RNA–Protein interactions for RNA: ENST00000428313.5

C9orf3-206, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-206ENST00000428313 LOXP28300 417 aaPredicted RBP12.23□□□□□ -0.45
C9orf3-206ENST00000428313 C14orf178Q8N769 122 aaPredicted RBP12.23□□□□□ -0.45
C9orf3-206ENST00000428313 OR13C6PQ8NH95 151 aa12.23□□□□□ -0.45
C9orf3-206ENST00000428313 IGFBPL1Q8WX77 278 aa12.23□□□□□ -0.45
C9orf3-206ENST00000428313 DPH3P1Q9H4G8 78 aa12.23□□□□□ -0.45
C9orf3-206ENST00000428313 FRYLO94915 3013 aa12.23□□□□□ -0.45
C9orf3-206ENST00000428313 IGIPA6NJ69 53 aa12.23□□□□□ -0.45
C9orf3-206ENST00000428313 F8W735 103 aaPredicted RBP12.23□□□□□ -0.45
C9orf3-206ENST00000428313 ASCL5Q7RTU5 278 aa12.23□□□□□ -0.45
C9orf3-206ENST00000428313 MUSTN1Q8IVN3 82 aa12.23□□□□□ -0.45
C9orf3-206ENST00000428313 RPL39LQ96EH5 51 aaKnown RBP12.23□□□□□ -0.45
C9orf3-206ENST00000428313 METTL26Q96S19 204 aa12.22□□□□□ -0.45
C9orf3-206ENST00000428313 CITED2Q99967 270 aaPredicted RBP12.22□□□□□ -0.45
C9orf3-206ENST00000428313 VPS13AQ96RL7 3174 aa12.22□□□□□ -0.45
C9orf3-206ENST00000428313 A0A0J9YX75 114 aa12.22□□□□□ -0.45
C9orf3-206ENST00000428313 C17orf100A8MU93 164 aa12.22□□□□□ -0.45
C9orf3-206ENST00000428313 LEPROTO15243 131 aa12.22□□□□□ -0.45
C9orf3-206ENST00000428313 IGLV1-47P01700 117 aa12.22□□□□□ -0.45
C9orf3-206ENST00000428313 IGF2-ASQ6U949 168 aa12.22□□□□□ -0.45
C9orf3-206ENST00000428313 TMEM219Q86XT9 240 aa12.22□□□□□ -0.45
C9orf3-206ENST00000428313 TIMM17AQ99595 171 aa12.22□□□□□ -0.45
C9orf3-206ENST00000428313 AGPAT4-IT1Q9H0P7 198 aa12.22□□□□□ -0.45
C9orf3-206ENST00000428313 IGLV11-55A0A075B6I3 123 aa12.21□□□□□ -0.45
C9orf3-206ENST00000428313 TMEM105Q8N8V8 129 aa12.21□□□□□ -0.45
C9orf3-206ENST00000428313 MSRB2Q9Y3D2 182 aa12.21□□□□□ -0.45
C9orf3-206ENST00000428313 DUX3Q96PT4 197 aa12.21□□□□□ -0.46
C9orf3-206ENST00000428313 S4R3C0 116 aa12.21□□□□□ -0.46
C9orf3-206ENST00000428313 CADP27708 2225 aa12.2□□□□□ -0.46
C9orf3-206ENST00000428313 A0A0G2JNJ9 132 aa12.2□□□□□ -0.46
C9orf3-206ENST00000428313 TMEM223A0PJW6 202 aa12.2□□□□□ -0.46
C9orf3-206ENST00000428313 ZNF876PQ49A33 203 aa12.2□□□□□ -0.46
C9orf3-206ENST00000428313 PRSS33Q8NF86 280 aa12.2□□□□□ -0.46
C9orf3-206ENST00000428313 Q9UFV3 132 aa12.2□□□□□ -0.46
C9orf3-206ENST00000428313 SDHAF1A6NFY7 115 aa12.2□□□□□ -0.46
C9orf3-206ENST00000428313 BUB1B-PAK6H3BSN5 160 aa12.2□□□□□ -0.46
C9orf3-206ENST00000428313 COX6CP09669 75 aa12.2□□□□□ -0.46
C9orf3-206ENST00000428313 DLX1P56177 255 aa12.2□□□□□ -0.46
C9orf3-206ENST00000428313 ZNRF2Q8NHG8 242 aa12.2□□□□□ -0.46
C9orf3-206ENST00000428313 MRPL53Q96EL3 112 aaKnown RBP12.2□□□□□ -0.46
C9orf3-206ENST00000428313 FANCD2OSQ96PS1 177 aa12.2□□□□□ -0.46
C9orf3-206ENST00000428313 TP53TG1Q9Y2A0 90 aa12.2□□□□□ -0.46
C9orf3-206ENST00000428313 ICOSQ9Y6W8 199 aa12.2□□□□□ -0.46
C9orf3-206ENST00000428313 ZNF318Q5VUA4 2279 aa12.19□□□□□ -0.46
C9orf3-206ENST00000428313 CCL8P80075 99 aa12.19□□□□□ -0.46
C9orf3-206ENST00000428313 BEX4Q9NWD9 120 aaPredicted RBP12.19□□□□□ -0.46
C9orf3-206ENST00000428313 TMEM178BH3BS89 294 aa12.18□□□□□ -0.46
C9orf3-206ENST00000428313 LYPD2Q6UXB3 125 aa12.18□□□□□ -0.46
C9orf3-206ENST00000428313 UBTD1Q9HAC8 227 aa12.18□□□□□ -0.46
C9orf3-206ENST00000428313 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.18□□□□□ -0.46
C9orf3-206ENST00000428313 LST1O00453 97 aa12.17□□□□□ -0.46
C9orf3-206ENST00000428313 PF4V1P10720 104 aa12.17□□□□□ -0.46
C9orf3-206ENST00000428313 C9orf47Q6ZRZ4 202 aa12.17□□□□□ -0.46
C9orf3-206ENST00000428313 LINC00643Q86TS7 51 aa12.17□□□□□ -0.46
C9orf3-206ENST00000428313 KAAG1Q9UBP8 84 aa12.17□□□□□ -0.46
C9orf3-206ENST00000428313 COX7CP15954 63 aa12.17□□□□□ -0.46
C9orf3-206ENST00000428313 CEMP1Q6PRD7 247 aaPredicted RBP12.17□□□□□ -0.46
C9orf3-206ENST00000428313 GPHB5Q86YW7 130 aa12.17□□□□□ -0.46
C9orf3-206ENST00000428313 RNF182Q8N6D2 247 aa12.17□□□□□ -0.46
C9orf3-206ENST00000428313 TRAV17A0A0B4J275 112 aa12.16□□□□□ -0.46
C9orf3-206ENST00000428313 A0A1W2PNU3 283 aaPredicted RBP12.16□□□□□ -0.46
C9orf3-206ENST00000428313 CRYGAP11844 174 aa12.16□□□□□ -0.46
C9orf3-206ENST00000428313 ZNF22P17026 224 aaPredicted RBP12.16□□□□□ -0.46
C9orf3-206ENST00000428313 CXCL5P42830 114 aa12.16□□□□□ -0.46
C9orf3-206ENST00000428313 FREM2Q5SZK8 3169 aa12.16□□□□□ -0.46
C9orf3-206ENST00000428313 MED14OSP0DP75 135 aa12.16□□□□□ -0.46
C9orf3-206ENST00000428313 ZGRF1Q86YA3 2104 aa12.16□□□□□ -0.46
C9orf3-206ENST00000428313 ZNF256Q9Y2P7 627 aaPredicted RBP12.16□□□□□ -0.46
C9orf3-206ENST00000428313 LINC00527Q9UJ94 153 aa12.15□□□□□ -0.46
C9orf3-206ENST00000428313 NBR2O15453 112 aa12.14□□□□□ -0.47
C9orf3-206ENST00000428313 CTSGP08311 255 aa12.14□□□□□ -0.47
C9orf3-206ENST00000428313 MGPP08493 103 aa12.14□□□□□ -0.47
C9orf3-206ENST00000428313 NUP37Q8NFH4 326 aa12.14□□□□□ -0.47
C9orf3-206ENST00000428313 UBE2E1P51965 193 aa12.14□□□□□ -0.47
C9orf3-206ENST00000428313 GAGE2AQ6NT46 116 aa12.14□□□□□ -0.47
C9orf3-206ENST00000428313 TRIOBPQ9H2D6 2365 aa12.13□□□□□ -0.47
C9orf3-206ENST00000428313 IGHV4OR15-8A0A075B7B6 117 aa12.13□□□□□ -0.47
C9orf3-206ENST00000428313 A0A087WW49 117 aa12.13□□□□□ -0.47
C9orf3-206ENST00000428313 LENEPQ9Y5L5 61 aa12.13□□□□□ -0.47
C9orf3-206ENST00000428313 AHCTF1Q8WYP5 2266 aa12.13□□□□□ -0.47
C9orf3-206ENST00000428313 ADIPOQQ15848 244 aa12.13□□□□□ -0.47
C9orf3-206ENST00000428313 SDIM1Q6ZPB5 146 aa12.13□□□□□ -0.47
C9orf3-206ENST00000428313 ZFAND3Q9H8U3 227 aa12.13□□□□□ -0.47
C9orf3-206ENST00000428313 KLK5Q9Y337 293 aaPredicted RBP12.13□□□□□ -0.47
C9orf3-206ENST00000428313 LY6LH3BQJ8 138 aa12.12□□□□□ -0.47
C9orf3-206ENST00000428313 BUB3O43684 328 aa12.12□□□□□ -0.47
C9orf3-206ENST00000428313 NPBQ8NG41 125 aa12.12□□□□□ -0.47
C9orf3-206ENST00000428313 ICE1Q9Y2F5 2266 aa12.12□□□□□ -0.47
C9orf3-206ENST00000428313 A0A0J9YXY3 114 aa12.12□□□□□ -0.47
C9orf3-206ENST00000428313 IGHV1-69P01742 117 aa12.12□□□□□ -0.47
C9orf3-206ENST00000428313 POLR2KP53803 58 aaKnown RBP12.12□□□□□ -0.47
C9orf3-206ENST00000428313 C5orf38Q86SI9 138 aa12.12□□□□□ -0.47
C9orf3-206ENST00000428313 EDA2RQ9HAV5 297 aa12.12□□□□□ -0.47
C9orf3-206ENST00000428313 PLCE1Q9P212 2302 aa12.11□□□□□ -0.47
C9orf3-206ENST00000428313 C2orf48Q96LS8 159 aa12.11□□□□□ -0.47
C9orf3-206ENST00000428313 PHLDA3Q9Y5J5 127 aa12.11□□□□□ -0.47
C9orf3-206ENST00000428313 MBD3L4A6NDZ8 208 aaPredicted RBP12.11□□□□□ -0.47
C9orf3-206ENST00000428313 MBD3L3A6NE82 208 aaPredicted RBP12.11□□□□□ -0.47
C9orf3-206ENST00000428313 MBD3L5A6NJ08 208 aaPredicted RBP12.11□□□□□ -0.47
C9orf3-206ENST00000428313 VCYO14598 125 aa12.11□□□□□ -0.47
C9orf3-206ENST00000428313 MBD3L2Q8NHZ7 208 aaPredicted RBP12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms