RNA–Protein interactions for RNA: ENST00000438647.3

RAPGEF1-206, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene RAPGEF1, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-206ENST00000438647 TRAV1-1A0A0B4J248 108 aa17.06■□□□□ 0.32
RAPGEF1-206ENST00000438647 SRIP30626 198 aa17.06■□□□□ 0.32
RAPGEF1-206ENST00000438647 K7EQD1 137 aa17.05■□□□□ 0.32
RAPGEF1-206ENST00000438647 SH2D1AO60880 128 aa17.05■□□□□ 0.32
RAPGEF1-206ENST00000438647 GYPEP15421 78 aa17.05■□□□□ 0.32
RAPGEF1-206ENST00000438647 SULT1A2P50226 295 aa17.05■□□□□ 0.32
RAPGEF1-206ENST00000438647 CRIP1P50238 77 aa17.05■□□□□ 0.32
RAPGEF1-206ENST00000438647 SCO2A0A1W2PP80 73 aa17.04■□□□□ 0.32
RAPGEF1-206ENST00000438647 RS1O15537 224 aa17.04■□□□□ 0.32
RAPGEF1-206ENST00000438647 ZNF674Q2M3X9 581 aa17.04■□□□□ 0.32
RAPGEF1-206ENST00000438647 ZNF506Q5JVG8 444 aa17.04■□□□□ 0.32
RAPGEF1-206ENST00000438647 PIK3CD-AS1Q5SR53 167 aa17.04■□□□□ 0.32
RAPGEF1-206ENST00000438647 CFAP126Q5VTH2 177 aa17.04■□□□□ 0.32
RAPGEF1-206ENST00000438647 C6orf223Q8N319 242 aa17.04■□□□□ 0.32
RAPGEF1-206ENST00000438647 TXNDC17Q9BRA2 123 aa17.04■□□□□ 0.32
RAPGEF1-206ENST00000438647 IL36BQ9NZH7 164 aa17.04■□□□□ 0.32
RAPGEF1-206ENST00000438647 A0A1W2PPQ1 181 aa17.03■□□□□ 0.32
RAPGEF1-206ENST00000438647 PGPEP1LA6NFU8 196 aa17.03■□□□□ 0.32
RAPGEF1-206ENST00000438647 GATA1P15976 413 aaPredicted RBP17.03■□□□□ 0.32
RAPGEF1-206ENST00000438647 GNG13Q9P2W3 67 aa17.03■□□□□ 0.32
RAPGEF1-206ENST00000438647 KRBOX1C9JBD0 128 aa17.02■□□□□ 0.32
RAPGEF1-206ENST00000438647 M0R036 132 aa17.02■□□□□ 0.32
RAPGEF1-206ENST00000438647 SH2D6Q7Z4S9 175 aa17.02■□□□□ 0.32
RAPGEF1-206ENST00000438647 DNLZQ5SXM8 178 aa17.01■□□□□ 0.31
RAPGEF1-206ENST00000438647 LYPD5Q6UWN5 251 aa17.01■□□□□ 0.31
RAPGEF1-206ENST00000438647 A8MWV9 139 aa17■□□□□ 0.31
RAPGEF1-206ENST00000438647 SIVA1O15304 175 aa17■□□□□ 0.31
RAPGEF1-206ENST00000438647 NXPH4O95158 308 aa17■□□□□ 0.31
RAPGEF1-206ENST00000438647 CCL20P78556 96 aa17■□□□□ 0.31
RAPGEF1-206ENST00000438647 LINC01559Q495D7 138 aa17■□□□□ 0.31
RAPGEF1-206ENST00000438647 BAGE2Q86Y30 109 aa17■□□□□ 0.31
RAPGEF1-206ENST00000438647 A0A1B0GVY2 172 aa16.99■□□□□ 0.31
RAPGEF1-206ENST00000438647 H3BVH4 76 aa16.99■□□□□ 0.31
RAPGEF1-206ENST00000438647 RHOHQ15669 191 aa16.99■□□□□ 0.31
RAPGEF1-206ENST00000438647 C9orf62Q8N4C0 152 aa16.99■□□□□ 0.31
RAPGEF1-206ENST00000438647 NHLRC2Q8NBF2 726 aa16.99■□□□□ 0.31
RAPGEF1-206ENST00000438647 SYT8Q8NBV8 401 aa16.99■□□□□ 0.31
RAPGEF1-206ENST00000438647 PRADC1Q9BSG0 188 aa16.99■□□□□ 0.31
RAPGEF1-206ENST00000438647 TRBV6-4A0A1B0GX49 114 aa16.98■□□□□ 0.31
RAPGEF1-206ENST00000438647 IFNA1P01562 189 aa16.98■□□□□ 0.31
RAPGEF1-206ENST00000438647 MGST1P10620 155 aaKnown RBP16.98■□□□□ 0.31
RAPGEF1-206ENST00000438647 BTF3P20290 206 aaKnown RBP16.98■□□□□ 0.31
RAPGEF1-206ENST00000438647 SLC25A29Q8N8R3 303 aa16.98■□□□□ 0.31
RAPGEF1-206ENST00000438647 ARMS2P0C7Q2 107 aa16.97■□□□□ 0.31
RAPGEF1-206ENST00000438647 ZFP2Q6ZN57 461 aa16.97■□□□□ 0.31
RAPGEF1-206ENST00000438647 C11orf52Q96A22 123 aa16.97■□□□□ 0.31
RAPGEF1-206ENST00000438647 MLST8Q9BVC4 326 aa16.97■□□□□ 0.31
RAPGEF1-206ENST00000438647 IGHV3-73A0A0B4J1V6 119 aa16.96■□□□□ 0.31
RAPGEF1-206ENST00000438647 GRIFINA4D1Z8 144 aa16.96■□□□□ 0.31
RAPGEF1-206ENST00000438647 RPL35P42766 123 aaKnown RBP16.96■□□□□ 0.31
RAPGEF1-206ENST00000438647 KRTAP1-5Q9BYS1 174 aa16.96■□□□□ 0.31
RAPGEF1-206ENST00000438647 PHLDA3Q9Y5J5 127 aa16.96■□□□□ 0.31
RAPGEF1-206ENST00000438647 TMSB15BA0A087X1C1 80 aa16.95■□□□□ 0.3
RAPGEF1-206ENST00000438647 LOC100131303A0A0U1RQF7 123 aa16.95■□□□□ 0.3
RAPGEF1-206ENST00000438647 PARLQ9H300 379 aa16.95■□□□□ 0.3
RAPGEF1-206ENST00000438647 PKHD1P08F94 4074 aa16.95■□□□□ 0.3
RAPGEF1-206ENST00000438647 MEF2BQ02080 365 aaPredicted RBP16.94■□□□□ 0.3
RAPGEF1-206ENST00000438647 PKD1P98161 4303 aa16.94■□□□□ 0.3
RAPGEF1-206ENST00000438647 PDE6DO43924 150 aa16.93■□□□□ 0.3
RAPGEF1-206ENST00000438647 DMRTA1Q5VZB9 504 aa16.93■□□□□ 0.3
RAPGEF1-206ENST00000438647 SCRT2Q9NQ03 307 aa16.93■□□□□ 0.3
RAPGEF1-206ENST00000438647 RHODO00212 210 aa16.92■□□□□ 0.3
RAPGEF1-206ENST00000438647 CXCL1P09341 107 aa16.92■□□□□ 0.3
RAPGEF1-206ENST00000438647 TAGLN2P37802 199 aaKnown RBP16.92■□□□□ 0.3
RAPGEF1-206ENST00000438647 TIRAPP58753 221 aa16.92■□□□□ 0.3
RAPGEF1-206ENST00000438647 TRAV9-2A0A087WT02 112 aa16.91■□□□□ 0.3
RAPGEF1-206ENST00000438647 MED14OSP0DP75 135 aa16.91■□□□□ 0.3
RAPGEF1-206ENST00000438647 BCL2P10415 239 aa16.91■□□□□ 0.3
RAPGEF1-206ENST00000438647 PRR27Q6MZM9 219 aa16.91■□□□□ 0.3
RAPGEF1-206ENST00000438647 ZFP82Q8N141 532 aa16.91■□□□□ 0.3
RAPGEF1-206ENST00000438647 DERL1Q9BUN8 251 aa16.91■□□□□ 0.3
RAPGEF1-206ENST00000438647 LY96Q9Y6Y9 160 aa16.91■□□□□ 0.3
RAPGEF1-206ENST00000438647 K7EP13 123 aa16.9■□□□□ 0.3
RAPGEF1-206ENST00000438647 TNP2Q05952 138 aa16.9■□□□□ 0.3
RAPGEF1-206ENST00000438647 ZNF575Q86XF7 245 aa16.9■□□□□ 0.3
RAPGEF1-206ENST00000438647 VAX2Q9UIW0 290 aa16.9■□□□□ 0.3
RAPGEF1-206ENST00000438647 M0R381 172 aa16.89■□□□□ 0.29
RAPGEF1-206ENST00000438647 CENPWQ5EE01 88 aa16.89■□□□□ 0.29
RAPGEF1-206ENST00000438647 SMIM12Q96EX1 92 aa16.89■□□□□ 0.29
RAPGEF1-206ENST00000438647 BOLA1Q9Y3E2 137 aa16.89■□□□□ 0.29
RAPGEF1-206ENST00000438647 JPT2Q9H910 190 aa16.88■□□□□ 0.29
RAPGEF1-206ENST00000438647 DNAH11Q96DT5 4516 aa16.87■□□□□ 0.29
RAPGEF1-206ENST00000438647 EVI2AP22794 236 aa16.87■□□□□ 0.29
RAPGEF1-206ENST00000438647 GNG4P50150 75 aa16.87■□□□□ 0.29
RAPGEF1-206ENST00000438647 LINC00315P59091 139 aa16.87■□□□□ 0.29
RAPGEF1-206ENST00000438647 RPL19P84098 196 aaKnown RBP16.87■□□□□ 0.29
RAPGEF1-206ENST00000438647 UFSP1Q6NVU6 142 aa16.87■□□□□ 0.29
RAPGEF1-206ENST00000438647 ALKAL2Q6UX46 152 aa16.87■□□□□ 0.29
RAPGEF1-206ENST00000438647 WFDC10BQ8IUB3 73 aa16.87■□□□□ 0.29
RAPGEF1-206ENST00000438647 SFRP2Q96HF1 295 aa16.87■□□□□ 0.29
RAPGEF1-206ENST00000438647 SAMD10Q9BYL1 202 aa16.87■□□□□ 0.29
RAPGEF1-206ENST00000438647 MED9Q9NWA0 146 aa16.87■□□□□ 0.29
RAPGEF1-206ENST00000438647 DNAH10OSP0CZ25 163 aa16.86■□□□□ 0.29
RAPGEF1-206ENST00000438647 BLOC1S1P78537 153 aa16.86■□□□□ 0.29
RAPGEF1-206ENST00000438647 FAM74A4Q5TZK3 123 aa16.86■□□□□ 0.29
RAPGEF1-206ENST00000438647 DYNC1H1Q14204 4646 aaKnown RBP16.85■□□□□ 0.29
RAPGEF1-206ENST00000438647 Q6ZSN1 163 aa16.85■□□□□ 0.29
RAPGEF1-206ENST00000438647 ATP6V0E2Q8NHE4 81 aa16.85■□□□□ 0.29
RAPGEF1-206ENST00000438647 DAZAP1Q96EP5 407 aaKnown RBP16.85■□□□□ 0.29
RAPGEF1-206ENST00000438647 TRAV8-6A0A0B4J262 113 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms