RNA–Protein interactions for RNA: ENST00000426878.2

LMCD1-204, Transcript of LIM and cysteine rich domains 1, humanhuman

TSL 2 BASIC

Gene LMCD1, Length 1,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-204ENST00000426878 C11orf52Q96A22 123 aa11.91□□□□□ -0.5
LMCD1-204ENST00000426878 IL36BQ9NZH7 164 aa11.91□□□□□ -0.5
LMCD1-204ENST00000426878 MRPS16Q9Y3D3 137 aaKnown RBP11.91□□□□□ -0.5
LMCD1-204ENST00000426878 PGPEP1LA6NFU8 196 aa11.9□□□□□ -0.5
LMCD1-204ENST00000426878 C9JCJ5 164 aa11.9□□□□□ -0.5
LMCD1-204ENST00000426878 RS1O15537 224 aa11.9□□□□□ -0.5
LMCD1-204ENST00000426878 S100A4P26447 101 aaKnown RBP11.9□□□□□ -0.5
LMCD1-204ENST00000426878 LINC01559Q495D7 138 aa11.9□□□□□ -0.5
LMCD1-204ENST00000426878 ZNF575Q86XF7 245 aa11.9□□□□□ -0.5
LMCD1-204ENST00000426878 HECTD4Q9Y4D8 3996 aa11.9□□□□□ -0.5
LMCD1-204ENST00000426878 NBDYA0A0U1RRE5 68 aa11.89□□□□□ -0.51
LMCD1-204ENST00000426878 GATA1P15976 413 aaPredicted RBP11.89□□□□□ -0.51
LMCD1-204ENST00000426878 ZNF506Q5JVG8 444 aa11.89□□□□□ -0.51
LMCD1-204ENST00000426878 CFAP126Q5VTH2 177 aa11.89□□□□□ -0.51
LMCD1-204ENST00000426878 BAGE2Q86Y30 109 aa11.89□□□□□ -0.51
LMCD1-204ENST00000426878 Q9H8V8 135 aa11.89□□□□□ -0.51
LMCD1-204ENST00000426878 IFNA1P01562 189 aa11.88□□□□□ -0.51
LMCD1-204ENST00000426878 BIRC6Q9NR09 4857 aa11.87□□□□□ -0.51
LMCD1-204ENST00000426878 K7EQD1 137 aa11.87□□□□□ -0.51
LMCD1-204ENST00000426878 RTL8CO15255 209 aa11.87□□□□□ -0.51
LMCD1-204ENST00000426878 TAGLN2P37802 199 aaKnown RBP11.87□□□□□ -0.51
LMCD1-204ENST00000426878 RPL35P42766 123 aaKnown RBP11.87□□□□□ -0.51
LMCD1-204ENST00000426878 MEF2BQ02080 365 aaPredicted RBP11.87□□□□□ -0.51
LMCD1-204ENST00000426878 NHLRC2Q8NBF2 726 aa11.87□□□□□ -0.51
LMCD1-204ENST00000426878 M0R036 132 aa11.86□□□□□ -0.51
LMCD1-204ENST00000426878 PDE6DO43924 150 aa11.86□□□□□ -0.51
LMCD1-204ENST00000426878 NEGR1Q7Z3B1 354 aa11.86□□□□□ -0.51
LMCD1-204ENST00000426878 SCRT2Q9NQ03 307 aa11.86□□□□□ -0.51
LMCD1-204ENST00000426878 A8MWV9 139 aa11.86□□□□□ -0.51
LMCD1-204ENST00000426878 ARMS2P0C7Q2 107 aa11.86□□□□□ -0.51
LMCD1-204ENST00000426878 BCL2P10415 239 aa11.86□□□□□ -0.51
LMCD1-204ENST00000426878 GYPEP15421 78 aa11.86□□□□□ -0.51
LMCD1-204ENST00000426878 SOHLH1Q5JUK2 328 aa11.86□□□□□ -0.51
LMCD1-204ENST00000426878 ZFP2Q6ZN57 461 aa11.86□□□□□ -0.51
LMCD1-204ENST00000426878 PCNPQ8WW12 178 aaKnown RBP11.86□□□□□ -0.51
LMCD1-204ENST00000426878 TRBV6-4A0A1B0GX49 114 aa11.85□□□□□ -0.51
LMCD1-204ENST00000426878 H3BVH4 76 aa11.85□□□□□ -0.51
LMCD1-204ENST00000426878 CXCL1P09341 107 aa11.85□□□□□ -0.51
LMCD1-204ENST00000426878 SRIP30626 198 aa11.85□□□□□ -0.51
LMCD1-204ENST00000426878 C1orf134Q5TEV5 83 aa11.85□□□□□ -0.51
LMCD1-204ENST00000426878 LYPD5Q6UWN5 251 aa11.85□□□□□ -0.51
LMCD1-204ENST00000426878 ALKAL2Q6UX46 152 aa11.85□□□□□ -0.51
LMCD1-204ENST00000426878 SH2D6Q7Z4S9 175 aa11.85□□□□□ -0.51
LMCD1-204ENST00000426878 DERL1Q9BUN8 251 aa11.85□□□□□ -0.51
LMCD1-204ENST00000426878 VAX2Q9UIW0 290 aa11.85□□□□□ -0.51
LMCD1-204ENST00000426878 A0A1W2PPQ1 181 aa11.84□□□□□ -0.51
LMCD1-204ENST00000426878 GRIFINA4D1Z8 144 aa11.84□□□□□ -0.51
LMCD1-204ENST00000426878 NKX2-5P52952 324 aaPredicted RBP11.84□□□□□ -0.51
LMCD1-204ENST00000426878 BLOC1S1P78537 153 aa11.84□□□□□ -0.51
LMCD1-204ENST00000426878 TTC32Q5I0X7 151 aa11.84□□□□□ -0.51
LMCD1-204ENST00000426878 DMRTA1Q5VZB9 504 aa11.84□□□□□ -0.51
LMCD1-204ENST00000426878 SLC25A29Q8N8R3 303 aa11.84□□□□□ -0.51
LMCD1-204ENST00000426878 SYT8Q8NBV8 401 aa11.84□□□□□ -0.51
LMCD1-204ENST00000426878 LYPD6BQ8NI32 183 aa11.84□□□□□ -0.51
LMCD1-204ENST00000426878 SMIM12Q96EX1 92 aa11.84□□□□□ -0.51
LMCD1-204ENST00000426878 MED14OSP0DP75 135 aa11.83□□□□□ -0.52
LMCD1-204ENST00000426878 MGST1P10620 155 aaKnown RBP11.83□□□□□ -0.52
LMCD1-204ENST00000426878 PARLQ9H300 379 aa11.83□□□□□ -0.52
LMCD1-204ENST00000426878 PHLDA3Q9Y5J5 127 aa11.83□□□□□ -0.52
LMCD1-204ENST00000426878 TMSB15BA0A087X1C1 80 aa11.82□□□□□ -0.52
LMCD1-204ENST00000426878 BTF3P20290 206 aaKnown RBP11.82□□□□□ -0.52
LMCD1-204ENST00000426878 RHOHQ15669 191 aa11.82□□□□□ -0.52
LMCD1-204ENST00000426878 CENPWQ5EE01 88 aa11.82□□□□□ -0.52
LMCD1-204ENST00000426878 UFSP1Q6NVU6 142 aa11.82□□□□□ -0.52
LMCD1-204ENST00000426878 PRADC1Q9BSG0 188 aa11.82□□□□□ -0.52
LMCD1-204ENST00000426878 LOC100131303A0A0U1RQF7 123 aa11.81□□□□□ -0.52
LMCD1-204ENST00000426878 PRSS29PA6NIE9 313 aa11.81□□□□□ -0.52
LMCD1-204ENST00000426878 SIVA1O15304 175 aa11.81□□□□□ -0.52
LMCD1-204ENST00000426878 IGLV2-8P01709 118 aa11.81□□□□□ -0.52
LMCD1-204ENST00000426878 TIRAPP58753 221 aa11.81□□□□□ -0.52
LMCD1-204ENST00000426878 MED9Q9NWA0 146 aa11.81□□□□□ -0.52
LMCD1-204ENST00000426878 BOLA1Q9Y3E2 137 aa11.81□□□□□ -0.52
LMCD1-204ENST00000426878 PKD1P98161 4303 aa11.81□□□□□ -0.52
LMCD1-204ENST00000426878 IGHV3-73A0A0B4J1V6 119 aa11.8□□□□□ -0.52
LMCD1-204ENST00000426878 NXPH4O95158 308 aa11.8□□□□□ -0.52
LMCD1-204ENST00000426878 RPL19P84098 196 aaKnown RBP11.8□□□□□ -0.52
LMCD1-204ENST00000426878 PRR27Q6MZM9 219 aa11.8□□□□□ -0.52
LMCD1-204ENST00000426878 ZFP82Q8N141 532 aa11.8□□□□□ -0.52
LMCD1-204ENST00000426878 C6orf223Q8N319 242 aa11.8□□□□□ -0.52
LMCD1-204ENST00000426878 SSBP4Q9BWG4 385 aaPredicted RBP11.8□□□□□ -0.52
LMCD1-204ENST00000426878 KRTAP1-5Q9BYS1 174 aa11.8□□□□□ -0.52
LMCD1-204ENST00000426878 JPT2Q9H910 190 aa11.8□□□□□ -0.52
LMCD1-204ENST00000426878 A0A1B0GVY2 172 aa11.79□□□□□ -0.52
LMCD1-204ENST00000426878 RAB19A4D1S5 217 aa11.79□□□□□ -0.52
LMCD1-204ENST00000426878 RHODO00212 210 aa11.79□□□□□ -0.52
LMCD1-204ENST00000426878 GNG4P50150 75 aa11.79□□□□□ -0.52
LMCD1-204ENST00000426878 SFRP2Q96HF1 295 aa11.79□□□□□ -0.52
LMCD1-204ENST00000426878 TRBV20OR9-2A0A075B6H5 130 aa11.78□□□□□ -0.52
LMCD1-204ENST00000426878 OR5AL1P0C617 328 aa11.78□□□□□ -0.52
LMCD1-204ENST00000426878 SAMD10Q9BYL1 202 aa11.78□□□□□ -0.52
LMCD1-204ENST00000426878 C19orf71A6NCJ1 209 aa11.77□□□□□ -0.52
LMCD1-204ENST00000426878 M0R381 172 aa11.77□□□□□ -0.52
LMCD1-204ENST00000426878 SNAI2O43623 268 aa11.77□□□□□ -0.52
LMCD1-204ENST00000426878 Q6ZSN1 163 aa11.77□□□□□ -0.52
LMCD1-204ENST00000426878 BIN3Q9NQY0 253 aa11.77□□□□□ -0.52
LMCD1-204ENST00000426878 PKHD1P08F94 4074 aa11.77□□□□□ -0.52
LMCD1-204ENST00000426878 RBFOX3A6NFN3 312 aa11.77□□□□□ -0.53
LMCD1-204ENST00000426878 CRYGDP07320 174 aa11.77□□□□□ -0.53
LMCD1-204ENST00000426878 DAZAP1Q96EP5 407 aaKnown RBP11.77□□□□□ -0.53
LMCD1-204ENST00000426878 TMEM250H0YL14 139 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms