RNA–Protein interactions for RNA: ENST00000439886.5

SMPD4-209, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 3,371 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-209ENST00000439886 SMCPP49901 116 aaPredicted RBP9.05□□□□□ -0.96
SMPD4-209ENST00000439886 HERVK_113P63121 156 aa9.05□□□□□ -0.96
SMPD4-209ENST00000439886 DEFB124Q8NES8 71 aa9.05□□□□□ -0.96
SMPD4-209ENST00000439886 F8VRH5 84 aa9.04□□□□□ -0.96
SMPD4-209ENST00000439886 IGHV4-39P01824 125 aa9.04□□□□□ -0.96
SMPD4-209ENST00000439886 THBDP07204 575 aa9.04□□□□□ -0.96
SMPD4-209ENST00000439886 RNASE6Q93091 150 aaKnown RBP9.04□□□□□ -0.96
SMPD4-209ENST00000439886 RASL10AQ92737 203 aa9.04□□□□□ -0.96
SMPD4-209ENST00000439886 RPL39LQ96EH5 51 aaKnown RBP9.04□□□□□ -0.96
SMPD4-209ENST00000439886 UCNP55089 124 aa9.04□□□□□ -0.96
SMPD4-209ENST00000439886 LINC00311Q8N616 119 aa9.04□□□□□ -0.96
SMPD4-209ENST00000439886 MBD3L2Q8NHZ7 208 aaPredicted RBP9.04□□□□□ -0.96
SMPD4-209ENST00000439886 PHLDA3Q9Y5J5 127 aa9.04□□□□□ -0.96
SMPD4-209ENST00000439886 LGALS1P09382 135 aaKnown RBP9.03□□□□□ -0.96
SMPD4-209ENST00000439886 DEFB1P60022 68 aa9.03□□□□□ -0.96
SMPD4-209ENST00000439886 SPENQ96T58 3664 aaKnown RBP9.03□□□□□ -0.96
SMPD4-209ENST00000439886 J3QLI3 93 aa9.03□□□□□ -0.96
SMPD4-209ENST00000439886 PDE6HQ13956 83 aa9.03□□□□□ -0.96
SMPD4-209ENST00000439886 CLEC19AQ6UXS0 136 aa9.03□□□□□ -0.96
SMPD4-209ENST00000439886 ANKRD29Q8N6D5 301 aa9.03□□□□□ -0.96
SMPD4-209ENST00000439886 HOXB4P17483 251 aaPredicted RBP9.03□□□□□ -0.96
SMPD4-209ENST00000439886 PSMG4Q5JS54 123 aa9.03□□□□□ -0.96
SMPD4-209ENST00000439886 LYRM7Q5U5X0 104 aa9.03□□□□□ -0.96
SMPD4-209ENST00000439886 GATD1Q8NB37 220 aa9.03□□□□□ -0.96
SMPD4-209ENST00000439886 C16orf92Q96LL3 132 aa9.03□□□□□ -0.96
SMPD4-209ENST00000439886 TLN1Q9Y490 2541 aaKnown RBP9.02□□□□□ -0.96
SMPD4-209ENST00000439886 PRSS2P07478 247 aa9.02□□□□□ -0.97
SMPD4-209ENST00000439886 C2orf66Q6UXQ4 117 aa9.02□□□□□ -0.97
SMPD4-209ENST00000439886 MORN3Q6PF18 240 aaPredicted RBP9.02□□□□□ -0.97
SMPD4-209ENST00000439886 LINC00477Q96M19 166 aa9.02□□□□□ -0.97
SMPD4-209ENST00000439886 AGPAT4-IT1Q9H0P7 198 aa9.02□□□□□ -0.97
SMPD4-209ENST00000439886 LINC00527Q9UJ94 153 aa9.02□□□□□ -0.97
SMPD4-209ENST00000439886 TRAV2A0A0B4J234 112 aa9.01□□□□□ -0.97
SMPD4-209ENST00000439886 IGKV3D-20A0A0C4DH25 116 aa9.01□□□□□ -0.97
SMPD4-209ENST00000439886 TAL2Q16559 108 aa9.01□□□□□ -0.97
SMPD4-209ENST00000439886 C4orf26Q17RF5 130 aa9.01□□□□□ -0.97
SMPD4-209ENST00000439886 LRRC75A-AS1Q8N1F1 130 aa9.01□□□□□ -0.97
SMPD4-209ENST00000439886 KIR2DL5BQ8NHK3 375 aa9.01□□□□□ -0.97
SMPD4-209ENST00000439886 DPM3Q9P2X0 92 aa9.01□□□□□ -0.97
SMPD4-209ENST00000439886 LRBAP50851 2863 aa9.01□□□□□ -0.97
SMPD4-209ENST00000439886 NACAE9PAV3 2078 aa9.01□□□□□ -0.97
SMPD4-209ENST00000439886 TRBV6-1A0A0K0K1D8 114 aa9.01□□□□□ -0.97
SMPD4-209ENST00000439886 HERVK_113P61574 105 aa9.01□□□□□ -0.97
SMPD4-209ENST00000439886 PAX8Q06710 450 aa9.01□□□□□ -0.97
SMPD4-209ENST00000439886 FAM74A4Q5TZK3 123 aa9.01□□□□□ -0.97
SMPD4-209ENST00000439886 MRAPQ8TCY5 172 aa9.01□□□□□ -0.97
SMPD4-209ENST00000439886 C11orf21Q9P2W6 132 aa9.01□□□□□ -0.97
SMPD4-209ENST00000439886 ANKRD11Q6UB99 2663 aaPredicted RBP9.01□□□□□ -0.97
SMPD4-209ENST00000439886 CDX4O14627 284 aaPredicted RBP9.01□□□□□ -0.97
SMPD4-209ENST00000439886 NDUFA7O95182 113 aa9.01□□□□□ -0.97
SMPD4-209ENST00000439886 LINC01587Q99440 93 aa9.01□□□□□ -0.97
SMPD4-209ENST00000439886 MAP1AP78559 2803 aaPredicted RBP9□□□□□ -0.97
SMPD4-209ENST00000439886 FAM236AA0A1B0GUQ0 79 aa9□□□□□ -0.97
SMPD4-209ENST00000439886 FAM236BA0A1B0GV22 79 aa9□□□□□ -0.97
SMPD4-209ENST00000439886 TCL1BO95988 128 aa9□□□□□ -0.97
SMPD4-209ENST00000439886 FOXC1Q12948 553 aa9□□□□□ -0.97
SMPD4-209ENST00000439886 SMIM2Q9BVW6 85 aa9□□□□□ -0.97
SMPD4-209ENST00000439886 ZMAT4Q9H898 229 aa9□□□□□ -0.97
SMPD4-209ENST00000439886 SPG11Q96JI7 2443 aa9□□□□□ -0.97
SMPD4-209ENST00000439886 TRBV7-3A0A075B6L6 115 aa9□□□□□ -0.97
SMPD4-209ENST00000439886 SHISA9B4DS77 424 aa9□□□□□ -0.97
SMPD4-209ENST00000439886 C15orf32Q32M92 178 aa9□□□□□ -0.97
SMPD4-209ENST00000439886 TRPT1Q86TN4 253 aaKnown RBP9□□□□□ -0.97
SMPD4-209ENST00000439886 C2CD3Q4AC94 2353 aa9□□□□□ -0.97
SMPD4-209ENST00000439886 CRYGBP07316 175 aa8.99□□□□□ -0.97
SMPD4-209ENST00000439886 NPC2P61916 151 aa8.99□□□□□ -0.97
SMPD4-209ENST00000439886 ZNF256Q9Y2P7 627 aaPredicted RBP8.99□□□□□ -0.97
SMPD4-209ENST00000439886 SMAD5-AS1Q9Y6J3 95 aa8.99□□□□□ -0.97
SMPD4-209ENST00000439886 MRPS12O15235 138 aaKnown RBP8.99□□□□□ -0.97
SMPD4-209ENST00000439886 IGLV1-47P01700 117 aa8.99□□□□□ -0.97
SMPD4-209ENST00000439886 SUMO2P61956 95 aaKnown RBP8.99□□□□□ -0.97
SMPD4-209ENST00000439886 IGF1P05019 195 aa8.99□□□□□ -0.97
SMPD4-209ENST00000439886 ASIPP42127 132 aa8.99□□□□□ -0.97
SMPD4-209ENST00000439886 PRR30Q53SZ7 412 aaPredicted RBP8.99□□□□□ -0.97
SMPD4-209ENST00000439886 OR11H6Q8NGC7 330 aa8.99□□□□□ -0.97
SMPD4-209ENST00000439886 LINC01560Q8TB33 94 aa8.99□□□□□ -0.97
SMPD4-209ENST00000439886 FANCD2OSQ96PS1 177 aa8.99□□□□□ -0.97
SMPD4-209ENST00000439886 DUX3Q96PT4 197 aa8.99□□□□□ -0.97
SMPD4-209ENST00000439886 TRAV8-4A0A0B4J246 113 aa8.98□□□□□ -0.97
SMPD4-209ENST00000439886 CD7P09564 240 aa8.98□□□□□ -0.97
SMPD4-209ENST00000439886 LGALS3P17931 250 aaKnown RBP8.98□□□□□ -0.97
SMPD4-209ENST00000439886 ORMDL2Q53FV1 153 aa8.98□□□□□ -0.97
SMPD4-209ENST00000439886 GAGE2AQ6NT46 116 aa8.98□□□□□ -0.97
SMPD4-209ENST00000439886 RPL35AP18077 110 aaKnown RBP8.98□□□□□ -0.97
SMPD4-209ENST00000439886 RNASE4P34096 147 aaKnown RBP8.98□□□□□ -0.97
SMPD4-209ENST00000439886 E7EQL1 145 aa8.98□□□□□ -0.97
SMPD4-209ENST00000439886 DUSP14O95147 198 aaKnown RBP8.98□□□□□ -0.97
SMPD4-209ENST00000439886 CTSGP08311 255 aa8.98□□□□□ -0.97
SMPD4-209ENST00000439886 ZNF56Q15929 161 aa8.98□□□□□ -0.97
SMPD4-209ENST00000439886 NTN5Q8WTR8 489 aaPredicted RBP8.98□□□□□ -0.97
SMPD4-209ENST00000439886 A0A0G2JNJ9 132 aa8.97□□□□□ -0.97
SMPD4-209ENST00000439886 FAM57AQ8TBR7 257 aa8.97□□□□□ -0.97
SMPD4-209ENST00000439886 MDFICQ9P1T7 246 aa8.97□□□□□ -0.97
SMPD4-209ENST00000439886 Q9UFV3 132 aa8.97□□□□□ -0.97
SMPD4-209ENST00000439886 SLC25A20O43772 301 aa8.97□□□□□ -0.97
SMPD4-209ENST00000439886 ZNF415Q09FC8 603 aa8.97□□□□□ -0.97
SMPD4-209ENST00000439886 ADARB2-AS1A8MUL3 147 aa8.96□□□□□ -0.97
SMPD4-209ENST00000439886 A0A087WWL8 130 aa8.96□□□□□ -0.97
SMPD4-209ENST00000439886 TINCRA0A1B0GVN0 87 aa8.96□□□□□ -0.97
SMPD4-209ENST00000439886 IGKV3-20P01619 116 aa8.96□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 97.2 ms