RNA–Protein interactions for RNA: ENST00000439088.1

LINC00163-202, long intergenic non-protein coding RNA 163, humanhuman

TSL 1 (best)

Gene LINC00163, Length 2,135 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00163-202ENST00000439088 KRTAP10-3P60369 221 aa11.11□□□□□ -0.63
LINC00163-202ENST00000439088 LAMTOR2Q9Y2Q5 125 aa11.11□□□□□ -0.63
LINC00163-202ENST00000439088 DEFA6Q01524 100 aa11.1□□□□□ -0.63
LINC00163-202ENST00000439088 SMKR1H3BMG3 65 aa11.09□□□□□ -0.63
LINC00163-202ENST00000439088 CD7P09564 240 aa11.09□□□□□ -0.63
LINC00163-202ENST00000439088 AGRNO00468 2067 aa11.09□□□□□ -0.63
LINC00163-202ENST00000439088 BAHCC1Q9P281 2608 aa11.09□□□□□ -0.63
LINC00163-202ENST00000439088 SORL1Q92673 2214 aa11.09□□□□□ -0.63
LINC00163-202ENST00000439088 IGHV1-24A0A0C4DH33 117 aa11.09□□□□□ -0.63
LINC00163-202ENST00000439088 M0R381 172 aa11.09□□□□□ -0.63
LINC00163-202ENST00000439088 NPYP01303 97 aa11.09□□□□□ -0.63
LINC00163-202ENST00000439088 IFI27P40305 119 aaPredicted RBP11.09□□□□□ -0.63
LINC00163-202ENST00000439088 KRTDAPP60985 99 aa11.09□□□□□ -0.63
LINC00163-202ENST00000439088 ZNF124Q15973 351 aa11.09□□□□□ -0.63
LINC00163-202ENST00000439088 FA2HQ7L5A8 372 aa11.09□□□□□ -0.63
LINC00163-202ENST00000439088 AP5S1Q9NUS5 200 aa11.09□□□□□ -0.63
LINC00163-202ENST00000439088 SETXQ7Z333 2677 aaKnown RBP11.08□□□□□ -0.63
LINC00163-202ENST00000439088 HIVEP1P15822 2718 aa11.08□□□□□ -0.64
LINC00163-202ENST00000439088 IGHV1OR15-1A0A075B7D0 117 aa11.08□□□□□ -0.64
LINC00163-202ENST00000439088 NXPH4O95158 308 aa11.08□□□□□ -0.64
LINC00163-202ENST00000439088 NCR2O95944 276 aa11.08□□□□□ -0.64
LINC00163-202ENST00000439088 CLUHP3Q96NS8 147 aa11.08□□□□□ -0.64
LINC00163-202ENST00000439088 LOC389332A0A1B0GUA5 103 aa11.08□□□□□ -0.64
LINC00163-202ENST00000439088 SPRY2O43597 315 aa11.08□□□□□ -0.64
LINC00163-202ENST00000439088 SAP30O75446 220 aa11.08□□□□□ -0.64
LINC00163-202ENST00000439088 PMCHL1Q16048 86 aa11.08□□□□□ -0.64
LINC00163-202ENST00000439088 IGHV3-16A0A0C4DH30 117 aa11.07□□□□□ -0.64
LINC00163-202ENST00000439088 RBMY1BA6NDE4 496 aaKnown RBP11.07□□□□□ -0.64
LINC00163-202ENST00000439088 RBMY1EA6NEQ0 496 aaKnown RBP11.07□□□□□ -0.64
LINC00163-202ENST00000439088 CRXO43186 299 aaPredicted RBP11.07□□□□□ -0.64
LINC00163-202ENST00000439088 RBMY1DP0C7P1 496 aaKnown RBP11.07□□□□□ -0.64
LINC00163-202ENST00000439088 C3orf79P0CE67 100 aa11.07□□□□□ -0.64
LINC00163-202ENST00000439088 CMC4P56277 68 aaPredicted RBP11.07□□□□□ -0.64
LINC00163-202ENST00000439088 ODF3L2Q3SX64 289 aa11.07□□□□□ -0.64
LINC00163-202ENST00000439088 GAS8-AS1O95177 125 aa11.06□□□□□ -0.64
LINC00163-202ENST00000439088 TNFRSF6BO95407 300 aa11.06□□□□□ -0.64
LINC00163-202ENST00000439088 FXYD7P58549 80 aa11.06□□□□□ -0.64
LINC00163-202ENST00000439088 Q8N1Y9 231 aa11.06□□□□□ -0.64
LINC00163-202ENST00000439088 MAP1LC3AQ9H492 121 aa11.06□□□□□ -0.64
LINC00163-202ENST00000439088 DPH3P1Q9H4G8 78 aa11.06□□□□□ -0.64
LINC00163-202ENST00000439088 IGLV1-51P01701 117 aa11.06□□□□□ -0.64
LINC00163-202ENST00000439088 OR2K2Q8NGT1 345 aa11.06□□□□□ -0.64
LINC00163-202ENST00000439088 MRAP2Q96G30 205 aa11.06□□□□□ -0.64
LINC00163-202ENST00000439088 C9orf85Q96MD7 179 aa11.06□□□□□ -0.64
LINC00163-202ENST00000439088 OR11H12B2RN74 326 aa11.05□□□□□ -0.64
LINC00163-202ENST00000439088 MDFICQ9P1T7 246 aa11.05□□□□□ -0.64
LINC00163-202ENST00000439088 LEPROTL1O95214 131 aa11.05□□□□□ -0.64
LINC00163-202ENST00000439088 PKIAP61925 76 aa11.05□□□□□ -0.64
LINC00163-202ENST00000439088 C14orf178Q8N769 122 aaPredicted RBP11.05□□□□□ -0.64
LINC00163-202ENST00000439088 Q8N976 141 aa11.05□□□□□ -0.64
LINC00163-202ENST00000439088 AP1S3Q96PC3 154 aa11.05□□□□□ -0.64
LINC00163-202ENST00000439088 TRGV11A0A075B6L2 103 aa11.04□□□□□ -0.64
LINC00163-202ENST00000439088 PRSS47A8MTI9 375 aa11.04□□□□□ -0.64
LINC00163-202ENST00000439088 RBMY1A1P0DJD3 496 aaKnown RBP11.04□□□□□ -0.64
LINC00163-202ENST00000439088 RBMY1CP0DJD4 496 aa11.04□□□□□ -0.64
LINC00163-202ENST00000439088 GATA1P15976 413 aaPredicted RBP11.04□□□□□ -0.64
LINC00163-202ENST00000439088 BTF3P20290 206 aaKnown RBP11.04□□□□□ -0.64
LINC00163-202ENST00000439088 RBMY1FQ15415 496 aaKnown RBP11.04□□□□□ -0.64
LINC00163-202ENST00000439088 DEFB125Q8N687 156 aa11.04□□□□□ -0.64
LINC00163-202ENST00000439088 NRACQ8N912 160 aa11.04□□□□□ -0.64
LINC00163-202ENST00000439088 C14orf144Q96I85 54 aa11.04□□□□□ -0.64
LINC00163-202ENST00000439088 LINC01546A6NGU7 62 aa11.03□□□□□ -0.64
LINC00163-202ENST00000439088 TSTD3H0UI37 97 aa11.03□□□□□ -0.64
LINC00163-202ENST00000439088 NXT2Q9NPJ8 142 aaKnown RBP11.03□□□□□ -0.64
LINC00163-202ENST00000439088 FN1P02751 2386 aaKnown RBP11.03□□□□□ -0.64
LINC00163-202ENST00000439088 WNK1Q9H4A3 2382 aa11.03□□□□□ -0.64
LINC00163-202ENST00000439088 TEX43Q6ZNM6 134 aa11.03□□□□□ -0.64
LINC00163-202ENST00000439088 STHQ8IWL8 128 aa11.03□□□□□ -0.64
LINC00163-202ENST00000439088 ZNF664Q8N3J9 261 aa11.03□□□□□ -0.64
LINC00163-202ENST00000439088 POM121L12Q8N7R1 296 aa11.03□□□□□ -0.64
LINC00163-202ENST00000439088 HSPB8Q9UJY1 196 aa11.03□□□□□ -0.64
LINC00163-202ENST00000439088 NSD1Q96L73 2696 aaPredicted RBP11.03□□□□□ -0.64
LINC00163-202ENST00000439088 MUC4Q99102 2169 aa11.02□□□□□ -0.64
LINC00163-202ENST00000439088 TRAV26-2A0A0B4J265 109 aa11.02□□□□□ -0.64
LINC00163-202ENST00000439088 PF4P02776 101 aa11.02□□□□□ -0.64
LINC00163-202ENST00000439088 DDTP30046 118 aa11.02□□□□□ -0.64
LINC00163-202ENST00000439088 SYT8Q8NBV8 401 aa11.02□□□□□ -0.64
LINC00163-202ENST00000439088 FAM110AQ9BQ89 295 aa11.02□□□□□ -0.64
LINC00163-202ENST00000439088 C20orf144Q9BQM9 153 aa11.02□□□□□ -0.64
LINC00163-202ENST00000439088 TMEM70Q9BUB7 260 aa11.02□□□□□ -0.64
LINC00163-202ENST00000439088 KIF25-AS1Q9Y6Z4 181 aa11.02□□□□□ -0.64
LINC00163-202ENST00000439088 CBY3A6NI87 242 aa11.02□□□□□ -0.65
LINC00163-202ENST00000439088 BEAN1Q3B7T3 259 aa11.02□□□□□ -0.65
LINC00163-202ENST00000439088 LINC00482Q8N8I6 264 aa11.02□□□□□ -0.65
LINC00163-202ENST00000439088 SETD2Q9BYW2 2564 aaPredicted RBP11.02□□□□□ -0.65
LINC00163-202ENST00000439088 SMIM17P0DL12 118 aa11.01□□□□□ -0.65
LINC00163-202ENST00000439088 LINC00173Q6ZV60 143 aa11.01□□□□□ -0.65
LINC00163-202ENST00000439088 TRPT1Q86TN4 253 aaKnown RBP11.01□□□□□ -0.65
LINC00163-202ENST00000439088 Q8N8P6 123 aa11.01□□□□□ -0.65
LINC00163-202ENST00000439088 LINC00467Q9BRT7 94 aa11.01□□□□□ -0.65
LINC00163-202ENST00000439088 PRO1933Q9H354 126 aa11.01□□□□□ -0.65
LINC00163-202ENST00000439088 LINC00315P59091 139 aa11□□□□□ -0.65
LINC00163-202ENST00000439088 IGLV2-18A0A075B6J9 118 aa11□□□□□ -0.65
LINC00163-202ENST00000439088 A0A096LNJ9 63 aa11□□□□□ -0.65
LINC00163-202ENST00000439088 INSP01308 110 aa11□□□□□ -0.65
LINC00163-202ENST00000439088 MGPP08493 103 aa11□□□□□ -0.65
LINC00163-202ENST00000439088 SYS1-DBNDD2H3BUS1 97 aa10.99□□□□□ -0.65
LINC00163-202ENST00000439088 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.99□□□□□ -0.65
LINC00163-202ENST00000439088 ZNF747Q9BV97 191 aa10.99□□□□□ -0.65
LINC00163-202ENST00000439088 MAP1LC3CQ9BXW4 147 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms