RNA–Protein interactions for RNA: ENST00000438862.6

CSTF3-203, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 1 (best) BASIC

Gene CSTF3, Length 1,132 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-203ENST00000438862 TMEM75Q8N9X5 138 aa7.59□□□□□ -1.19
CSTF3-203ENST00000438862 PCNPQ8WW12 178 aaKnown RBP7.59□□□□□ -1.19
CSTF3-203ENST00000438862 TIMM8BQ9Y5J9 83 aaPredicted RBP7.59□□□□□ -1.19
CSTF3-203ENST00000438862 LRP1Q07954 4544 aaKnown RBP7.59□□□□□ -1.19
CSTF3-203ENST00000438862 A0A0J9YY99 117 aa7.58□□□□□ -1.2
CSTF3-203ENST00000438862 F6UB75 175 aa7.58□□□□□ -1.2
CSTF3-203ENST00000438862 AZU1P20160 251 aa7.58□□□□□ -1.2
CSTF3-203ENST00000438862 TAS2R60P59551 318 aa7.58□□□□□ -1.2
CSTF3-203ENST00000438862 TOR2AQ5JU69 321 aa7.58□□□□□ -1.2
CSTF3-203ENST00000438862 TMEM78Q5T7P6 136 aa7.58□□□□□ -1.2
CSTF3-203ENST00000438862 AMTNQ6UX39 209 aa7.58□□□□□ -1.2
CSTF3-203ENST00000438862 SMIM12Q96EX1 92 aa7.58□□□□□ -1.2
CSTF3-203ENST00000438862 FMC1Q96HJ9 113 aa7.58□□□□□ -1.2
CSTF3-203ENST00000438862 ZFP30Q9Y2G7 519 aa7.58□□□□□ -1.2
CSTF3-203ENST00000438862 TNFRSF18Q9Y5U5 241 aa7.58□□□□□ -1.2
CSTF3-203ENST00000438862 TRAV9-2A0A087WT02 112 aa7.57□□□□□ -1.2
CSTF3-203ENST00000438862 IGLV5-52A0A0A0MRZ9 124 aa7.57□□□□□ -1.2
CSTF3-203ENST00000438862 PRAC2D3DTV9 90 aa7.57□□□□□ -1.2
CSTF3-203ENST00000438862 CRXO43186 299 aaPredicted RBP7.57□□□□□ -1.2
CSTF3-203ENST00000438862 CNN1P51911 297 aaKnown RBP7.57□□□□□ -1.2
CSTF3-203ENST00000438862 ZNF138P52744 262 aa7.57□□□□□ -1.2
CSTF3-203ENST00000438862 TMEM183BQ1AE95 376 aa7.57□□□□□ -1.2
CSTF3-203ENST00000438862 FAM74A3Q4VXF1 159 aa7.57□□□□□ -1.2
CSTF3-203ENST00000438862 SAPCD1Q5SSQ6 148 aa7.57□□□□□ -1.2
CSTF3-203ENST00000438862 ZNF493Q6ZR52 646 aa7.57□□□□□ -1.2
CSTF3-203ENST00000438862 GOLT1AQ6ZVE7 132 aa7.57□□□□□ -1.2
CSTF3-203ENST00000438862 NTN5Q8WTR8 489 aaPredicted RBP7.57□□□□□ -1.2
CSTF3-203ENST00000438862 C16orf74Q96GX8 76 aa7.57□□□□□ -1.2
CSTF3-203ENST00000438862 AGPAT4-IT1Q9H0P7 198 aa7.57□□□□□ -1.2
CSTF3-203ENST00000438862 ZNF492Q9P255 531 aa7.57□□□□□ -1.2
CSTF3-203ENST00000438862 SRP19P09132 144 aaKnown RBP7.56□□□□□ -1.2
CSTF3-203ENST00000438862 CRISP2P16562 243 aa7.56□□□□□ -1.2
CSTF3-203ENST00000438862 AKR1C3P42330 323 aa7.56□□□□□ -1.2
CSTF3-203ENST00000438862 FLI1Q01543 452 aaPredicted RBP7.56□□□□□ -1.2
CSTF3-203ENST00000438862 HIST1H1AQ02539 215 aaPredicted RBP7.56□□□□□ -1.2
CSTF3-203ENST00000438862 NDUFA5Q16718 116 aa7.56□□□□□ -1.2
CSTF3-203ENST00000438862 COX8CQ7Z4L0 72 aa7.56□□□□□ -1.2
CSTF3-203ENST00000438862 TMEM256Q8N2U0 113 aa7.56□□□□□ -1.2
CSTF3-203ENST00000438862 FAM19A4Q96LR4 140 aa7.56□□□□□ -1.2
CSTF3-203ENST00000438862 LINC01587Q99440 93 aa7.56□□□□□ -1.2
CSTF3-203ENST00000438862 IGLV2-11P01706 119 aa7.55□□□□□ -1.2
CSTF3-203ENST00000438862 UBE2G1P62253 170 aa7.55□□□□□ -1.2
CSTF3-203ENST00000438862 GNG5P63218 68 aa7.55□□□□□ -1.2
CSTF3-203ENST00000438862 SPINK13Q1W4C9 94 aa7.55□□□□□ -1.2
CSTF3-203ENST00000438862 VGLL1Q99990 258 aa7.55□□□□□ -1.2
CSTF3-203ENST00000438862 NDFIP1Q9BT67 221 aa7.55□□□□□ -1.2
CSTF3-203ENST00000438862 NOP10Q9NPE3 64 aaKnown RBP7.55□□□□□ -1.2
CSTF3-203ENST00000438862 PSG8Q9UQ74 426 aa7.55□□□□□ -1.2
CSTF3-203ENST00000438862 IGKV2-40A0A087WW87 121 aaPredicted RBP7.54□□□□□ -1.2
CSTF3-203ENST00000438862 C9JCJ5 164 aa7.54□□□□□ -1.2
CSTF3-203ENST00000438862 K7EP13 123 aa7.54□□□□□ -1.2
CSTF3-203ENST00000438862 M0R2Z0 102 aa7.54□□□□□ -1.2
CSTF3-203ENST00000438862 LTAP01374 205 aa7.54□□□□□ -1.2
CSTF3-203ENST00000438862 IGKV2D-40P01614 121 aaPredicted RBP7.54□□□□□ -1.2
CSTF3-203ENST00000438862 CT45A10P0DMU9 189 aa7.54□□□□□ -1.2
CSTF3-203ENST00000438862 LEPP41159 167 aa7.54□□□□□ -1.2
CSTF3-203ENST00000438862 RPL35P42766 123 aaKnown RBP7.54□□□□□ -1.2
CSTF3-203ENST00000438862 CDKN1BP46527 198 aa7.54□□□□□ -1.2
CSTF3-203ENST00000438862 LINC00612Q8N6U2 182 aa7.54□□□□□ -1.2
CSTF3-203ENST00000438862 C20orf144Q9BQM9 153 aa7.54□□□□□ -1.2
CSTF3-203ENST00000438862 FAM30AQ9NZY2 134 aa7.54□□□□□ -1.2
CSTF3-203ENST00000438862 RPH3ALQ9UNE2 315 aa7.54□□□□□ -1.2
CSTF3-203ENST00000438862 LY96Q9Y6Y9 160 aa7.54□□□□□ -1.2
CSTF3-203ENST00000438862 A0A096LPF7 62 aa7.53□□□□□ -1.2
CSTF3-203ENST00000438862 KLLNB2CW77 178 aa7.53□□□□□ -1.2
CSTF3-203ENST00000438862 NXPH4O95158 308 aa7.53□□□□□ -1.2
CSTF3-203ENST00000438862 SRSF3P84103 164 aaKnown RBP7.53□□□□□ -1.2
CSTF3-203ENST00000438862 ERCC8Q13216 396 aa7.53□□□□□ -1.2
CSTF3-203ENST00000438862 COMMD7Q86VX2 200 aa7.53□□□□□ -1.2
CSTF3-203ENST00000438862 BAGE2Q86Y30 109 aa7.53□□□□□ -1.2
CSTF3-203ENST00000438862 TMEM183AQ8IXX5 376 aa7.53□□□□□ -1.2
CSTF3-203ENST00000438862 LINC00479Q96M42 142 aa7.53□□□□□ -1.2
CSTF3-203ENST00000438862 MLST8Q9BVC4 326 aa7.53□□□□□ -1.2
CSTF3-203ENST00000438862 PARLQ9H300 379 aa7.53□□□□□ -1.2
CSTF3-203ENST00000438862 TREM1Q9NP99 234 aa7.53□□□□□ -1.2
CSTF3-203ENST00000438862 BIN3Q9NQY0 253 aa7.53□□□□□ -1.2
CSTF3-203ENST00000438862 FAT3Q8TDW7 4589 aa7.53□□□□□ -1.2
CSTF3-203ENST00000438862 TRAV8-1A0A0A6YYK1 113 aa7.52□□□□□ -1.21
CSTF3-203ENST00000438862 HTN1P15515 57 aa7.52□□□□□ -1.21
CSTF3-203ENST00000438862 PRNTQ86SH4 94 aa7.52□□□□□ -1.21
CSTF3-203ENST00000438862 Q86TA4 180 aa7.52□□□□□ -1.21
CSTF3-203ENST00000438862 ZFAND2AQ8N6M9 145 aa7.52□□□□□ -1.21
CSTF3-203ENST00000438862 TMEM263Q8WUH6 116 aaKnown RBP7.52□□□□□ -1.21
CSTF3-203ENST00000438862 MSRB1Q9NZV6 116 aa7.52□□□□□ -1.21
CSTF3-203ENST00000438862 RNF213Q63HN8 5207 aa7.51□□□□□ -1.21
CSTF3-203ENST00000438862 DNAH8Q96JB1 4490 aa7.51□□□□□ -1.21
CSTF3-203ENST00000438862 TRAV12-2A0A075B6T6 113 aa7.51□□□□□ -1.21
CSTF3-203ENST00000438862 TRAV34A0A0B4J273 112 aa7.51□□□□□ -1.21
CSTF3-203ENST00000438862 TMEM218A2RU14 115 aa7.51□□□□□ -1.21
CSTF3-203ENST00000438862 ZNF727A8MUV8 499 aa7.51□□□□□ -1.21
CSTF3-203ENST00000438862 C9JQL5 133 aa7.51□□□□□ -1.21
CSTF3-203ENST00000438862 GPX1P07203 203 aa7.51□□□□□ -1.21
CSTF3-203ENST00000438862 GNG4P50150 75 aa7.51□□□□□ -1.21
CSTF3-203ENST00000438862 SMUG1Q53HV7 270 aa7.51□□□□□ -1.21
CSTF3-203ENST00000438862 Q6AWC8 147 aa7.51□□□□□ -1.21
CSTF3-203ENST00000438862 RNASE8Q8TDE3 154 aaKnown RBP7.51□□□□□ -1.21
CSTF3-203ENST00000438862 TVP23CQ96ET8 276 aa7.51□□□□□ -1.21
CSTF3-203ENST00000438862 SMIM7Q9BQ49 75 aa7.51□□□□□ -1.21
CSTF3-203ENST00000438862 TRBV20OR9-2A0A075B6H5 130 aa7.5□□□□□ -1.21
CSTF3-203ENST00000438862 FABP5P3A8MUU1 101 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms