RNA–Protein interactions for RNA: ENST00000425319.1

HLA-DQB3-203, Transcript of major histocompatibility complex, class II, DQ beta 3, humanhuman

BASIC

Gene HLA-DQB3, Length 356 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB3-203ENST00000425319 GCGP01275 180 aa8.13□□□□□ -1.11
HLA-DQB3-203ENST00000425319 RPL12P30050 165 aaKnown RBP8.13□□□□□ -1.11
HLA-DQB3-203ENST00000425319 Q0VG73 95 aa8.13□□□□□ -1.11
HLA-DQB3-203ENST00000425319 PIK3CD-AS1Q5SR53 167 aa8.13□□□□□ -1.11
HLA-DQB3-203ENST00000425319 C5orf17Q8NAS9 161 aa8.13□□□□□ -1.11
HLA-DQB3-203ENST00000425319 OR10G7Q8NGN6 311 aa8.13□□□□□ -1.11
HLA-DQB3-203ENST00000425319 S100ZQ8WXG8 99 aa8.13□□□□□ -1.11
HLA-DQB3-203ENST00000425319 HSPB11Q9Y547 144 aa8.13□□□□□ -1.11
HLA-DQB3-203ENST00000425319 PGPEP1LA6NFU8 196 aa8.12□□□□□ -1.11
HLA-DQB3-203ENST00000425319 ZNF506Q5JVG8 444 aa8.12□□□□□ -1.11
HLA-DQB3-203ENST00000425319 Q6ZSA8 131 aa8.12□□□□□ -1.11
HLA-DQB3-203ENST00000425319 DAZ4Q86SG3 579 aaKnown RBP8.12□□□□□ -1.11
HLA-DQB3-203ENST00000425319 CHAC1Q9BUX1 264 aa8.12□□□□□ -1.11
HLA-DQB3-203ENST00000425319 SMIM3Q9BZL3 60 aa8.12□□□□□ -1.11
HLA-DQB3-203ENST00000425319 DAZ3Q9NR90 486 aaKnown RBP8.12□□□□□ -1.11
HLA-DQB3-203ENST00000425319 PSG8Q9UQ74 426 aa8.12□□□□□ -1.11
HLA-DQB3-203ENST00000425319 FABP5P3A8MUU1 101 aa8.11□□□□□ -1.11
HLA-DQB3-203ENST00000425319 RHODO00212 210 aa8.11□□□□□ -1.11
HLA-DQB3-203ENST00000425319 SSNA1O43805 119 aa8.11□□□□□ -1.11
HLA-DQB3-203ENST00000425319 MBP02144 154 aa8.11□□□□□ -1.11
HLA-DQB3-203ENST00000425319 ASIPP42127 132 aa8.11□□□□□ -1.11
HLA-DQB3-203ENST00000425319 FLI1Q01543 452 aaPredicted RBP8.11□□□□□ -1.11
HLA-DQB3-203ENST00000425319 OR2T35Q8NGX2 323 aa8.11□□□□□ -1.11
HLA-DQB3-203ENST00000425319 PPP1R1CQ8WVI7 109 aa8.11□□□□□ -1.11
HLA-DQB3-203ENST00000425319 C9orf85Q96MD7 179 aa8.11□□□□□ -1.11
HLA-DQB3-203ENST00000425319 CHCHD7Q9BUK0 85 aa8.11□□□□□ -1.11
HLA-DQB3-203ENST00000425319 PLA2G2DQ9UNK4 145 aa8.11□□□□□ -1.11
HLA-DQB3-203ENST00000425319 HERC1Q15751 4861 aa8.11□□□□□ -1.11
HLA-DQB3-203ENST00000425319 RNF222A6NCQ9 220 aa8.1□□□□□ -1.11
HLA-DQB3-203ENST00000425319 TCRAP04437 139 aa8.1□□□□□ -1.11
HLA-DQB3-203ENST00000425319 CDC34P49427 236 aaPredicted RBP8.1□□□□□ -1.11
HLA-DQB3-203ENST00000425319 SUMO1P63165 101 aaKnown RBP8.1□□□□□ -1.11
HLA-DQB3-203ENST00000425319 SCXQ7RTU7 201 aa8.1□□□□□ -1.11
HLA-DQB3-203ENST00000425319 PRNTQ86SH4 94 aa8.1□□□□□ -1.11
HLA-DQB3-203ENST00000425319 OR2G3Q8NGZ4 309 aa8.1□□□□□ -1.11
HLA-DQB3-203ENST00000425319 SGK494Q96LW2 274 aa8.1□□□□□ -1.11
HLA-DQB3-203ENST00000425319 TMEM167BQ9NRX6 74 aa8.1□□□□□ -1.11
HLA-DQB3-203ENST00000425319 TMEM262E9PQX1 116 aa8.09□□□□□ -1.11
HLA-DQB3-203ENST00000425319 INMT-MINDY4F8WBC2 141 aa8.09□□□□□ -1.11
HLA-DQB3-203ENST00000425319 MPC2O95563 127 aa8.09□□□□□ -1.11
HLA-DQB3-203ENST00000425319 CRPP02741 224 aa8.09□□□□□ -1.11
HLA-DQB3-203ENST00000425319 GNG5P63218 68 aa8.09□□□□□ -1.11
HLA-DQB3-203ENST00000425319 DMRTA1Q5VZB9 504 aa8.09□□□□□ -1.11
HLA-DQB3-203ENST00000425319 LINC00299Q6ZSB3 139 aa8.09□□□□□ -1.11
HLA-DQB3-203ENST00000425319 UBE2WQ96B02 151 aa8.09□□□□□ -1.11
HLA-DQB3-203ENST00000425319 TVP23CQ96ET8 276 aa8.09□□□□□ -1.11
HLA-DQB3-203ENST00000425319 PARLQ9H300 379 aa8.09□□□□□ -1.11
HLA-DQB3-203ENST00000425319 KLK12Q9UKR0 248 aa8.09□□□□□ -1.11
HLA-DQB3-203ENST00000425319 EPDR1Q9UM22 224 aa8.09□□□□□ -1.11
HLA-DQB3-203ENST00000425319 H0YIZ8 118 aa8.08□□□□□ -1.12
HLA-DQB3-203ENST00000425319 IGLV2-8P01709 118 aa8.08□□□□□ -1.12
HLA-DQB3-203ENST00000425319 PKIAP61925 76 aa8.08□□□□□ -1.12
HLA-DQB3-203ENST00000425319 RPL36AP83881 106 aaKnown RBP8.08□□□□□ -1.12
HLA-DQB3-203ENST00000425319 DPPA3Q6W0C5 159 aa8.08□□□□□ -1.12
HLA-DQB3-203ENST00000425319 RPL36ALQ969Q0 106 aaKnown RBP8.08□□□□□ -1.12
HLA-DQB3-203ENST00000425319 C1orf43Q9BWL3 253 aa8.08□□□□□ -1.12
HLA-DQB3-203ENST00000425319 HMGB3O15347 200 aaKnown RBP8.07□□□□□ -1.12
HLA-DQB3-203ENST00000425319 CXorf1O96002 111 aa8.07□□□□□ -1.12
HLA-DQB3-203ENST00000425319 IFNA7P01567 189 aa8.07□□□□□ -1.12
HLA-DQB3-203ENST00000425319 ARL14EPLP0DKL9 152 aa8.07□□□□□ -1.12
HLA-DQB3-203ENST00000425319 NIT1Q86X76 327 aa8.07□□□□□ -1.12
HLA-DQB3-203ENST00000425319 TMEM75Q8N9X5 138 aa8.07□□□□□ -1.12
HLA-DQB3-203ENST00000425319 OR11H4Q8NGC9 324 aa8.07□□□□□ -1.12
HLA-DQB3-203ENST00000425319 CIRBP-AS1Q8TBR5 109 aa8.07□□□□□ -1.12
HLA-DQB3-203ENST00000425319 ACTR3CQ9C0K3 210 aaPredicted RBP8.07□□□□□ -1.12
HLA-DQB3-203ENST00000425319 FLG2Q5D862 2391 aaPredicted RBP8.07□□□□□ -1.12
HLA-DQB3-203ENST00000425319 SRRM2Q9UQ35 2752 aaKnown RBP8.06□□□□□ -1.12
HLA-DQB3-203ENST00000425319 B4DEV8 164 aa8.06□□□□□ -1.12
HLA-DQB3-203ENST00000425319 STAG3L2P0CL84 134 aa8.06□□□□□ -1.12
HLA-DQB3-203ENST00000425319 STAG3L3P0CL85 134 aa8.06□□□□□ -1.12
HLA-DQB3-203ENST00000425319 RNASE3P12724 160 aaKnown RBP8.06□□□□□ -1.12
HLA-DQB3-203ENST00000425319 ZNF80P51504 273 aaPredicted RBP8.06□□□□□ -1.12
HLA-DQB3-203ENST00000425319 RAB2AP61019 212 aa8.06□□□□□ -1.12
HLA-DQB3-203ENST00000425319 RPL37AP61513 92 aaKnown RBP8.06□□□□□ -1.12
HLA-DQB3-203ENST00000425319 SERF2P84101 59 aa8.06□□□□□ -1.12
HLA-DQB3-203ENST00000425319 WFDC2Q14508 124 aa8.06□□□□□ -1.12
HLA-DQB3-203ENST00000425319 FAM74A4Q5TZK3 123 aa8.06□□□□□ -1.12
HLA-DQB3-203ENST00000425319 DPH3Q96FX2 82 aa8.06□□□□□ -1.12
HLA-DQB3-203ENST00000425319 NKX6-2Q9C056 277 aaPredicted RBP8.06□□□□□ -1.12
HLA-DQB3-203ENST00000425319 IL36BQ9NZH7 164 aa8.06□□□□□ -1.12
HLA-DQB3-203ENST00000425319 PHLDA3Q9Y5J5 127 aa8.06□□□□□ -1.12
HLA-DQB3-203ENST00000425319 IGLV2-11P01706 119 aa8.05□□□□□ -1.12
HLA-DQB3-203ENST00000425319 TPT1P13693 172 aaKnown RBP8.05□□□□□ -1.12
HLA-DQB3-203ENST00000425319 GCHFRP30047 84 aa8.05□□□□□ -1.12
HLA-DQB3-203ENST00000425319 DEFA1P59665 94 aa8.05□□□□□ -1.12
HLA-DQB3-203ENST00000425319 DEFA3P59666 94 aa8.05□□□□□ -1.12
HLA-DQB3-203ENST00000425319 LINC01620Q4KN68 170 aa8.05□□□□□ -1.12
HLA-DQB3-203ENST00000425319 DPH3P1Q9H4G8 78 aa8.05□□□□□ -1.12
HLA-DQB3-203ENST00000425319 C11orf21Q9P2W6 132 aa8.05□□□□□ -1.12
HLA-DQB3-203ENST00000425319 A0A0D9SG52 128 aa8.04□□□□□ -1.12
HLA-DQB3-203ENST00000425319 TRBV10-1A0A0K0K1A3 114 aa8.04□□□□□ -1.12
HLA-DQB3-203ENST00000425319 EIF3GO75821 320 aaKnown RBP eCLIP8.04□□□□□ -1.12
HLA-DQB3-203ENST00000425319 DGAT2L7PQ6IED9 249 aa8.04□□□□□ -1.12
HLA-DQB3-203ENST00000425319 HSD17B11Q8NBQ5 300 aa8.04□□□□□ -1.12
HLA-DQB3-203ENST00000425319 RAB24Q969Q5 203 aa8.04□□□□□ -1.12
HLA-DQB3-203ENST00000425319 LINC00479Q96M42 142 aa8.04□□□□□ -1.12
HLA-DQB3-203ENST00000425319 SAMD10Q9BYL1 202 aa8.04□□□□□ -1.12
HLA-DQB3-203ENST00000425319 A0A1W2PRE2 83 aa8.03□□□□□ -1.12
HLA-DQB3-203ENST00000425319 ARMS2P0C7Q2 107 aa8.03□□□□□ -1.12
HLA-DQB3-203ENST00000425319 H2BFSP57053 126 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms