RNA–Protein interactions for RNA: ENST00000428445.1

VARS-216, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 863 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-216ENST00000428445 MGST1P10620 155 aaKnown RBP10.97□□□□□ -0.65
VARS-216ENST00000428445 RAB2AP61019 212 aa10.97□□□□□ -0.65
VARS-216ENST00000428445 SAPCD1Q5SSQ6 148 aa10.97□□□□□ -0.65
VARS-216ENST00000428445 LELP1Q5T871 98 aa10.97□□□□□ -0.65
VARS-216ENST00000428445 PSMG3Q9BT73 122 aaPredicted RBP10.97□□□□□ -0.65
VARS-216ENST00000428445 Q9UF83 564 aa10.97□□□□□ -0.65
VARS-216ENST00000428445 A6NHS1 94 aa10.96□□□□□ -0.65
VARS-216ENST00000428445 ARL14EPLP0DKL9 152 aa10.96□□□□□ -0.65
VARS-216ENST00000428445 CDC34P49427 236 aaPredicted RBP10.96□□□□□ -0.65
VARS-216ENST00000428445 SMUG1Q53HV7 270 aa10.96□□□□□ -0.65
VARS-216ENST00000428445 GTSF1LQ9H1H1 148 aa10.96□□□□□ -0.65
VARS-216ENST00000428445 TMEM167BQ9NRX6 74 aa10.96□□□□□ -0.65
VARS-216ENST00000428445 LRP1Q07954 4544 aaKnown RBP10.96□□□□□ -0.66
VARS-216ENST00000428445 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.95□□□□□ -0.66
VARS-216ENST00000428445 C1QBP02746 253 aa10.95□□□□□ -0.66
VARS-216ENST00000428445 LAGE3Q14657 143 aa10.95□□□□□ -0.66
VARS-216ENST00000428445 ZFP69Q49AA0 526 aa10.95□□□□□ -0.66
VARS-216ENST00000428445 ATP6V0E2Q8NHE4 81 aa10.95□□□□□ -0.66
VARS-216ENST00000428445 RAB24Q969Q5 203 aa10.95□□□□□ -0.66
VARS-216ENST00000428445 C9orf85Q96MD7 179 aa10.95□□□□□ -0.66
VARS-216ENST00000428445 TM2D2Q9BX73 214 aa10.95□□□□□ -0.66
VARS-216ENST00000428445 EPDR1Q9UM22 224 aa10.95□□□□□ -0.66
VARS-216ENST00000428445 PSG8Q9UQ74 426 aa10.95□□□□□ -0.66
VARS-216ENST00000428445 CXorf1O96002 111 aa10.94□□□□□ -0.66
VARS-216ENST00000428445 GCGP01275 180 aa10.94□□□□□ -0.66
VARS-216ENST00000428445 GCHFRP30047 84 aa10.94□□□□□ -0.66
VARS-216ENST00000428445 SUMO1P63165 101 aaKnown RBP10.94□□□□□ -0.66
VARS-216ENST00000428445 FLI1Q01543 452 aaPredicted RBP10.94□□□□□ -0.66
VARS-216ENST00000428445 ZNF506Q5JVG8 444 aa10.94□□□□□ -0.66
VARS-216ENST00000428445 ZFP2Q6ZN57 461 aa10.94□□□□□ -0.66
VARS-216ENST00000428445 DAZ4Q86SG3 579 aaKnown RBP10.94□□□□□ -0.66
VARS-216ENST00000428445 LINC00528Q8N1L1 170 aa10.94□□□□□ -0.66
VARS-216ENST00000428445 DNAJC30Q96LL9 226 aa10.94□□□□□ -0.66
VARS-216ENST00000428445 DAZ3Q9NR90 486 aaKnown RBP10.94□□□□□ -0.66
VARS-216ENST00000428445 TNFSF18Q9UNG2 199 aa10.94□□□□□ -0.66
VARS-216ENST00000428445 GAGE12JA6NER3 117 aa10.93□□□□□ -0.66
VARS-216ENST00000428445 GAGE1Q13065 139 aa10.93□□□□□ -0.66
VARS-216ENST00000428445 GAGE4Q13068 117 aa10.93□□□□□ -0.66
VARS-216ENST00000428445 GAGE5Q13069 117 aa10.93□□□□□ -0.66
VARS-216ENST00000428445 GAGE13Q4V321 117 aa10.93□□□□□ -0.66
VARS-216ENST00000428445 CYB561D1Q8N8Q1 229 aa10.93□□□□□ -0.66
VARS-216ENST00000428445 BAALCQ8WXS3 180 aa10.93□□□□□ -0.66
VARS-216ENST00000428445 AQP10Q96PS8 301 aa10.93□□□□□ -0.66
VARS-216ENST00000428445 A0A1W2PRE2 83 aa10.92□□□□□ -0.66
VARS-216ENST00000428445 A8MWV9 139 aa10.92□□□□□ -0.66
VARS-216ENST00000428445 IGLV2-11P01706 119 aa10.92□□□□□ -0.66
VARS-216ENST00000428445 RNASE3P12724 160 aaKnown RBP10.92□□□□□ -0.66
VARS-216ENST00000428445 Q6ZSA8 131 aa10.92□□□□□ -0.66
VARS-216ENST00000428445 ACTR3CQ9C0K3 210 aaPredicted RBP10.92□□□□□ -0.66
VARS-216ENST00000428445 JPT2Q9H910 190 aa10.92□□□□□ -0.66
VARS-216ENST00000428445 TRAV8-3A0A0A6YYJ7 113 aa10.91□□□□□ -0.66
VARS-216ENST00000428445 FABP5P3A8MUU1 101 aa10.91□□□□□ -0.66
VARS-216ENST00000428445 ATP6V0CP27449 155 aa10.91□□□□□ -0.66
VARS-216ENST00000428445 PRNTQ86SH4 94 aa10.91□□□□□ -0.66
VARS-216ENST00000428445 HSD17B11Q8NBQ5 300 aa10.91□□□□□ -0.66
VARS-216ENST00000428445 OR2T35Q8NGX2 323 aa10.91□□□□□ -0.66
VARS-216ENST00000428445 SAMD10Q9BYL1 202 aa10.91□□□□□ -0.66
VARS-216ENST00000428445 NKX6-2Q9C056 277 aaPredicted RBP10.91□□□□□ -0.66
VARS-216ENST00000428445 FAT3Q8TDW7 4589 aa10.91□□□□□ -0.66
VARS-216ENST00000428445 A0A087WWC5 75 aa10.9□□□□□ -0.66
VARS-216ENST00000428445 PLA2G1BP04054 148 aaKnown RBP10.9□□□□□ -0.66
VARS-216ENST00000428445 FGF8P55075 233 aaPredicted RBP10.9□□□□□ -0.66
VARS-216ENST00000428445 TOR2AQ5JU69 321 aa10.9□□□□□ -0.66
VARS-216ENST00000428445 COX11Q9Y6N1 276 aa10.9□□□□□ -0.66
VARS-216ENST00000428445 KRTAP29-1A8MX34 341 aaPredicted RBP10.89□□□□□ -0.67
VARS-216ENST00000428445 S100A4P26447 101 aaKnown RBP10.89□□□□□ -0.67
VARS-216ENST00000428445 C14orf178Q8N769 122 aaPredicted RBP10.89□□□□□ -0.67
VARS-216ENST00000428445 LINC00479Q96M42 142 aa10.89□□□□□ -0.67
VARS-216ENST00000428445 PARLQ9H300 379 aa10.89□□□□□ -0.67
VARS-216ENST00000428445 IGKV3D-20A0A0C4DH25 116 aa10.88□□□□□ -0.67
VARS-216ENST00000428445 GGTLC3B5MD39 225 aa10.88□□□□□ -0.67
VARS-216ENST00000428445 SEC11BP0C7V7 166 aa10.88□□□□□ -0.67
VARS-216ENST00000428445 SCXQ7RTU7 201 aa10.88□□□□□ -0.67
VARS-216ENST00000428445 IL36BQ9NZH7 164 aa10.88□□□□□ -0.67
VARS-216ENST00000428445 TRAV34A0A0B4J273 112 aa10.87□□□□□ -0.67
VARS-216ENST00000428445 LINC00694P0DN24 101 aa10.87□□□□□ -0.67
VARS-216ENST00000428445 LGALSLQ3ZCW2 172 aaPredicted RBP10.87□□□□□ -0.67
VARS-216ENST00000428445 DNLZQ5SXM8 178 aa10.87□□□□□ -0.67
VARS-216ENST00000428445 HIST1H2BAQ96A08 127 aa10.87□□□□□ -0.67
VARS-216ENST00000428445 ALG5Q9Y673 324 aa10.87□□□□□ -0.67
VARS-216ENST00000428445 ASIPP42127 132 aa10.86□□□□□ -0.67
VARS-216ENST00000428445 COX8CQ7Z4L0 72 aa10.86□□□□□ -0.67
VARS-216ENST00000428445 INO80EQ8NBZ0 244 aaPredicted RBP10.86□□□□□ -0.67
VARS-216ENST00000428445 DEFB104AQ8WTQ1 72 aa10.86□□□□□ -0.67
VARS-216ENST00000428445 MED28Q9H204 178 aa10.86□□□□□ -0.67
VARS-216ENST00000428445 ZFP30Q9Y2G7 519 aa10.86□□□□□ -0.67
VARS-216ENST00000428445 PKHD1L1Q86WI1 4243 aa10.85□□□□□ -0.67
VARS-216ENST00000428445 BORCS7-ASMTA0A0B4J1R7 106 aa10.85□□□□□ -0.67
VARS-216ENST00000428445 RBFOX3A6NFN3 312 aa10.85□□□□□ -0.67
VARS-216ENST00000428445 RHODO00212 210 aa10.85□□□□□ -0.67
VARS-216ENST00000428445 KRTAP10-4P60372 401 aaPredicted RBP10.85□□□□□ -0.67
VARS-216ENST00000428445 UFSP1Q6NVU6 142 aa10.85□□□□□ -0.67
VARS-216ENST00000428445 ARL2-SNX15V9GYD0 113 aa10.85□□□□□ -0.67
VARS-216ENST00000428445 HMCN2Q8NDA2 5059 aa10.85□□□□□ -0.67
VARS-216ENST00000428445 CTXND1A0A1B0GTU2 59 aa10.84□□□□□ -0.67
VARS-216ENST00000428445 IFNA7P01567 189 aa10.84□□□□□ -0.67
VARS-216ENST00000428445 DMRTA1Q5VZB9 504 aa10.84□□□□□ -0.67
VARS-216ENST00000428445 SYT8Q8NBV8 401 aa10.84□□□□□ -0.67
VARS-216ENST00000428445 RMI2Q96E14 147 aa10.84□□□□□ -0.67
VARS-216ENST00000428445 KLK12Q9UKR0 248 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms