RNA–Protein interactions for RNA: ENST00000429670.2

GYPB-201, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best) BASIC

Gene GYPB, Length 239 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-201ENST00000429670 SPINK13Q1W4C9 94 aa0.73□□□□□ -2.29
GYPB-201ENST00000429670 C5orf56Q8N8D9 126 aa0.73□□□□□ -2.29
GYPB-201ENST00000429670 VSTM2AQ8TAG5 236 aa0.73□□□□□ -2.29
GYPB-201ENST00000429670 PPP1R1CQ8WVI7 109 aa0.73□□□□□ -2.29
GYPB-201ENST00000429670 C1orf54Q8WWF1 131 aa0.73□□□□□ -2.29
GYPB-201ENST00000429670 SDF2Q99470 211 aa0.73□□□□□ -2.29
GYPB-201ENST00000429670 CCDC167Q9P0B6 97 aa0.73□□□□□ -2.29
GYPB-201ENST00000429670 BLMP54132 1417 aaPredicted RBP0.72□□□□□ -2.29
GYPB-201ENST00000429670 TMEM2Q9UHN6 1383 aa0.72□□□□□ -2.29
GYPB-201ENST00000429670 CTTNBP2Q8WZ74 1663 aa0.72□□□□□ -2.29
GYPB-201ENST00000429670 ZFC3H1O60293 1989 aaKnown RBP0.72□□□□□ -2.29
GYPB-201ENST00000429670 ADGRB1O14514 1584 aa0.72□□□□□ -2.29
GYPB-201ENST00000429670 LOC101927531A0A1B0GV80 90 aa0.72□□□□□ -2.29
GYPB-201ENST00000429670 EFCAB10A6NFE3 127 aa0.72□□□□□ -2.29
GYPB-201ENST00000429670 PITX3O75364 302 aa0.72□□□□□ -2.29
GYPB-201ENST00000429670 PYYP10082 97 aa0.72□□□□□ -2.29
GYPB-201ENST00000429670 RRAS2P62070 204 aaPredicted RBP0.72□□□□□ -2.29
GYPB-201ENST00000429670 KLKP1Q107X0 134 aa0.72□□□□□ -2.29
GYPB-201ENST00000429670 SPINK9Q5DT21 86 aa0.72□□□□□ -2.29
GYPB-201ENST00000429670 PLAC4Q8WY50 150 aa0.72□□□□□ -2.29
GYPB-201ENST00000429670 LINC00208Q96KT6 92 aa0.72□□□□□ -2.29
GYPB-201ENST00000429670 ERCC6Q03468 1493 aa0.72□□□□□ -2.29
GYPB-201ENST00000429670 SYNJ1O43426 1573 aa0.71□□□□□ -2.3
GYPB-201ENST00000429670 CASP8AP2Q9UKL3 1982 aa0.71□□□□□ -2.3
GYPB-201ENST00000429670 SLC25A6P12236 298 aa0.71□□□□□ -2.3
GYPB-201ENST00000429670 SPCS2Q15005 226 aa0.71□□□□□ -2.3
GYPB-201ENST00000429670 OR2T2Q6IF00 324 aa0.71□□□□□ -2.3
GYPB-201ENST00000429670 ZCCHC6Q5VYS8 1495 aaKnown RBP0.71□□□□□ -2.3
GYPB-201ENST00000429670 ASH1LQ9NR48 2969 aaKnown RBP0.71□□□□□ -2.3
GYPB-201ENST00000429670 ZGRF1Q86YA3 2104 aa0.7□□□□□ -2.3
GYPB-201ENST00000429670 TRAV12-2A0A075B6T6 113 aa0.7□□□□□ -2.3
GYPB-201ENST00000429670 A0A096LNT2 108 aa0.7□□□□□ -2.3
GYPB-201ENST00000429670 TRAV17A0A0B4J275 112 aa0.7□□□□□ -2.3
GYPB-201ENST00000429670 ZNF56Q15929 161 aa0.7□□□□□ -2.3
GYPB-201ENST00000429670 SPANXN1Q5VSR9 72 aa0.7□□□□□ -2.3
GYPB-201ENST00000429670 Q6ZUT4 128 aa0.7□□□□□ -2.3
GYPB-201ENST00000429670 TSC22D3Q99576 134 aa0.7□□□□□ -2.3
GYPB-201ENST00000429670 FANCMQ8IYD8 2048 aa0.7□□□□□ -2.3
GYPB-201ENST00000429670 SIPA1L2Q9P2F8 1722 aaPredicted RBP0.69□□□□□ -2.3
GYPB-201ENST00000429670 GRIN2AQ12879 1464 aa0.69□□□□□ -2.3
GYPB-201ENST00000429670 CDK12Q9NYV4 1490 aaPredicted RBP0.69□□□□□ -2.3
GYPB-201ENST00000429670 MCRIP1C9JLW8 97 aa0.69□□□□□ -2.3
GYPB-201ENST00000429670 EMX2Q04743 252 aa0.69□□□□□ -2.3
GYPB-201ENST00000429670 IQCJQ1A5X6 159 aa0.69□□□□□ -2.3
GYPB-201ENST00000429670 MIC13Q5XKP0 118 aa0.69□□□□□ -2.3
GYPB-201ENST00000429670 Q86TA4 180 aa0.69□□□□□ -2.3
GYPB-201ENST00000429670 BET1LQ9NYM9 111 aa0.69□□□□□ -2.3
GYPB-201ENST00000429670 NDUFA12Q9UI09 145 aa0.69□□□□□ -2.3
GYPB-201ENST00000429670 LRP5O75197 1615 aa0.68□□□□□ -2.3
GYPB-201ENST00000429670 PTPRDP23468 1912 aa0.68□□□□□ -2.3
GYPB-201ENST00000429670 NINQ8N4C6 2090 aa0.68□□□□□ -2.3
GYPB-201ENST00000429670 RPL37P61927 97 aaKnown RBP0.68□□□□□ -2.3
GYPB-201ENST00000429670 KCNRGQ8N5I3 272 aa0.68□□□□□ -2.3
GYPB-201ENST00000429670 ARL11Q969Q4 196 aa0.68□□□□□ -2.3
GYPB-201ENST00000429670 DPH3Q96FX2 82 aa0.68□□□□□ -2.3
GYPB-201ENST00000429670 TMEM141Q96I45 108 aa0.68□□□□□ -2.3
GYPB-201ENST00000429670 PSMG3Q9BT73 122 aaPredicted RBP0.68□□□□□ -2.3
GYPB-201ENST00000429670 LINC00470Q9BZP3 86 aa0.68□□□□□ -2.3
GYPB-201ENST00000429670 TMEM14BQ9NUH8 114 aa0.68□□□□□ -2.3
GYPB-201ENST00000429670 COA4Q9NYJ1 87 aa0.68□□□□□ -2.3
GYPB-201ENST00000429670 LAMA4Q16363 1823 aa0.68□□□□□ -2.3
GYPB-201ENST00000429670 PTPRMP28827 1452 aa0.67□□□□□ -2.3
GYPB-201ENST00000429670 CITO14578 2027 aa0.67□□□□□ -2.3
GYPB-201ENST00000429670 DAPK1P53355 1430 aa0.67□□□□□ -2.3
GYPB-201ENST00000429670 PIRTP0C851 137 aa0.67□□□□□ -2.3
GYPB-201ENST00000429670 BTG2P78543 158 aa0.67□□□□□ -2.3
GYPB-201ENST00000429670 PRB3Q04118 309 aaPredicted RBP0.67□□□□□ -2.3
GYPB-201ENST00000429670 C9orf116Q5BN46 136 aaPredicted RBP0.67□□□□□ -2.3
GYPB-201ENST00000429670 SLC48A1Q6P1K1 146 aa0.67□□□□□ -2.3
GYPB-201ENST00000429670 TSKUQ8WUA8 353 aa0.67□□□□□ -2.3
GYPB-201ENST00000429670 COPS9Q8WXC6 57 aa0.67□□□□□ -2.3
GYPB-201ENST00000429670 IFI27L1Q96BM0 104 aa0.67□□□□□ -2.3
GYPB-201ENST00000429670 SNRNP25Q9BV90 132 aaKnown RBP0.67□□□□□ -2.3
GYPB-201ENST00000429670 FAM107BQ9H098 131 aa0.67□□□□□ -2.3
GYPB-201ENST00000429670 ANK1P16157 1881 aa0.67□□□□□ -2.3
GYPB-201ENST00000429670 BICRAQ9NZM4 1560 aa0.66□□□□□ -2.3
GYPB-201ENST00000429670 VIRMAQ69YN4 1812 aaKnown RBP0.66□□□□□ -2.3
GYPB-201ENST00000429670 MYH1P12882 1939 aa0.66□□□□□ -2.3
GYPB-201ENST00000429670 HELZP42694 1942 aaKnown RBP0.66□□□□□ -2.3
GYPB-201ENST00000429670 MYOM3Q5VTT5 1437 aa0.66□□□□□ -2.3
GYPB-201ENST00000429670 A0A0D9SG42 100 aa0.66□□□□□ -2.3
GYPB-201ENST00000429670 FAM92AA1XBS5 289 aa0.66□□□□□ -2.3
GYPB-201ENST00000429670 NDUFB6O95139 128 aa0.66□□□□□ -2.3
GYPB-201ENST00000429670 PIPP12273 146 aaPredicted RBP0.66□□□□□ -2.3
GYPB-201ENST00000429670 ZNF469Q96JG9 3925 aaPredicted RBP0.66□□□□□ -2.3
GYPB-201ENST00000429670 TCRBV3S1A0A5B6 114 aa0.65□□□□□ -2.31
GYPB-201ENST00000429670 RBAKDNA6NC62 111 aa0.65□□□□□ -2.31
GYPB-201ENST00000429670 ZNF137PP52743 207 aa0.65□□□□□ -2.31
GYPB-201ENST00000429670 SSBP1Q04837 148 aaKnown RBP0.65□□□□□ -2.31
GYPB-201ENST00000429670 CYP2G1PQ6ZSU1 146 aa0.65□□□□□ -2.31
GYPB-201ENST00000429670 C10orf95Q9H7T3 257 aa0.65□□□□□ -2.31
GYPB-201ENST00000429670 TMEM242Q9NWH2 141 aa0.65□□□□□ -2.31
GYPB-201ENST00000429670 ZDBF2Q9HCK1 2354 aa0.64□□□□□ -2.31
GYPB-201ENST00000429670 TRAV12-3A0A0B4J271 114 aa0.64□□□□□ -2.31
GYPB-201ENST00000429670 M0R129 80 aa0.64□□□□□ -2.31
GYPB-201ENST00000429670 FXYD1O00168 92 aa0.64□□□□□ -2.31
GYPB-201ENST00000429670 IFNA17P01571 189 aa0.64□□□□□ -2.31
GYPB-201ENST00000429670 APODP05090 189 aa0.64□□□□□ -2.31
GYPB-201ENST00000429670 IL5P05113 134 aa0.64□□□□□ -2.31
GYPB-201ENST00000429670 CCL3L1P16619 93 aa0.64□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms