-202ENST00000440421 ATP6V0E2Q8NHE4 81 aa9.34□□□□□ -0.91
LTBR-202ENST00000440421 A0A1B0GVG6 124 aa9.33□□□□□ -0.92
LTBR-202ENST00000440421 RAB19A4D1S5 217 aa9.33□□□□□ -0.92
LTBR-202ENST00000440421 RHODO00212 210 aa9.33□□□□□ -0.92
LTBR-202ENST00000440421 DNAH10OSP0CZ25 163 aa9.33□□□□□ -0.92
LTBR-202ENST00000440421 BCL2P10415 239 aa9.33□□□□□ -0.92
LTBR-202ENST00000440421 BTF3P20290 206 aaKnown RBP9.33□□□□□ -0.92
LTBR-202ENST00000440421 EVI2AP22794 236 aa9.33□□□□□ -0.92
LTBR-202ENST00000440421 TIRAPP58753 221 aa9.33□□□□□ -0.92
LTBR-202ENST00000440421 OR10J3Q5JRS4 329 aa9.33□□□□□ -0.92
LTBR-202ENST00000440421 ALKAL2Q6UX46 152 aa9.33□□□□□ -0.92
LTBR-202ENST00000440421 C14orf178Q8N769 122 aaPredicted RBP9.33□□□□□ -0.92
LTBR-202ENST00000440421 SFRP2Q96HF1 295 aa9.33□□□□□ -0.92
LTBR-202ENST00000440421 Q9UF83 564 aa9.33□□□□□ -0.92
LTBR-202ENST00000440421 PKD1P98161 4303 aa9.33□□□□□ -0.92
LTBR-202ENST00000440421 MUC21A0A0G2JKD1 596 aa9.32□□□□□ -0.92
LTBR-202ENST00000440421 MUC21A0A140T8X8 626 aa9.32□□□□□ -0.92
LTBR-202ENST00000440421 Q6ZRN7 208 aaPredicted RBP9.32□□□□□ -0.92
LTBR-202ENST00000440421 OR10AG1Q8NH19 301 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 109.9 ms