RNA–Protein interactions for RNA: ENST00000427724.6

TCOF1-204, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5

Gene TCOF1, Length 4,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-204ENST00000427724 IGLV1-47P01700 117 aa8.3□□□□□ -1.08
TCOF1-204ENST00000427724 HERVK_113P61574 105 aa8.3□□□□□ -1.08
TCOF1-204ENST00000427724 COL5A1P20908 1838 aaPredicted RBP8.3□□□□□ -1.08
TCOF1-204ENST00000427724 A0A1W2PPM0 123 aa8.29□□□□□ -1.08
TCOF1-204ENST00000427724 AMTNQ6UX39 209 aa8.29□□□□□ -1.08
TCOF1-204ENST00000427724 Q86TA4 180 aa8.29□□□□□ -1.08
TCOF1-204ENST00000427724 TMEM101Q96IK0 257 aa8.29□□□□□ -1.08
TCOF1-204ENST00000427724 PRADC1Q9BSG0 188 aa8.29□□□□□ -1.08
TCOF1-204ENST00000427724 IGLC1P0CG04 106 aa8.29□□□□□ -1.08
TCOF1-204ENST00000427724 Q6AWC8 147 aa8.29□□□□□ -1.08
TCOF1-204ENST00000427724 RNF182Q8N6D2 247 aa8.29□□□□□ -1.08
TCOF1-204ENST00000427724 RITA1Q96K30 269 aa8.29□□□□□ -1.08
TCOF1-204ENST00000427724 CYSLTR1Q9Y271 337 aa8.29□□□□□ -1.08
TCOF1-204ENST00000427724 GAGE7O76087 117 aa8.29□□□□□ -1.08
TCOF1-204ENST00000427724 GAGE12FP0CL80 117 aa8.29□□□□□ -1.08
TCOF1-204ENST00000427724 GAGE12GP0CL81 117 aa8.29□□□□□ -1.08
TCOF1-204ENST00000427724 GAGE12IP0CL82 117 aa8.29□□□□□ -1.08
TCOF1-204ENST00000427724 CTRLP40313 264 aa8.29□□□□□ -1.08
TCOF1-204ENST00000427724 ZC2HC1BQ5TFG8 222 aa8.29□□□□□ -1.08
TCOF1-204ENST00000427724 LYZL1Q6UWQ5 148 aa8.29□□□□□ -1.08
TCOF1-204ENST00000427724 C1orf229Q6ZS94 237 aaPredicted RBP8.29□□□□□ -1.08
TCOF1-204ENST00000427724 A6NDX4 124 aa8.29□□□□□ -1.08
TCOF1-204ENST00000427724 AMN1Q8IY45 258 aa8.29□□□□□ -1.08
TCOF1-204ENST00000427724 DSPP15924 2871 aaKnown RBP8.28□□□□□ -1.08
TCOF1-204ENST00000427724 TRAV12-2A0A075B6T6 113 aa8.28□□□□□ -1.08
TCOF1-204ENST00000427724 E7EUB6 86 aa8.28□□□□□ -1.08
TCOF1-204ENST00000427724 AVPP01185 164 aa8.28□□□□□ -1.08
TCOF1-204ENST00000427724 LINC01006Q8NI28 216 aa8.28□□□□□ -1.08
TCOF1-204ENST00000427724 CHAC1Q9BUX1 264 aa8.28□□□□□ -1.08
TCOF1-204ENST00000427724 TRAV8-2A0A0B4J237 113 aa8.28□□□□□ -1.08
TCOF1-204ENST00000427724 IGHV7-4-1A0A0J9YVY3 117 aa8.28□□□□□ -1.08
TCOF1-204ENST00000427724 H3BMG7 143 aa8.28□□□□□ -1.08
TCOF1-204ENST00000427724 IGHG2P01859 326 aa8.28□□□□□ -1.08
TCOF1-204ENST00000427724 FAM231DQ6ZW35 169 aa8.28□□□□□ -1.08
TCOF1-204ENST00000427724 DEFB104AQ8WTQ1 72 aa8.28□□□□□ -1.08
TCOF1-204ENST00000427724 DPM2O94777 84 aa8.28□□□□□ -1.08
TCOF1-204ENST00000427724 IGKCP01834 107 aa8.28□□□□□ -1.08
TCOF1-204ENST00000427724 SUMO2P61956 95 aaKnown RBP8.28□□□□□ -1.08
TCOF1-204ENST00000427724 CD300EQ496F6 205 aaPredicted RBP8.28□□□□□ -1.08
TCOF1-204ENST00000427724 TOMM7Q9P0U1 55 aa8.28□□□□□ -1.08
TCOF1-204ENST00000427724 NCKAP5O14513 1909 aa8.27□□□□□ -1.08
TCOF1-204ENST00000427724 A0A1B0GW15 77 aa8.27□□□□□ -1.09
TCOF1-204ENST00000427724 H3BUA1 57 aa8.27□□□□□ -1.09
TCOF1-204ENST00000427724 EIF4EBP1Q13541 118 aaPredicted RBP8.27□□□□□ -1.09
TCOF1-204ENST00000427724 SMPXQ9UHP9 88 aa8.27□□□□□ -1.09
TCOF1-204ENST00000427724 DMXL2Q8TDJ6 3036 aa8.27□□□□□ -1.09
TCOF1-204ENST00000427724 PATE2Q6UY27 113 aa8.27□□□□□ -1.09
TCOF1-204ENST00000427724 DEFB135Q30KP9 77 aa8.27□□□□□ -1.09
TCOF1-204ENST00000427724 SH2D6Q7Z4S9 175 aa8.27□□□□□ -1.09
TCOF1-204ENST00000427724 PRSS2P07478 247 aa8.26□□□□□ -1.09
TCOF1-204ENST00000427724 DYNAPQ8N1N2 210 aa8.26□□□□□ -1.09
TCOF1-204ENST00000427724 MRPL36Q9P0J6 103 aaKnown RBP8.26□□□□□ -1.09
TCOF1-204ENST00000427724 KLK9Q9UKQ9 250 aa8.26□□□□□ -1.09
TCOF1-204ENST00000427724 LINC01548A6NM66 108 aa8.26□□□□□ -1.09
TCOF1-204ENST00000427724 K7EMI3 77 aa8.26□□□□□ -1.09
TCOF1-204ENST00000427724 DEFB4AO15263 64 aa8.26□□□□□ -1.09
TCOF1-204ENST00000427724 PCP2Q8IVA1 136 aa8.26□□□□□ -1.09
TCOF1-204ENST00000427724 FAM167A-AS1Q96KT0 104 aa8.26□□□□□ -1.09
TCOF1-204ENST00000427724 LINC00477Q96M19 166 aa8.26□□□□□ -1.09
TCOF1-204ENST00000427724 SHANK2-AS3Q9BTD1 123 aa8.26□□□□□ -1.09
TCOF1-204ENST00000427724 STAB1Q9NY15 2570 aa8.26□□□□□ -1.09
TCOF1-204ENST00000427724 ATP5LO75964 103 aa8.26□□□□□ -1.09
TCOF1-204ENST00000427724 ZNF503Q96F45 646 aa8.26□□□□□ -1.09
TCOF1-204ENST00000427724 A0A096LPF7 62 aa8.26□□□□□ -1.09
TCOF1-204ENST00000427724 TMEM213A2RRL7 107 aa8.26□□□□□ -1.09
TCOF1-204ENST00000427724 LINC00310P59036 64 aa8.26□□□□□ -1.09
TCOF1-204ENST00000427724 NDUFA11Q86Y39 141 aa8.26□□□□□ -1.09
TCOF1-204ENST00000427724 C8orf31Q8N9H6 132 aa8.26□□□□□ -1.09
TCOF1-204ENST00000427724 ERCC8Q13216 396 aa8.25□□□□□ -1.09
TCOF1-204ENST00000427724 OXLD1Q5BKU9 147 aa8.25□□□□□ -1.09
TCOF1-204ENST00000427724 DLX4Q92988 240 aaPredicted RBP8.25□□□□□ -1.09
TCOF1-204ENST00000427724 SPAG8Q99932 426 aaPredicted RBP8.25□□□□□ -1.09
TCOF1-204ENST00000427724 C2orf70A6NJV1 201 aa8.25□□□□□ -1.09
TCOF1-204ENST00000427724 C17orf77Q96MU5 243 aa8.25□□□□□ -1.09
TCOF1-204ENST00000427724 FLNAP21333 2647 aaKnown RBP8.25□□□□□ -1.09
TCOF1-204ENST00000427724 SH2D1AO60880 128 aa8.25□□□□□ -1.09
TCOF1-204ENST00000427724 PRSS46E5RG02 174 aa8.24□□□□□ -1.09
TCOF1-204ENST00000427724 RNASE1P07998 156 aaKnown RBP8.24□□□□□ -1.09
TCOF1-204ENST00000427724 WIPF2Q8TF74 440 aaPredicted RBP8.24□□□□□ -1.09
TCOF1-204ENST00000427724 IGF2BP2-AS1Q96M15 143 aa8.24□□□□□ -1.09
TCOF1-204ENST00000427724 C8orf49Q96NF6 230 aa8.24□□□□□ -1.09
TCOF1-204ENST00000427724 SCRT2Q9NQ03 307 aa8.24□□□□□ -1.09
TCOF1-204ENST00000427724 ESM1Q9NQ30 184 aa8.24□□□□□ -1.09
TCOF1-204ENST00000427724 F6UB75 175 aa8.24□□□□□ -1.09
TCOF1-204ENST00000427724 G3V4G9 280 aa8.24□□□□□ -1.09
TCOF1-204ENST00000427724 RPL36AP83881 106 aaKnown RBP8.24□□□□□ -1.09
TCOF1-204ENST00000427724 THAP8Q8NA92 274 aa8.24□□□□□ -1.09
TCOF1-204ENST00000427724 RPL36ALQ969Q0 106 aaKnown RBP8.24□□□□□ -1.09
TCOF1-204ENST00000427724 DSCAML1Q8TD84 2053 aa8.24□□□□□ -1.09
TCOF1-204ENST00000427724 IGHV3-16A0A0C4DH30 117 aa8.24□□□□□ -1.09
TCOF1-204ENST00000427724 ZFAND6Q6FIF0 208 aa8.24□□□□□ -1.09
TCOF1-204ENST00000427724 C10orf99Q6UWK7 81 aa8.24□□□□□ -1.09
TCOF1-204ENST00000427724 LY6G5BQ8NDX9 201 aa8.24□□□□□ -1.09
TCOF1-204ENST00000427724 SCGB3A1Q96QR1 104 aa8.24□□□□□ -1.09
TCOF1-204ENST00000427724 ZNF747Q9BV97 191 aa8.24□□□□□ -1.09
TCOF1-204ENST00000427724 PGPEP1Q9NXJ5 209 aa8.24□□□□□ -1.09
TCOF1-204ENST00000427724 ZNF492Q9P255 531 aa8.24□□□□□ -1.09
TCOF1-204ENST00000427724 A0A0J9YY99 117 aa8.23□□□□□ -1.09
TCOF1-204ENST00000427724 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.23□□□□□ -1.09
TCOF1-204ENST00000427724 MALP21145 153 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms