RNA–Protein interactions for RNA: ENST00000428599.6

CTNND1-208, Transcript of catenin delta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNND1, Length 6,016 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-208ENST00000428599 IGHG2P01859 326 aa7.02□□□□□ -1.29
CTNND1-208ENST00000428599 MYCNOSP40205 109 aa7.02□□□□□ -1.29
CTNND1-208ENST00000428599 DYNAPQ8N1N2 210 aa7.02□□□□□ -1.29
CTNND1-208ENST00000428599 VSIG2Q96IQ7 327 aa7.02□□□□□ -1.29
CTNND1-208ENST00000428599 A0A1B0GX51 115 aa7.02□□□□□ -1.29
CTNND1-208ENST00000428599 A8MWP6 167 aa7.02□□□□□ -1.29
CTNND1-208ENST00000428599 C9JQL5 133 aa7.02□□□□□ -1.29
CTNND1-208ENST00000428599 LTAP01374 205 aa7.02□□□□□ -1.29
CTNND1-208ENST00000428599 IGHV2-70P01814 119 aa7.02□□□□□ -1.29
CTNND1-208ENST00000428599 RSPO1Q2MKA7 263 aaPredicted RBP7.02□□□□□ -1.29
CTNND1-208ENST00000428599 C14orf177Q52M58 125 aa7.02□□□□□ -1.29
CTNND1-208ENST00000428599 B9D2Q9BPU9 175 aa7.02□□□□□ -1.29
CTNND1-208ENST00000428599 F6UB75 175 aa7.01□□□□□ -1.29
CTNND1-208ENST00000428599 BAALC-AS2P0C853 105 aa7.01□□□□□ -1.29
CTNND1-208ENST00000428599 GPHB5Q86YW7 130 aa7.01□□□□□ -1.29
CTNND1-208ENST00000428599 BAALCQ8WXS3 180 aa7.01□□□□□ -1.29
CTNND1-208ENST00000428599 SMIM27A0A1W2PRY6 76 aa7.01□□□□□ -1.29
CTNND1-208ENST00000428599 CRYBA4P53673 196 aa7.01□□□□□ -1.29
CTNND1-208ENST00000428599 AMTNQ6UX39 209 aa7.01□□□□□ -1.29
CTNND1-208ENST00000428599 HIST2H2BCQ6DN03 193 aa7.01□□□□□ -1.29
CTNND1-208ENST00000428599 PRSS47A8MTI9 375 aa7.01□□□□□ -1.29
CTNND1-208ENST00000428599 NDUFS7O75251 213 aa7.01□□□□□ -1.29
CTNND1-208ENST00000428599 SPANXCQ9NY87 97 aa7□□□□□ -1.29
CTNND1-208ENST00000428599 CADP27708 2225 aa7□□□□□ -1.29
CTNND1-208ENST00000428599 IGHV4-30-2A0A087WSY4 118 aa7□□□□□ -1.29
CTNND1-208ENST00000428599 COX7B2Q8TF08 81 aa7□□□□□ -1.29
CTNND1-208ENST00000428599 RNF138Q8WVD3 245 aa7□□□□□ -1.29
CTNND1-208ENST00000428599 DOPEY2Q9Y3R5 2298 aa7□□□□□ -1.29
CTNND1-208ENST00000428599 IGHV4-61A0A0C4DH41 118 aa7□□□□□ -1.29
CTNND1-208ENST00000428599 CENPVL3A0A0U1RRI6 287 aa7□□□□□ -1.29
CTNND1-208ENST00000428599 NDUFC2O95298 119 aa7□□□□□ -1.29
CTNND1-208ENST00000428599 RNF183Q96D59 192 aa7□□□□□ -1.29
CTNND1-208ENST00000428599 OPRPNQ99935 248 aaPredicted RBP7□□□□□ -1.29
CTNND1-208ENST00000428599 C14orf132Q9NPU4 83 aa7□□□□□ -1.29
CTNND1-208ENST00000428599 C15orf65H3BRN8 121 aa7□□□□□ -1.29
CTNND1-208ENST00000428599 IL15RAQ13261 267 aa7□□□□□ -1.29
CTNND1-208ENST00000428599 NREPQ16612 68 aa7□□□□□ -1.29
CTNND1-208ENST00000428599 ZNF491Q8N8L2 437 aa7□□□□□ -1.29
CTNND1-208ENST00000428599 CYYR1Q96J86 154 aa7□□□□□ -1.29
CTNND1-208ENST00000428599 H0YGX0 51 aa6.99□□□□□ -1.29
CTNND1-208ENST00000428599 COX8AP10176 69 aa6.99□□□□□ -1.29
CTNND1-208ENST00000428599 DIAPH2-AS1Q14236 149 aa6.99□□□□□ -1.29
CTNND1-208ENST00000428599 IGHV4-38-2P0DP08 117 aa6.99□□□□□ -1.29
CTNND1-208ENST00000428599 HHLA3Q9XRX5 114 aa6.99□□□□□ -1.29
CTNND1-208ENST00000428599 FXYD5Q96DB9 178 aa6.99□□□□□ -1.29
CTNND1-208ENST00000428599 SVIPQ8NHG7 77 aa6.99□□□□□ -1.29
CTNND1-208ENST00000428599 C1orf147Q96MC9 270 aaPredicted RBP6.99□□□□□ -1.29
CTNND1-208ENST00000428599 ESM1Q9NQ30 184 aa6.99□□□□□ -1.29
CTNND1-208ENST00000428599 COL4A4P53420 1690 aaPredicted RBP6.98□□□□□ -1.29
CTNND1-208ENST00000428599 IGLC2P0DOY2 106 aa6.98□□□□□ -1.29
CTNND1-208ENST00000428599 IGLC3P0DOY3 106 aa6.98□□□□□ -1.29
CTNND1-208ENST00000428599 CXCL5P42830 114 aa6.98□□□□□ -1.29
CTNND1-208ENST00000428599 LINC01545Q5VT33 79 aa6.98□□□□□ -1.29
CTNND1-208ENST00000428599 AGPAT4-IT1Q9H0P7 198 aa6.98□□□□□ -1.29
CTNND1-208ENST00000428599 V9GYV3 84 aa6.98□□□□□ -1.29
CTNND1-208ENST00000428599 CFC1BP0CG36 223 aa6.98□□□□□ -1.29
CTNND1-208ENST00000428599 CFC1P0CG37 223 aa6.98□□□□□ -1.29
CTNND1-208ENST00000428599 NPBQ8NG41 125 aa6.98□□□□□ -1.29
CTNND1-208ENST00000428599 PROP1O75360 226 aa6.98□□□□□ -1.29
CTNND1-208ENST00000428599 INSL3P51460 131 aa6.98□□□□□ -1.29
CTNND1-208ENST00000428599 SPRY4Q9C004 299 aa6.98□□□□□ -1.29
CTNND1-208ENST00000428599 SND1-IT1Q9HBX3 110 aa6.98□□□□□ -1.29
CTNND1-208ENST00000428599 COL4A3Q01955 1670 aa6.98□□□□□ -1.29
CTNND1-208ENST00000428599 K7EP34 96 aa6.97□□□□□ -1.29
CTNND1-208ENST00000428599 SEM1Q6ZVN7 128 aa6.97□□□□□ -1.29
CTNND1-208ENST00000428599 AJUBAQ96IF1 538 aa6.97□□□□□ -1.29
CTNND1-208ENST00000428599 NCR3O14931 201 aa6.97□□□□□ -1.29
CTNND1-208ENST00000428599 ACYP1P07311 99 aa6.97□□□□□ -1.29
CTNND1-208ENST00000428599 ADORA2A-AS1P86434 159 aa6.97□□□□□ -1.29
CTNND1-208ENST00000428599 DEFB135Q30KP9 77 aa6.97□□□□□ -1.29
CTNND1-208ENST00000428599 C10orf105Q8TEF2 133 aa6.97□□□□□ -1.29
CTNND1-208ENST00000428599 ZFP2Q6ZN57 461 aa6.97□□□□□ -1.29
CTNND1-208ENST00000428599 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.97□□□□□ -1.299e-7■■■□□ 18
CTNND1-208ENST00000428599 SIVA1O15304 175 aa6.97□□□□□ -1.29
CTNND1-208ENST00000428599 ZNF664Q8N3J9 261 aa6.97□□□□□ -1.29
CTNND1-208ENST00000428599 C4orf3Q8WVX3 66 aa6.97□□□□□ -1.29
CTNND1-208ENST00000428599 H0Y9J4 135 aa6.97□□□□□ -1.29
CTNND1-208ENST00000428599 KIR2DL5BQ8NHK3 375 aa6.96□□□□□ -1.29
CTNND1-208ENST00000428599 C11orf52Q96A22 123 aa6.96□□□□□ -1.29
CTNND1-208ENST00000428599 C20orf144Q9BQM9 153 aa6.96□□□□□ -1.29
CTNND1-208ENST00000428599 POLR3KQ9Y2Y1 108 aaPredicted RBP6.96□□□□□ -1.29
CTNND1-208ENST00000428599 DOCK10Q96BY6 2186 aa6.96□□□□□ -1.3
CTNND1-208ENST00000428599 OBSL1O75147 1896 aa6.96□□□□□ -1.3
CTNND1-208ENST00000428599 FAM208BQ5VWN6 2430 aa6.96□□□□□ -1.3
CTNND1-208ENST00000428599 IGHV4OR15-8A0A075B7B6 117 aa6.96□□□□□ -1.3
CTNND1-208ENST00000428599 A0A087WW49 117 aa6.96□□□□□ -1.3
CTNND1-208ENST00000428599 RS1O15537 224 aa6.96□□□□□ -1.3
CTNND1-208ENST00000428599 IGLV3-1P01715 115 aa6.96□□□□□ -1.3
CTNND1-208ENST00000428599 POU2AF1Q16633 256 aa6.96□□□□□ -1.3
CTNND1-208ENST00000428599 ETDBQ3ZM63 59 aa6.96□□□□□ -1.3
CTNND1-208ENST00000428599 A0A1W2PPM0 123 aa6.96□□□□□ -1.3
CTNND1-208ENST00000428599 NTN5Q8WTR8 489 aaPredicted RBP6.96□□□□□ -1.3
CTNND1-208ENST00000428599 PRR20EP86478 221 aa6.95□□□□□ -1.3
CTNND1-208ENST00000428599 PRR20CP86479 221 aa6.95□□□□□ -1.3
CTNND1-208ENST00000428599 PRR20DP86480 221 aa6.95□□□□□ -1.3
CTNND1-208ENST00000428599 PRR20BP86481 221 aa6.95□□□□□ -1.3
CTNND1-208ENST00000428599 PRR20AP86496 221 aa6.95□□□□□ -1.3
CTNND1-208ENST00000428599 PYY3Q5JQD4 70 aa6.95□□□□□ -1.3
CTNND1-208ENST00000428599 C11orf45Q8TAV5 145 aa6.95□□□□□ -1.3
CTNND1-208ENST00000428599 DIRC1Q969H9 104 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms