RNA–Protein interactions for RNA: ENST00000438594.2

HMGB1P12-201, Transcript of high mobility group box 1 pseudogene 12, humanhuman

BASIC

Gene HMGB1P12, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P12-201ENST00000438594 C12orf73Q69YU5 71 aa2.31□□□□□ -2.04
HMGB1P12-201ENST00000438594 Q6ZQT7 251 aa2.31□□□□□ -2.04
HMGB1P12-201ENST00000438594 RPRMLQ8N4K4 120 aa2.31□□□□□ -2.04
HMGB1P12-201ENST00000438594 MAPK1IP1LQ8NDC0 245 aa2.31□□□□□ -2.04
HMGB1P12-201ENST00000438594 S100ZQ8WXG8 99 aa2.31□□□□□ -2.04
HMGB1P12-201ENST00000438594 S100A16Q96FQ6 103 aaKnown RBP2.31□□□□□ -2.04
HMGB1P12-201ENST00000438594 SLC50A1Q9BRV3 221 aa2.31□□□□□ -2.04
HMGB1P12-201ENST00000438594 FAM215AQ9Y5M1 114 aa2.31□□□□□ -2.04
HMGB1P12-201ENST00000438594 SHANK3Q9BYB0 1731 aa2.31□□□□□ -2.04
HMGB1P12-201ENST00000438594 SCN8AQ9UQD0 1980 aa2.3□□□□□ -2.04
HMGB1P12-201ENST00000438594 A0A096LNJ9 63 aa2.3□□□□□ -2.04
HMGB1P12-201ENST00000438594 ZNF705FA8MVS1 300 aaPredicted RBP2.3□□□□□ -2.04
HMGB1P12-201ENST00000438594 IBA57-AS1B1ANH7 110 aa2.3□□□□□ -2.04
HMGB1P12-201ENST00000438594 H3BPC8 53 aa2.3□□□□□ -2.04
HMGB1P12-201ENST00000438594 IGKCP01834 107 aa2.3□□□□□ -2.04
HMGB1P12-201ENST00000438594 HINT1P49773 126 aaPredicted RBP2.3□□□□□ -2.04
HMGB1P12-201ENST00000438594 FXYD2P54710 66 aa2.3□□□□□ -2.04
HMGB1P12-201ENST00000438594 ATP5EP56381 51 aaPredicted RBP2.3□□□□□ -2.04
HMGB1P12-201ENST00000438594 DSCR10P59022 87 aa2.3□□□□□ -2.04
HMGB1P12-201ENST00000438594 ZNF117Q03924 483 aa2.3□□□□□ -2.04
HMGB1P12-201ENST00000438594 HIGD2BQ4VC39 106 aa2.3□□□□□ -2.04
HMGB1P12-201ENST00000438594 C1orf134Q5TEV5 83 aa2.3□□□□□ -2.04
HMGB1P12-201ENST00000438594 C15orf53Q8NAA6 179 aa2.3□□□□□ -2.04
HMGB1P12-201ENST00000438594 IMMP1LQ96LU5 166 aa2.3□□□□□ -2.04
HMGB1P12-201ENST00000438594 Q96M85 177 aa2.3□□□□□ -2.04
HMGB1P12-201ENST00000438594 NHP2Q9NX24 153 aaKnown RBP2.3□□□□□ -2.04
HMGB1P12-201ENST00000438594 LTBP1Q14766 1721 aa2.3□□□□□ -2.04
HMGB1P12-201ENST00000438594 STRCP1A6NGW2 1772 aa2.3□□□□□ -2.04
HMGB1P12-201ENST00000438594 PARP14Q460N5 1801 aa2.3□□□□□ -2.04
HMGB1P12-201ENST00000438594 BRWD3Q6RI45 1802 aa2.3□□□□□ -2.04
HMGB1P12-201ENST00000438594 MCM3APO60318 1980 aa2.3□□□□□ -2.04
HMGB1P12-201ENST00000438594 CHD3Q12873 2000 aaKnown RBP2.29□□□□□ -2.04
HMGB1P12-201ENST00000438594 TNRC6AQ8NDV7 1962 aaKnown RBP2.29□□□□□ -2.04
HMGB1P12-201ENST00000438594 TANC2Q9HCD6 1990 aa2.29□□□□□ -2.04
HMGB1P12-201ENST00000438594 MYO5AQ9Y4I1 1855 aaKnown RBP2.29□□□□□ -2.04
HMGB1P12-201ENST00000438594 LAMB4A4D0S4 1761 aa2.29□□□□□ -2.04
HMGB1P12-201ENST00000438594 LTN1O94822 1766 aa2.29□□□□□ -2.04
HMGB1P12-201ENST00000438594 DDX60Q8IY21 1712 aaKnown RBP2.29□□□□□ -2.04
HMGB1P12-201ENST00000438594 C5P01031 1676 aa2.29□□□□□ -2.04
HMGB1P12-201ENST00000438594 LRP5O75197 1615 aa2.29□□□□□ -2.04
HMGB1P12-201ENST00000438594 LOC107984156A0A0G2JMH3 177 aa2.29□□□□□ -2.04
HMGB1P12-201ENST00000438594 TMEM235A6NFC5 223 aa2.29□□□□□ -2.04
HMGB1P12-201ENST00000438594 C17orf112F2Z3M2 114 aa2.29□□□□□ -2.04
HMGB1P12-201ENST00000438594 H7C2G1 150 aa2.29□□□□□ -2.04
HMGB1P12-201ENST00000438594 NUPR1O60356 82 aa2.29□□□□□ -2.04
HMGB1P12-201ENST00000438594 CCKP06307 115 aa2.29□□□□□ -2.04
HMGB1P12-201ENST00000438594 POLR2JP52435 117 aaKnown RBP2.29□□□□□ -2.04
HMGB1P12-201ENST00000438594 IGLV3-21P80748 117 aaPredicted RBP2.29□□□□□ -2.04
HMGB1P12-201ENST00000438594 NNATQ16517 81 aa2.29□□□□□ -2.04
HMGB1P12-201ENST00000438594 UBE2SQ16763 222 aa2.29□□□□□ -2.04
HMGB1P12-201ENST00000438594 Q6ZR54 194 aa2.29□□□□□ -2.04
HMGB1P12-201ENST00000438594 ARL17AQ8IVW1 177 aa2.29□□□□□ -2.04
HMGB1P12-201ENST00000438594 AMELYQ99218 206 aa2.29□□□□□ -2.04
HMGB1P12-201ENST00000438594 TIMM9Q9Y5J7 89 aa2.29□□□□□ -2.04
HMGB1P12-201ENST00000438594 ARID1AO14497 2285 aa2.29□□□□□ -2.04
HMGB1P12-201ENST00000438594 PTPRBP23467 1997 aa2.29□□□□□ -2.04
HMGB1P12-201ENST00000438594 MAP2P11137 1827 aaKnown RBP2.28□□□□□ -2.04
HMGB1P12-201ENST00000438594 SBF2Q86WG5 1849 aa2.28□□□□□ -2.04
HMGB1P12-201ENST00000438594 NHSL1Q5SYE7 1610 aa2.28□□□□□ -2.04
HMGB1P12-201ENST00000438594 PLIN4Q96Q06 1357 aa2.28□□□□□ -2.04
HMGB1P12-201ENST00000438594 IGKV1D-17A0A075B6S4 117 aa2.28□□□□□ -2.04
HMGB1P12-201ENST00000438594 H3BRM9 83 aa2.28□□□□□ -2.04
HMGB1P12-201ENST00000438594 M0R233 179 aa2.28□□□□□ -2.04
HMGB1P12-201ENST00000438594 IGHV3-53P01767 116 aa2.28□□□□□ -2.04
HMGB1P12-201ENST00000438594 IGLC2P0DOY2 106 aa2.28□□□□□ -2.04
HMGB1P12-201ENST00000438594 IGLC3P0DOY3 106 aa2.28□□□□□ -2.04
HMGB1P12-201ENST00000438594 PIPP12273 146 aaPredicted RBP2.28□□□□□ -2.04
HMGB1P12-201ENST00000438594 RBM3P98179 157 aaKnown RBP2.28□□□□□ -2.04
HMGB1P12-201ENST00000438594 EIF4EBP1Q13541 118 aaPredicted RBP2.28□□□□□ -2.04
HMGB1P12-201ENST00000438594 ADIRFQ15847 76 aa2.28□□□□□ -2.04
HMGB1P12-201ENST00000438594 DEFB116Q30KQ4 102 aa2.28□□□□□ -2.04
HMGB1P12-201ENST00000438594 C15orf32Q32M92 178 aa2.28□□□□□ -2.04
HMGB1P12-201ENST00000438594 SLC25A26Q70HW3 274 aa2.28□□□□□ -2.04
HMGB1P12-201ENST00000438594 COMMD6Q7Z4G1 85 aa2.28□□□□□ -2.04
HMGB1P12-201ENST00000438594 LINC00269Q8N2A0 174 aa2.28□□□□□ -2.04
HMGB1P12-201ENST00000438594 CYB561D1Q8N8Q1 229 aa2.28□□□□□ -2.04
HMGB1P12-201ENST00000438594 CXCL16Q9H2A7 254 aa2.28□□□□□ -2.04
HMGB1P12-201ENST00000438594 ST20Q9HBF5 79 aa2.28□□□□□ -2.04
HMGB1P12-201ENST00000438594 ZFC3H1O60293 1989 aaKnown RBP2.28□□□□□ -2.04
HMGB1P12-201ENST00000438594 RGPD8O14715 1765 aaPredicted RBP2.28□□□□□ -2.04
HMGB1P12-201ENST00000438594 RREB1Q92766 1687 aa2.28□□□□□ -2.05
HMGB1P12-201ENST00000438594 LRP6O75581 1613 aa2.28□□□□□ -2.05
HMGB1P12-201ENST00000438594 LTBP4Q8N2S1 1624 aa2.28□□□□□ -2.05
HMGB1P12-201ENST00000438594 IGKV1D-42A0A075B6H8 117 aa2.27□□□□□ -2.05
HMGB1P12-201ENST00000438594 TRBV6-6A0A0A6YYG2 114 aa2.27□□□□□ -2.05
HMGB1P12-201ENST00000438594 A0A0J9YWU9 116 aa2.27□□□□□ -2.05
HMGB1P12-201ENST00000438594 C11orf86A6NJI1 115 aa2.27□□□□□ -2.05
HMGB1P12-201ENST00000438594 C5orf67F2Z3F1 127 aa2.27□□□□□ -2.05
HMGB1P12-201ENST00000438594 CFDP00746 253 aaPredicted RBP2.27□□□□□ -2.05
HMGB1P12-201ENST00000438594 CRPP02741 224 aa2.27□□□□□ -2.05
HMGB1P12-201ENST00000438594 IGLV7-43P04211 117 aa2.27□□□□□ -2.05
HMGB1P12-201ENST00000438594 FAUP35544 74 aaKnown RBP2.27□□□□□ -2.05
HMGB1P12-201ENST00000438594 SEC11AP67812 179 aa2.27□□□□□ -2.05
HMGB1P12-201ENST00000438594 S100A7L2Q5SY68 101 aa2.27□□□□□ -2.05
HMGB1P12-201ENST00000438594 SPINK14Q6IE38 97 aa2.27□□□□□ -2.05
HMGB1P12-201ENST00000438594 Q8NAQ8 132 aa2.27□□□□□ -2.05
HMGB1P12-201ENST00000438594 FAM213BQ8TBF2 198 aa2.27□□□□□ -2.05
HMGB1P12-201ENST00000438594 MYOZ3Q8TDC0 251 aa2.27□□□□□ -2.05
HMGB1P12-201ENST00000438594 ZNF431Q8TF32 576 aaPredicted RBP2.27□□□□□ -2.05
HMGB1P12-201ENST00000438594 SMIM7Q9BQ49 75 aa2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms