RNA–Protein interactions for RNA: ENST00000427191.6

PTPN13-203, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,487 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-203ENST00000427191 COA6Q5JTJ3 125 aaKnown RBP11.41□□□□□ -0.58
PTPN13-203ENST00000427191 COX7B2Q8TF08 81 aa11.41□□□□□ -0.58
PTPN13-203ENST00000427191 K7ERS5 55 aa11.41□□□□□ -0.58
PTPN13-203ENST00000427191 DKK2Q9UBU2 259 aa11.41□□□□□ -0.58
PTPN13-203ENST00000427191 RPL18AQ02543 176 aaKnown RBP11.41□□□□□ -0.58
PTPN13-203ENST00000427191 IGHV3-38A0A0C4DH36 116 aa11.41□□□□□ -0.58
PTPN13-203ENST00000427191 TM2D2Q9BX73 214 aa11.41□□□□□ -0.58
PTPN13-203ENST00000427191 TRAV12-2A0A075B6T6 113 aa11.41□□□□□ -0.58
PTPN13-203ENST00000427191 IGLL5B9A064 214 aa11.41□□□□□ -0.58
PTPN13-203ENST00000427191 C14orf132Q9NPU4 83 aa11.4□□□□□ -0.58
PTPN13-203ENST00000427191 TRAV4A0A0B4J268 109 aa11.4□□□□□ -0.58
PTPN13-203ENST00000427191 WT1-ASQ06250 92 aa11.4□□□□□ -0.58
PTPN13-203ENST00000427191 CAMK2N2Q96S95 79 aa11.4□□□□□ -0.58
PTPN13-203ENST00000427191 LYPD6BQ8NI32 183 aa11.4□□□□□ -0.58
PTPN13-203ENST00000427191 A0A1B0GUS0 222 aa11.4□□□□□ -0.59
PTPN13-203ENST00000427191 SP5Q6BEB4 398 aaPredicted RBP11.39□□□□□ -0.59
PTPN13-203ENST00000427191 J3QKU1 62 aa11.39□□□□□ -0.59
PTPN13-203ENST00000427191 DUX4L9Q6RFH8 374 aaPredicted RBP11.39□□□□□ -0.59
PTPN13-203ENST00000427191 SS18L2Q9UHA2 77 aa11.39□□□□□ -0.59
PTPN13-203ENST00000427191 ATP5EP56381 51 aaPredicted RBP11.39□□□□□ -0.59
PTPN13-203ENST00000427191 DEFB105AQ8NG35 78 aa11.39□□□□□ -0.59
PTPN13-203ENST00000427191 TANC1Q9C0D5 1861 aa11.39□□□□□ -0.59
PTPN13-203ENST00000427191 ZNF726P1Q15940 193 aa11.39□□□□□ -0.59
PTPN13-203ENST00000427191 MLANAQ16655 118 aa11.39□□□□□ -0.59
PTPN13-203ENST00000427191 VPREB3Q9UKI3 123 aa11.39□□□□□ -0.59
PTPN13-203ENST00000427191 AMTNQ6UX39 209 aa11.39□□□□□ -0.59
PTPN13-203ENST00000427191 MED14OSP0DP75 135 aa11.39□□□□□ -0.59
PTPN13-203ENST00000427191 NDUFA1O15239 70 aa11.38□□□□□ -0.59
PTPN13-203ENST00000427191 ATP5EP2Q5VTU8 51 aa11.38□□□□□ -0.59
PTPN13-203ENST00000427191 EML5Q05BV3 1969 aa11.38□□□□□ -0.59
PTPN13-203ENST00000427191 C15orf65H3BRN8 121 aa11.38□□□□□ -0.59
PTPN13-203ENST00000427191 NOP10Q9NPE3 64 aaKnown RBP11.38□□□□□ -0.59
PTPN13-203ENST00000427191 RUSC1-AS1Q66K80 236 aa11.38□□□□□ -0.59
PTPN13-203ENST00000427191 C9orf66Q5T8R8 295 aa11.38□□□□□ -0.59
PTPN13-203ENST00000427191 CCL18P55774 89 aa11.38□□□□□ -0.59
PTPN13-203ENST00000427191 RNF223E7ERA6 249 aa11.37□□□□□ -0.59
PTPN13-203ENST00000427191 KIAA1549Q9HCM3 1950 aa11.37□□□□□ -0.59
PTPN13-203ENST00000427191 CCL25O15444 150 aa11.37□□□□□ -0.59
PTPN13-203ENST00000427191 HIST2H2BCQ6DN03 193 aa11.37□□□□□ -0.59
PTPN13-203ENST00000427191 U3KQE9 123 aa11.37□□□□□ -0.59
PTPN13-203ENST00000427191 SVIPQ8NHG7 77 aa11.37□□□□□ -0.59
PTPN13-203ENST00000427191 V9GYY9 64 aa11.37□□□□□ -0.59
PTPN13-203ENST00000427191 G3V318 75 aa11.37□□□□□ -0.59
PTPN13-203ENST00000427191 PRR20EP86478 221 aa11.37□□□□□ -0.59
PTPN13-203ENST00000427191 PRR20CP86479 221 aa11.37□□□□□ -0.59
PTPN13-203ENST00000427191 PRR20DP86480 221 aa11.37□□□□□ -0.59
PTPN13-203ENST00000427191 PRR20BP86481 221 aa11.37□□□□□ -0.59
PTPN13-203ENST00000427191 PRR20AP86496 221 aa11.37□□□□□ -0.59
PTPN13-203ENST00000427191 ZNF491Q8N8L2 437 aa11.36□□□□□ -0.59
PTPN13-203ENST00000427191 LOXP28300 417 aaPredicted RBP11.36□□□□□ -0.59
PTPN13-203ENST00000427191 C9orf47Q6ZRZ4 202 aa11.36□□□□□ -0.59
PTPN13-203ENST00000427191 PRR15LQ9BU68 103 aa11.36□□□□□ -0.59
PTPN13-203ENST00000427191 SPART-AS1P0CW21 52 aa11.36□□□□□ -0.59
PTPN13-203ENST00000427191 KIR2DL5BQ8NHK3 375 aa11.36□□□□□ -0.59
PTPN13-203ENST00000427191 LGALS9O00182 355 aa11.36□□□□□ -0.59
PTPN13-203ENST00000427191 IGKV1OR2-108A0A075B7D4 117 aa11.35□□□□□ -0.59
PTPN13-203ENST00000427191 TIMM17AQ99595 171 aa11.35□□□□□ -0.59
PTPN13-203ENST00000427191 SPANXB1Q9NS25 103 aaPredicted RBP11.35□□□□□ -0.59
PTPN13-203ENST00000427191 IGLV1-44P01699 117 aa11.35□□□□□ -0.59
PTPN13-203ENST00000427191 NCOA6Q14686 2063 aaPredicted RBP11.35□□□□□ -0.59
PTPN13-203ENST00000427191 TRBV10-2A0A0K0K1G8 114 aa11.35□□□□□ -0.59
PTPN13-203ENST00000427191 TRBV12-3P01733 135 aa11.35□□□□□ -0.59
PTPN13-203ENST00000427191 Q8N1Y9 231 aa11.35□□□□□ -0.59
PTPN13-203ENST00000427191 ZNF106Q9H2Y7 1883 aaKnown RBP11.35□□□□□ -0.59
PTPN13-203ENST00000427191 PIFOQ8TCI5 191 aa11.35□□□□□ -0.59
PTPN13-203ENST00000427191 TRBV7-3A0A075B6L6 115 aa11.35□□□□□ -0.59
PTPN13-203ENST00000427191 IGHV1-58A0A0C4DH39 117 aa11.34□□□□□ -0.59
PTPN13-203ENST00000427191 IGLV3-9A0A075B6K5 115 aa11.34□□□□□ -0.59
PTPN13-203ENST00000427191 DIRC1Q969H9 104 aa11.34□□□□□ -0.59
PTPN13-203ENST00000427191 LINC00205P59089 165 aa11.34□□□□□ -0.59
PTPN13-203ENST00000427191 C11orf86A6NJI1 115 aa11.34□□□□□ -0.59
PTPN13-203ENST00000427191 UBE2AP49459 152 aa11.34□□□□□ -0.59
PTPN13-203ENST00000427191 C14orf177Q52M58 125 aa11.34□□□□□ -0.59
PTPN13-203ENST00000427191 TMEM61Q8N0U2 210 aa11.33□□□□□ -0.6
PTPN13-203ENST00000427191 K7ENP7 123 aa11.33□□□□□ -0.6
PTPN13-203ENST00000427191 CLPSL2Q6UWE3 100 aa11.33□□□□□ -0.6
PTPN13-203ENST00000427191 K7EN84 100 aa11.33□□□□□ -0.6
PTPN13-203ENST00000427191 MRPL55Q7Z7F7 128 aaKnown RBP11.33□□□□□ -0.6
PTPN13-203ENST00000427191 TOMM6Q96B49 74 aa11.33□□□□□ -0.6
PTPN13-203ENST00000427191 Q96MF0 132 aa11.33□□□□□ -0.6
PTPN13-203ENST00000427191 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.33□□□□□ -0.6
PTPN13-203ENST00000427191 IGKV2-29A2NJV5 120 aaPredicted RBP11.33□□□□□ -0.6
PTPN13-203ENST00000427191 KIAA1671Q9BY89 1806 aa11.33□□□□□ -0.6
PTPN13-203ENST00000427191 FOXI1Q12951 378 aa11.33□□□□□ -0.6
PTPN13-203ENST00000427191 PCP2Q8IVA1 136 aa11.33□□□□□ -0.6
PTPN13-203ENST00000427191 FAM120AOSQ5T036 256 aa11.32□□□□□ -0.6
PTPN13-203ENST00000427191 NPBQ8NG41 125 aa11.32□□□□□ -0.6
PTPN13-203ENST00000427191 CCL24O00175 119 aa11.32□□□□□ -0.6
PTPN13-203ENST00000427191 LINC00643Q86TS7 51 aa11.32□□□□□ -0.6
PTPN13-203ENST00000427191 A4D1N5 150 aa11.32□□□□□ -0.6
PTPN13-203ENST00000427191 GYPEP15421 78 aa11.32□□□□□ -0.6
PTPN13-203ENST00000427191 CRYGBP07316 175 aa11.32□□□□□ -0.6
PTPN13-203ENST00000427191 HOXB4P17483 251 aaPredicted RBP11.32□□□□□ -0.6
PTPN13-203ENST00000427191 E9PLD3 99 aa11.31□□□□□ -0.6
PTPN13-203ENST00000427191 FGF23Q9GZV9 251 aaPredicted RBP11.31□□□□□ -0.6
PTPN13-203ENST00000427191 NDUFC1O43677 76 aa11.3□□□□□ -0.6
PTPN13-203ENST00000427191 ZNF581Q9P0T4 197 aa11.3□□□□□ -0.6
PTPN13-203ENST00000427191 C1orf147Q96MC9 270 aaPredicted RBP11.3□□□□□ -0.6
PTPN13-203ENST00000427191 SORL1Q92673 2214 aa11.3□□□□□ -0.6
PTPN13-203ENST00000427191 RNASE13Q5GAN3 156 aaKnown RBP11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms