RNA–Protein interactions for RNA: ENST00000428983.2

PCDH8P1-201, Transcript of protocadherin 8 pseudogene 1, humanhuman

BASIC

Gene PCDH8P1, Length 2,773 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8P1-201ENST00000428983 TRBV12-3P01733 135 aa12.85□□□□□ -0.35
PCDH8P1-201ENST00000428983 ZNF502Q8TBZ5 544 aa12.85□□□□□ -0.35
PCDH8P1-201ENST00000428983 PTH2Q96A98 100 aa12.85□□□□□ -0.35
PCDH8P1-201ENST00000428983 CREBBPQ92793 2442 aa12.84□□□□□ -0.35
PCDH8P1-201ENST00000428983 PTPN13Q12923 2485 aa12.84□□□□□ -0.35
PCDH8P1-201ENST00000428983 MYMXA0A1B0GTQ4 84 aa12.84□□□□□ -0.35
PCDH8P1-201ENST00000428983 IGHV4-38-2P0DP08 117 aa12.84□□□□□ -0.35
PCDH8P1-201ENST00000428983 TAL2Q16559 108 aa12.84□□□□□ -0.35
PCDH8P1-201ENST00000428983 SPANXN1Q5VSR9 72 aa12.84□□□□□ -0.35
PCDH8P1-201ENST00000428983 Q6ZS46 218 aa12.84□□□□□ -0.35
PCDH8P1-201ENST00000428983 NFE4Q86UQ8 179 aa12.84□□□□□ -0.35
PCDH8P1-201ENST00000428983 CLPSL1A2RUU4 121 aa12.83□□□□□ -0.36
PCDH8P1-201ENST00000428983 OR11H12B2RN74 326 aa12.83□□□□□ -0.36
PCDH8P1-201ENST00000428983 HLA-DRB4P13762 266 aa12.83□□□□□ -0.36
PCDH8P1-201ENST00000428983 SRSF2Q01130 221 aaKnown RBP12.83□□□□□ -0.36
PCDH8P1-201ENST00000428983 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.83□□□□□ -0.36
PCDH8P1-201ENST00000428983 ZFP2Q6ZN57 461 aa12.83□□□□□ -0.36
PCDH8P1-201ENST00000428983 SYT8Q8NBV8 401 aa12.83□□□□□ -0.36
PCDH8P1-201ENST00000428983 OR11H1Q8NG94 326 aa12.83□□□□□ -0.36
PCDH8P1-201ENST00000428983 OR11H2Q8NH07 326 aa12.83□□□□□ -0.36
PCDH8P1-201ENST00000428983 GLMPQ8WWB7 406 aa12.83□□□□□ -0.36
PCDH8P1-201ENST00000428983 ZFAND3Q9H8U3 227 aa12.83□□□□□ -0.36
PCDH8P1-201ENST00000428983 HLA-DRB4X5D2U9 266 aa12.83□□□□□ -0.36
PCDH8P1-201ENST00000428983 TRAV26-1A0A087WT03 109 aa12.83□□□□□ -0.36
PCDH8P1-201ENST00000428983 H3BVH4 76 aa12.83□□□□□ -0.36
PCDH8P1-201ENST00000428983 HOXA3O43365 443 aaPredicted RBP12.83□□□□□ -0.36
PCDH8P1-201ENST00000428983 IGHV3-11P01762 117 aa12.83□□□□□ -0.36
PCDH8P1-201ENST00000428983 IGF1P05019 195 aa12.83□□□□□ -0.36
PCDH8P1-201ENST00000428983 FHL3Q13643 280 aa12.83□□□□□ -0.36
PCDH8P1-201ENST00000428983 ZNF469Q96JG9 3925 aaPredicted RBP12.83□□□□□ -0.36
PCDH8P1-201ENST00000428983 F8VRH5 84 aa12.82□□□□□ -0.36
PCDH8P1-201ENST00000428983 BUB3O43684 328 aa12.82□□□□□ -0.36
PCDH8P1-201ENST00000428983 LGALS1P09382 135 aaKnown RBP12.82□□□□□ -0.36
PCDH8P1-201ENST00000428983 PLNP26678 52 aa12.82□□□□□ -0.36
PCDH8P1-201ENST00000428983 PLEKHB2Q96CS7 222 aa12.82□□□□□ -0.36
PCDH8P1-201ENST00000428983 MRPL16Q9NX20 251 aaKnown RBP12.82□□□□□ -0.36
PCDH8P1-201ENST00000428983 PRSS29PA6NIE9 313 aa12.82□□□□□ -0.36
PCDH8P1-201ENST00000428983 FAM110DQ8TAY7 271 aaPredicted RBP12.82□□□□□ -0.36
PCDH8P1-201ENST00000428983 ZNF48Q96MX3 618 aaPredicted RBP12.82□□□□□ -0.36
PCDH8P1-201ENST00000428983 ANKRD17O75179 2603 aaKnown RBP12.82□□□□□ -0.36
PCDH8P1-201ENST00000428983 LINC01549A6NIU2 74 aa12.81□□□□□ -0.36
PCDH8P1-201ENST00000428983 H7C1H1 209 aa12.81□□□□□ -0.36
PCDH8P1-201ENST00000428983 FOXI1Q12951 378 aa12.81□□□□□ -0.36
PCDH8P1-201ENST00000428983 KLHL30-AS1Q8NEE0 82 aa12.81□□□□□ -0.36
PCDH8P1-201ENST00000428983 ZNF418Q8TF45 676 aaPredicted RBP12.81□□□□□ -0.36
PCDH8P1-201ENST00000428983 SCGB3A1Q96QR1 104 aa12.81□□□□□ -0.36
PCDH8P1-201ENST00000428983 PRORYQ9H606 182 aa12.81□□□□□ -0.36
PCDH8P1-201ENST00000428983 LOC107984156A0A0G2JMH3 177 aa12.81□□□□□ -0.36
PCDH8P1-201ENST00000428983 ARL17AQ8IVW1 177 aa12.81□□□□□ -0.36
PCDH8P1-201ENST00000428983 RPL39LQ96EH5 51 aaKnown RBP12.81□□□□□ -0.36
PCDH8P1-201ENST00000428983 PSMB2P49721 201 aa12.81□□□□□ -0.36
PCDH8P1-201ENST00000428983 C5orf56Q8N8D9 126 aa12.81□□□□□ -0.36
PCDH8P1-201ENST00000428983 CDIP1Q9H305 208 aa12.81□□□□□ -0.36
PCDH8P1-201ENST00000428983 TMEM78Q5T7P6 136 aa12.8□□□□□ -0.36
PCDH8P1-201ENST00000428983 PRR9Q5T870 116 aa12.8□□□□□ -0.36
PCDH8P1-201ENST00000428983 NBPF19A0A087WUL8 3843 aa12.8□□□□□ -0.36
PCDH8P1-201ENST00000428983 TRAV8-2A0A0B4J237 113 aa12.8□□□□□ -0.36
PCDH8P1-201ENST00000428983 OOSP1A8MZH6 123 aa12.8□□□□□ -0.36
PCDH8P1-201ENST00000428983 TGFAP01135 160 aa12.8□□□□□ -0.36
PCDH8P1-201ENST00000428983 MT-ATP8P03928 68 aa12.8□□□□□ -0.36
PCDH8P1-201ENST00000428983 EMP1P54849 157 aa12.8□□□□□ -0.36
PCDH8P1-201ENST00000428983 UNQ9165/PRO28630Q6UXU0 137 aa12.8□□□□□ -0.36
PCDH8P1-201ENST00000428983 PRADC1Q9BSG0 188 aa12.8□□□□□ -0.36
PCDH8P1-201ENST00000428983 M0R381 172 aa12.79□□□□□ -0.36
PCDH8P1-201ENST00000428983 MAPK1IP1LQ8NDC0 245 aa12.79□□□□□ -0.36
PCDH8P1-201ENST00000428983 SMIM2Q9BVW6 85 aa12.79□□□□□ -0.36
PCDH8P1-201ENST00000428983 BLCAPP62952 87 aa12.79□□□□□ -0.36
PCDH8P1-201ENST00000428983 CFAP126Q5VTH2 177 aa12.79□□□□□ -0.36
PCDH8P1-201ENST00000428983 TEX15Q9BXT5 2789 aa12.78□□□□□ -0.36
PCDH8P1-201ENST00000428983 IGHV4-30-2A0A087WSY4 118 aa12.78□□□□□ -0.36
PCDH8P1-201ENST00000428983 ZNF815PA8K554 130 aa12.78□□□□□ -0.36
PCDH8P1-201ENST00000428983 SLC25A16P16260 332 aa12.78□□□□□ -0.36
PCDH8P1-201ENST00000428983 EDN2P20800 178 aa12.78□□□□□ -0.36
PCDH8P1-201ENST00000428983 SCGB1D4Q6XE38 83 aa12.78□□□□□ -0.36
PCDH8P1-201ENST00000428983 NEXN-AS1Q8NBZ9 246 aa12.78□□□□□ -0.36
PCDH8P1-201ENST00000428983 CRYBA4P53673 196 aa12.77□□□□□ -0.36
PCDH8P1-201ENST00000428983 C1QTNF4Q9BXJ3 329 aa12.77□□□□□ -0.36
PCDH8P1-201ENST00000428983 GEMIN7Q9H840 131 aaKnown RBP12.77□□□□□ -0.36
PCDH8P1-201ENST00000428983 SPINK8P0C7L1 97 aa12.77□□□□□ -0.37
PCDH8P1-201ENST00000428983 SRD5A1P18405 259 aa12.77□□□□□ -0.37
PCDH8P1-201ENST00000428983 SRSF9Q13242 221 aaKnown RBP eCLIP12.77□□□□□ -0.37
PCDH8P1-201ENST00000428983 C8orf86Q6ZUL3 223 aa12.77□□□□□ -0.37
PCDH8P1-201ENST00000428983 RASL10AQ92737 203 aa12.77□□□□□ -0.37
PCDH8P1-201ENST00000428983 TSPAN13O95857 204 aa12.76□□□□□ -0.37
PCDH8P1-201ENST00000428983 C14orf178Q8N769 122 aaPredicted RBP12.76□□□□□ -0.37
PCDH8P1-201ENST00000428983 USP24Q9UPU5 2620 aa12.76□□□□□ -0.37
PCDH8P1-201ENST00000428983 EPG5Q9HCE0 2579 aa12.76□□□□□ -0.37
PCDH8P1-201ENST00000428983 BAALCQ8WXS3 180 aa12.76□□□□□ -0.37
PCDH8P1-201ENST00000428983 TRAV12-1A0A0B4J245 112 aa12.75□□□□□ -0.37
PCDH8P1-201ENST00000428983 AVPP01185 164 aa12.75□□□□□ -0.37
PCDH8P1-201ENST00000428983 XGP55808 180 aa12.75□□□□□ -0.37
PCDH8P1-201ENST00000428983 MRAP2Q96G30 205 aa12.75□□□□□ -0.37
PCDH8P1-201ENST00000428983 TRAV41A0A0B4J266 112 aa12.75□□□□□ -0.37
PCDH8P1-201ENST00000428983 H3BUX3 64 aa12.75□□□□□ -0.37
PCDH8P1-201ENST00000428983 SUMO2P61956 95 aaKnown RBP12.75□□□□□ -0.37
PCDH8P1-201ENST00000428983 DLX4Q92988 240 aaPredicted RBP12.75□□□□□ -0.37
PCDH8P1-201ENST00000428983 CCL19Q99731 98 aa12.75□□□□□ -0.37
PCDH8P1-201ENST00000428983 ATP5J2P56134 94 aa12.75□□□□□ -0.37
PCDH8P1-201ENST00000428983 RPL11P62913 178 aaKnown RBP12.75□□□□□ -0.37
PCDH8P1-201ENST00000428983 TCTEX1D4Q5JR98 221 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms