RNA–Protein interactions for RNA: ENST00000432057.2

VRK2-205, Transcript of vaccinia related kinase 2, humanhuman

TSL 1 (best)

Gene VRK2, Length 1,870 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-205ENST00000432057 VAMP8Q9BV40 100 aa14.53□□□□□ -0.08
VRK2-205ENST00000432057 HIVEP2P31629 2446 aa14.53□□□□□ -0.08
VRK2-205ENST00000432057 CCL24O00175 119 aa14.52□□□□□ -0.08
VRK2-205ENST00000432057 TCF21O43680 179 aa14.52□□□□□ -0.08
VRK2-205ENST00000432057 DEFB114Q30KQ6 69 aa14.52□□□□□ -0.08
VRK2-205ENST00000432057 PAM16Q9Y3D7 125 aa14.52□□□□□ -0.08
VRK2-205ENST00000432057 TSSC4Q9Y5U2 329 aaPredicted RBP14.52□□□□□ -0.08
VRK2-205ENST00000432057 SETD2Q9BYW2 2564 aaPredicted RBP14.52□□□□□ -0.08
VRK2-205ENST00000432057 TRAV2A0A0B4J234 112 aa14.52□□□□□ -0.09
VRK2-205ENST00000432057 TNFRSF6BO95407 300 aa14.52□□□□□ -0.09
VRK2-205ENST00000432057 CDKN1BP46527 198 aa14.52□□□□□ -0.09
VRK2-205ENST00000432057 AMTNQ6UX39 209 aa14.52□□□□□ -0.09
VRK2-205ENST00000432057 TMEM70Q9BUB7 260 aa14.52□□□□□ -0.09
VRK2-205ENST00000432057 MAP1LC3AQ9H492 121 aa14.52□□□□□ -0.09
VRK2-205ENST00000432057 TRAV26-2A0A0B4J265 109 aa14.51□□□□□ -0.09
VRK2-205ENST00000432057 ZNF124Q15973 351 aa14.51□□□□□ -0.09
VRK2-205ENST00000432057 CD300EQ496F6 205 aaPredicted RBP14.51□□□□□ -0.09
VRK2-205ENST00000432057 A0A096LNJ9 63 aa14.5□□□□□ -0.09
VRK2-205ENST00000432057 TSPOP30536 169 aa14.5□□□□□ -0.09
VRK2-205ENST00000432057 LAMTOR2Q9Y2Q5 125 aa14.5□□□□□ -0.09
VRK2-205ENST00000432057 CD7P09564 240 aa14.5□□□□□ -0.09
VRK2-205ENST00000432057 ATOH7Q8N100 152 aa14.5□□□□□ -0.09
VRK2-205ENST00000432057 SETXQ7Z333 2677 aaKnown RBP14.49□□□□□ -0.09
VRK2-205ENST00000432057 FXYD7P58549 80 aa14.49□□□□□ -0.09
VRK2-205ENST00000432057 MAP6D1Q9H9H5 199 aa14.49□□□□□ -0.09
VRK2-205ENST00000432057 SYS1-DBNDD2H3BUS1 97 aa14.48□□□□□ -0.09
VRK2-205ENST00000432057 NDUFA7O95182 113 aa14.48□□□□□ -0.09
VRK2-205ENST00000432057 HLA-DRB4P13762 266 aa14.48□□□□□ -0.09
VRK2-205ENST00000432057 HSPB8Q9UJY1 196 aa14.48□□□□□ -0.09
VRK2-205ENST00000432057 HLA-DRB4X5D2U9 266 aa14.48□□□□□ -0.09
VRK2-205ENST00000432057 NXPH4O95158 308 aa14.48□□□□□ -0.09
VRK2-205ENST00000432057 NRACQ8N912 160 aa14.48□□□□□ -0.09
VRK2-205ENST00000432057 OR2K2Q8NGT1 345 aa14.48□□□□□ -0.09
VRK2-205ENST00000432057 DEFA6Q01524 100 aa14.47□□□□□ -0.09
VRK2-205ENST00000432057 C14orf178Q8N769 122 aaPredicted RBP14.47□□□□□ -0.09
VRK2-205ENST00000432057 C20orf144Q9BQM9 153 aa14.47□□□□□ -0.09
VRK2-205ENST00000432057 DPH3P1Q9H4G8 78 aa14.47□□□□□ -0.09
VRK2-205ENST00000432057 RBMY1BA6NDE4 496 aaKnown RBP14.46□□□□□ -0.09
VRK2-205ENST00000432057 RBMY1EA6NEQ0 496 aaKnown RBP14.46□□□□□ -0.09
VRK2-205ENST00000432057 A8MTW9 85 aa14.46□□□□□ -0.09
VRK2-205ENST00000432057 H3BMM0 161 aa14.46□□□□□ -0.09
VRK2-205ENST00000432057 RBMY1DP0C7P1 496 aaKnown RBP14.46□□□□□ -0.09
VRK2-205ENST00000432057 MAP1LC3CQ9BXW4 147 aa14.46□□□□□ -0.09
VRK2-205ENST00000432057 IGHV1OR15-1A0A075B7D0 117 aa14.46□□□□□ -0.1
VRK2-205ENST00000432057 OR4C46A6NHA9 309 aa14.46□□□□□ -0.1
VRK2-205ENST00000432057 CRXO43186 299 aaPredicted RBP14.46□□□□□ -0.1
VRK2-205ENST00000432057 AP1S3Q96PC3 154 aa14.46□□□□□ -0.1
VRK2-205ENST00000432057 JMJD8Q96S16 334 aa14.46□□□□□ -0.1
VRK2-205ENST00000432057 SPAG8Q99932 426 aaPredicted RBP14.46□□□□□ -0.1
VRK2-205ENST00000432057 IGHV3-16A0A0C4DH30 117 aa14.45□□□□□ -0.1
VRK2-205ENST00000432057 H0Y8G0 127 aa14.45□□□□□ -0.1
VRK2-205ENST00000432057 PROK1P58294 105 aa14.45□□□□□ -0.1
VRK2-205ENST00000432057 SPATA45Q537H7 98 aa14.45□□□□□ -0.1
VRK2-205ENST00000432057 MRAP2Q96G30 205 aa14.45□□□□□ -0.1
VRK2-205ENST00000432057 ZNF747Q9BV97 191 aa14.45□□□□□ -0.1
VRK2-205ENST00000432057 ZNF256Q9Y2P7 627 aaPredicted RBP14.45□□□□□ -0.1
VRK2-205ENST00000432057 INAFM1C9JVW0 142 aa14.44□□□□□ -0.1
VRK2-205ENST00000432057 HBDP02042 147 aa14.44□□□□□ -0.1
VRK2-205ENST00000432057 MGPP08493 103 aa14.44□□□□□ -0.1
VRK2-205ENST00000432057 RBMY1A1P0DJD3 496 aaKnown RBP14.44□□□□□ -0.1
VRK2-205ENST00000432057 RBMY1CP0DJD4 496 aa14.44□□□□□ -0.1
VRK2-205ENST00000432057 FOSL1P15407 271 aa14.44□□□□□ -0.1
VRK2-205ENST00000432057 RBMY1FQ15415 496 aaKnown RBP14.44□□□□□ -0.1
VRK2-205ENST00000432057 MAJINQ3KP22 176 aa14.44□□□□□ -0.1
VRK2-205ENST00000432057 Q8N1Y9 231 aa14.44□□□□□ -0.1
VRK2-205ENST00000432057 C14orf144Q96I85 54 aa14.44□□□□□ -0.1
VRK2-205ENST00000432057 NDUFAF3Q9BU61 184 aa14.44□□□□□ -0.1
VRK2-205ENST00000432057 NXT2Q9NPJ8 142 aaKnown RBP14.44□□□□□ -0.1
VRK2-205ENST00000432057 LINC01546A6NGU7 62 aa14.44□□□□□ -0.1
VRK2-205ENST00000432057 C9orf85Q96MD7 179 aa14.44□□□□□ -0.1
VRK2-205ENST00000432057 MDFICQ9P1T7 246 aa14.44□□□□□ -0.1
VRK2-205ENST00000432057 ADARB2-AS1A8MUL3 147 aa14.43□□□□□ -0.1
VRK2-205ENST00000432057 Q8N8P6 123 aa14.43□□□□□ -0.1
VRK2-205ENST00000432057 MCRIP2Q9BUT9 160 aaKnown RBP14.43□□□□□ -0.1
VRK2-205ENST00000432057 NSD1Q96L73 2696 aaPredicted RBP14.43□□□□□ -0.1
VRK2-205ENST00000432057 FLNBO75369 2602 aaKnown RBP14.42□□□□□ -0.1
VRK2-205ENST00000432057 IGLV2-18A0A075B6J9 118 aa14.42□□□□□ -0.1
VRK2-205ENST00000432057 TRAV25A0A0B4J276 109 aa14.42□□□□□ -0.1
VRK2-205ENST00000432057 NSUN5P1Q3KNT7 163 aa14.42□□□□□ -0.1
VRK2-205ENST00000432057 PET117Q6UWS5 81 aa14.42□□□□□ -0.1
VRK2-205ENST00000432057 C20orf202A1L168 122 aa14.42□□□□□ -0.1
VRK2-205ENST00000432057 ODF3L2Q3SX64 289 aa14.42□□□□□ -0.1
VRK2-205ENST00000432057 JPT2Q9H910 190 aa14.42□□□□□ -0.1
VRK2-205ENST00000432057 ZNF705AQ6ZN79 300 aaPredicted RBP14.41□□□□□ -0.1
VRK2-205ENST00000432057 KIF25-AS1Q9Y6Z4 181 aa14.41□□□□□ -0.1
VRK2-205ENST00000432057 PRSS47A8MTI9 375 aa14.4□□□□□ -0.1
VRK2-205ENST00000432057 RASL10AQ92737 203 aa14.4□□□□□ -0.1
VRK2-205ENST00000432057 RPL39LQ96EH5 51 aaKnown RBP14.4□□□□□ -0.1
VRK2-205ENST00000432057 TRAV9-2A0A087WT02 112 aa14.4□□□□□ -0.1
VRK2-205ENST00000432057 KRTAP10-3P60369 221 aa14.39□□□□□ -0.11
VRK2-205ENST00000432057 CTAG1AP78358 180 aa14.39□□□□□ -0.11
VRK2-205ENST00000432057 DEFB125Q8N687 156 aa14.39□□□□□ -0.11
VRK2-205ENST00000432057 PMCHL2Q9BQD1 86 aa14.39□□□□□ -0.11
VRK2-205ENST00000432057 CBY3A6NI87 242 aa14.38□□□□□ -0.11
VRK2-205ENST00000432057 SAP30O75446 220 aa14.38□□□□□ -0.11
VRK2-205ENST00000432057 SMIM17P0DL12 118 aa14.38□□□□□ -0.11
VRK2-205ENST00000432057 LINC00315P59091 139 aa14.38□□□□□ -0.11
VRK2-205ENST00000432057 LINC01545Q5VT33 79 aa14.38□□□□□ -0.11
VRK2-205ENST00000432057 MIEN1Q9BRT3 115 aa14.38□□□□□ -0.11
VRK2-205ENST00000432057 NIPBLQ6KC79 2804 aaeCLIP14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 101.2 ms