RNA–Protein interactions for RNA: ENST00000431283.1

PTPN4-204, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-204ENST00000431283 SELENOTP62341 195 aa2.25□□□□□ -2.05
PTPN4-204ENST00000431283 LYZL2Q7Z4W2 148 aa2.25□□□□□ -2.05
PTPN4-204ENST00000431283 CLVS1Q8IUQ0 354 aaPredicted RBP2.25□□□□□ -2.05
PTPN4-204ENST00000431283 ZNF680Q8NEM1 530 aa2.25□□□□□ -2.05
PTPN4-204ENST00000431283 RMI2Q96E14 147 aa2.25□□□□□ -2.05
PTPN4-204ENST00000431283 YIPF6Q96EC8 236 aa2.25□□□□□ -2.05
PTPN4-204ENST00000431283 SHANK2-AS3Q9BTD1 123 aa2.25□□□□□ -2.05
PTPN4-204ENST00000431283 MCUBQ9NWR8 336 aa2.25□□□□□ -2.05
PTPN4-204ENST00000431283 RABL2AQ9UBK7 228 aaPredicted RBP2.25□□□□□ -2.05
PTPN4-204ENST00000431283 RABL2BQ9UNT1 228 aa2.25□□□□□ -2.05
PTPN4-204ENST00000431283 STRAPQ9Y3F4 350 aaKnown RBP2.25□□□□□ -2.05
PTPN4-204ENST00000431283 ICOSQ9Y6W8 199 aa2.25□□□□□ -2.05
PTPN4-204ENST00000431283 VPS13BQ7Z7G8 4022 aa2.25□□□□□ -2.05
PTPN4-204ENST00000431283 HMCN2Q8NDA2 5059 aa2.24□□□□□ -2.05
PTPN4-204ENST00000431283 IGKV1OR2-108A0A075B7D4 117 aa2.24□□□□□ -2.05
PTPN4-204ENST00000431283 A0A087WTM6 91 aa2.24□□□□□ -2.05
PTPN4-204ENST00000431283 A0A096LPF7 62 aa2.24□□□□□ -2.05
PTPN4-204ENST00000431283 TRGV1A0A0A0MS02 117 aa2.24□□□□□ -2.05
PTPN4-204ENST00000431283 H3BRN7 92 aa2.24□□□□□ -2.05
PTPN4-204ENST00000431283 WRBO00258 174 aa2.24□□□□□ -2.05
PTPN4-204ENST00000431283 PSCAO43653 123 aa2.24□□□□□ -2.05
PTPN4-204ENST00000431283 SYNGR2O43760 224 aa2.24□□□□□ -2.05
PTPN4-204ENST00000431283 ATP6V1G2O95670 118 aa2.24□□□□□ -2.05
PTPN4-204ENST00000431283 LINC00869P0C866 280 aa2.24□□□□□ -2.05
PTPN4-204ENST00000431283 SLC25A6P12236 298 aa2.24□□□□□ -2.05
PTPN4-204ENST00000431283 FAUP35544 74 aaKnown RBP2.24□□□□□ -2.05
PTPN4-204ENST00000431283 RAB31Q13636 194 aa2.24□□□□□ -2.05
PTPN4-204ENST00000431283 MRPL23Q16540 153 aaKnown RBP2.24□□□□□ -2.05
PTPN4-204ENST00000431283 SPANXN5Q5MJ07 72 aa2.24□□□□□ -2.05
PTPN4-204ENST00000431283 LCN15Q6UWW0 184 aa2.24□□□□□ -2.05
PTPN4-204ENST00000431283 CYP2G1PQ6ZSU1 146 aa2.24□□□□□ -2.05
PTPN4-204ENST00000431283 NEGR1Q7Z3B1 354 aa2.24□□□□□ -2.05
PTPN4-204ENST00000431283 TMED4Q7Z7H5 227 aa2.24□□□□□ -2.05
PTPN4-204ENST00000431283 CAMK2N1Q7Z7J9 78 aa2.24□□□□□ -2.05
PTPN4-204ENST00000431283 BPIFA4PQ86YQ2 179 aa2.24□□□□□ -2.05
PTPN4-204ENST00000431283 C10orf126Q8N4M7 172 aa2.24□□□□□ -2.05
PTPN4-204ENST00000431283 SMIM4Q8WVI0 70 aa2.24□□□□□ -2.05
PTPN4-204ENST00000431283 PGLYRP4Q96LB8 373 aa2.24□□□□□ -2.05
PTPN4-204ENST00000431283 SLC50A1Q9BRV3 221 aa2.24□□□□□ -2.05
PTPN4-204ENST00000431283 LY96Q9Y6Y9 160 aa2.24□□□□□ -2.05
PTPN4-204ENST00000431283 FLG2Q5D862 2391 aaPredicted RBP2.24□□□□□ -2.05
PTPN4-204ENST00000431283 RNF213Q63HN8 5207 aa2.23□□□□□ -2.05
PTPN4-204ENST00000431283 TRAV5A0A0B4J249 113 aa2.23□□□□□ -2.05
PTPN4-204ENST00000431283 TRAV12-3A0A0B4J271 114 aa2.23□□□□□ -2.05
PTPN4-204ENST00000431283 GOSR2O14653 212 aa2.23□□□□□ -2.05
PTPN4-204ENST00000431283 PITX3O75364 302 aa2.23□□□□□ -2.05
PTPN4-204ENST00000431283 SLC25A5P05141 298 aaKnown RBP2.23□□□□□ -2.05
PTPN4-204ENST00000431283 SRIP30626 198 aa2.23□□□□□ -2.05
PTPN4-204ENST00000431283 FUSP35637 526 aaKnown RBP eCLIP2.23□□□□□ -2.05
PTPN4-204ENST00000431283 NMUP48645 174 aa2.23□□□□□ -2.05
PTPN4-204ENST00000431283 AP3S2P59780 193 aa2.23□□□□□ -2.05
PTPN4-204ENST00000431283 PLP1P60201 277 aa2.23□□□□□ -2.05
PTPN4-204ENST00000431283 POLR2GP62487 172 aaKnown RBP eCLIP2.23□□□□□ -2.05
PTPN4-204ENST00000431283 IL18Q14116 193 aa2.23□□□□□ -2.05
PTPN4-204ENST00000431283 GUK1Q16774 197 aa2.23□□□□□ -2.05
PTPN4-204ENST00000431283 ZNF674Q2M3X9 581 aa2.23□□□□□ -2.05
PTPN4-204ENST00000431283 TMEM128Q5BJH2 165 aa2.23□□□□□ -2.05
PTPN4-204ENST00000431283 LYPD5Q6UWN5 251 aa2.23□□□□□ -2.05
PTPN4-204ENST00000431283 Q6ZRN7 208 aaPredicted RBP2.23□□□□□ -2.05
PTPN4-204ENST00000431283 Q6ZTI0 123 aa2.23□□□□□ -2.05
PTPN4-204ENST00000431283 ACOT7LQ6ZUV0 252 aa2.23□□□□□ -2.05
PTPN4-204ENST00000431283 LINC00305Q7Z4B0 112 aa2.23□□□□□ -2.05
PTPN4-204ENST00000431283 ZNF546Q86UE3 836 aa2.23□□□□□ -2.05
PTPN4-204ENST00000431283 OR10P1Q8NGE3 313 aa2.23□□□□□ -2.05
PTPN4-204ENST00000431283 ZNF431Q8TF32 576 aaPredicted RBP2.23□□□□□ -2.05
PTPN4-204ENST00000431283 DEFB104AQ8WTQ1 72 aa2.23□□□□□ -2.05
PTPN4-204ENST00000431283 DIRAS2Q96HU8 199 aa2.23□□□□□ -2.05
PTPN4-204ENST00000431283 ODF3Q96PU9 254 aa2.23□□□□□ -2.05
PTPN4-204ENST00000431283 TMEM70Q9BUB7 260 aa2.23□□□□□ -2.05
PTPN4-204ENST00000431283 ARL6Q9H0F7 186 aa2.23□□□□□ -2.05
PTPN4-204ENST00000431283 ARV1Q9H2C2 271 aa2.23□□□□□ -2.05
PTPN4-204ENST00000431283 NPVFQ9HCQ7 196 aa2.23□□□□□ -2.05
PTPN4-204ENST00000431283 PSENENQ9NZ42 101 aa2.23□□□□□ -2.05
PTPN4-204ENST00000431283 RSL24D1Q9UHA3 163 aaKnown RBP2.23□□□□□ -2.05
PTPN4-204ENST00000431283 PRO0255Q9UI72 69 aa2.23□□□□□ -2.05
PTPN4-204ENST00000431283 HHLA3Q9XRX5 114 aa2.23□□□□□ -2.05
PTPN4-204ENST00000431283 FUT9Q9Y231 359 aa2.23□□□□□ -2.05
PTPN4-204ENST00000431283 PXMP4Q9Y6I8 212 aa2.23□□□□□ -2.05
PTPN4-204ENST00000431283 TRGV4A0A0C4DH28 118 aa2.22□□□□□ -2.05
PTPN4-204ENST00000431283 ANKRD20A5PA0PJZ0 165 aa2.22□□□□□ -2.05
PTPN4-204ENST00000431283 C7orf71A4D174 169 aa2.22□□□□□ -2.05
PTPN4-204ENST00000431283 COLCA2A8K830 154 aa2.22□□□□□ -2.05
PTPN4-204ENST00000431283 FNDC10F2Z333 226 aa2.22□□□□□ -2.05
PTPN4-204ENST00000431283 H3BP45 60 aa2.22□□□□□ -2.05
PTPN4-204ENST00000431283 COX7A2P2O60397 106 aa2.22□□□□□ -2.05
PTPN4-204ENST00000431283 SPINK4O60575 86 aa2.22□□□□□ -2.05
PTPN4-204ENST00000431283 MPDU1O75352 247 aa2.22□□□□□ -2.05
PTPN4-204ENST00000431283 SFT2D2O95562 160 aa2.22□□□□□ -2.05
PTPN4-204ENST00000431283 IGHV3-53P01767 116 aa2.22□□□□□ -2.05
PTPN4-204ENST00000431283 ORM1P02763 201 aa2.22□□□□□ -2.05
PTPN4-204ENST00000431283 GPX1P07203 203 aa2.22□□□□□ -2.05
PTPN4-204ENST00000431283 CRYGDP07320 174 aa2.22□□□□□ -2.05
PTPN4-204ENST00000431283 RNASE4P34096 147 aaKnown RBP2.22□□□□□ -2.05
PTPN4-204ENST00000431283 RRAS2P62070 204 aaPredicted RBP2.22□□□□□ -2.05
PTPN4-204ENST00000431283 C10orf113Q5VZT2 155 aa2.22□□□□□ -2.05
PTPN4-204ENST00000431283 TOMM5Q8N4H5 51 aa2.22□□□□□ -2.05
PTPN4-204ENST00000431283 C12orf45Q8N5I9 185 aaPredicted RBP2.22□□□□□ -2.05
PTPN4-204ENST00000431283 EIF4E3Q8N5X7 224 aaKnown RBP2.22□□□□□ -2.05
PTPN4-204ENST00000431283 NKAPP1Q8N9T2 125 aa2.22□□□□□ -2.05
PTPN4-204ENST00000431283 SLC25A21Q9BQT8 299 aaPredicted RBP2.22□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms