RNA–Protein interactions for RNA: ENST00000424804.6

VRK3-203, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,061 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-203ENST00000424804 C18orf15Q96N68 181 aa8.92□□□□□ -0.98
VRK3-203ENST00000424804 HHLA3Q9XRX5 114 aa8.92□□□□□ -0.98
VRK3-203ENST00000424804 VPS13BQ7Z7G8 4022 aa8.92□□□□□ -0.98
VRK3-203ENST00000424804 TMSB15BA0A087X1C1 80 aa8.91□□□□□ -0.98
VRK3-203ENST00000424804 B4DEV8 164 aa8.91□□□□□ -0.98
VRK3-203ENST00000424804 SH2D1AO60880 128 aa8.91□□□□□ -0.98
VRK3-203ENST00000424804 SULT1A2P50226 295 aa8.91□□□□□ -0.98
VRK3-203ENST00000424804 RAB5CP51148 216 aa8.91□□□□□ -0.98
VRK3-203ENST00000424804 CCL20P78556 96 aa8.91□□□□□ -0.98
VRK3-203ENST00000424804 FHL2Q14192 279 aa8.91□□□□□ -0.98
VRK3-203ENST00000424804 ZNF876PQ49A33 203 aa8.91□□□□□ -0.98
VRK3-203ENST00000424804 SPATA12Q7Z6I5 190 aa8.91□□□□□ -0.98
VRK3-203ENST00000424804 C9orf62Q8N4C0 152 aa8.91□□□□□ -0.98
VRK3-203ENST00000424804 MAPKAPK5-AS1Q8N8E1 139 aa8.91□□□□□ -0.98
VRK3-203ENST00000424804 PRO0255Q9UI72 69 aa8.91□□□□□ -0.98
VRK3-203ENST00000424804 ZFP30Q9Y2G7 519 aa8.91□□□□□ -0.98
VRK3-203ENST00000424804 ICOSQ9Y6W8 199 aa8.91□□□□□ -0.98
VRK3-203ENST00000424804 GRIFINA4D1Z8 144 aa8.9□□□□□ -0.98
VRK3-203ENST00000424804 BTF3P20290 206 aaKnown RBP8.9□□□□□ -0.98
VRK3-203ENST00000424804 ASIPP42127 132 aa8.9□□□□□ -0.98
VRK3-203ENST00000424804 CRYBA4P53673 196 aa8.9□□□□□ -0.98
VRK3-203ENST00000424804 Q6ZRN7 208 aaPredicted RBP8.9□□□□□ -0.98
VRK3-203ENST00000424804 Q8N1X5 172 aa8.9□□□□□ -0.98
VRK3-203ENST00000424804 PCNPQ8WW12 178 aaKnown RBP8.9□□□□□ -0.98
VRK3-203ENST00000424804 RASL10AQ92737 203 aa8.9□□□□□ -0.98
VRK3-203ENST00000424804 TCEAL7Q9BRU2 100 aa8.9□□□□□ -0.98
VRK3-203ENST00000424804 MANBALQ9NQG1 85 aa8.9□□□□□ -0.98
VRK3-203ENST00000424804 MRPS16Q9Y3D3 137 aaKnown RBP8.9□□□□□ -0.98
VRK3-203ENST00000424804 DNAH8Q96JB1 4490 aa8.89□□□□□ -0.99
VRK3-203ENST00000424804 IGHV3-73A0A0B4J1V6 119 aa8.89□□□□□ -0.99
VRK3-203ENST00000424804 TRAV4A0A0B4J268 109 aa8.89□□□□□ -0.99
VRK3-203ENST00000424804 IGKV3D-20A0A0C4DH25 116 aa8.89□□□□□ -0.99
VRK3-203ENST00000424804 A0A1W2PPQ1 181 aa8.89□□□□□ -0.99
VRK3-203ENST00000424804 CRIP1P50238 77 aa8.89□□□□□ -0.99
VRK3-203ENST00000424804 NKX2-5P52952 324 aaPredicted RBP8.89□□□□□ -0.99
VRK3-203ENST00000424804 SLAQ13239 276 aa8.89□□□□□ -0.99
VRK3-203ENST00000424804 FAM162BQ5T6X4 162 aa8.89□□□□□ -0.99
VRK3-203ENST00000424804 PRR27Q6MZM9 219 aa8.89□□□□□ -0.99
VRK3-203ENST00000424804 PGPEP1LA6NFU8 196 aa8.88□□□□□ -0.99
VRK3-203ENST00000424804 H3BVH4 76 aa8.88□□□□□ -0.99
VRK3-203ENST00000424804 LTAP01374 205 aa8.88□□□□□ -0.99
VRK3-203ENST00000424804 IFNA1P01562 189 aa8.88□□□□□ -0.99
VRK3-203ENST00000424804 RNASE3P12724 160 aaKnown RBP8.88□□□□□ -0.99
VRK3-203ENST00000424804 GYPEP15421 78 aa8.88□□□□□ -0.99
VRK3-203ENST00000424804 ZNF506Q5JVG8 444 aa8.88□□□□□ -0.99
VRK3-203ENST00000424804 ALKAL2Q6UX46 152 aa8.88□□□□□ -0.99
VRK3-203ENST00000424804 S100A9P06702 114 aaKnown RBP8.87□□□□□ -0.99
VRK3-203ENST00000424804 SRIP30626 198 aa8.87□□□□□ -0.99
VRK3-203ENST00000424804 MRPL23Q16540 153 aaKnown RBP8.87□□□□□ -0.99
VRK3-203ENST00000424804 BAGE2Q86Y30 109 aa8.87□□□□□ -0.99
VRK3-203ENST00000424804 C9orf85Q96MD7 179 aa8.87□□□□□ -0.99
VRK3-203ENST00000424804 TRAV1-1A0A0B4J248 108 aa8.86□□□□□ -0.99
VRK3-203ENST00000424804 TRBV6-1A0A0K0K1D8 114 aa8.86□□□□□ -0.99
VRK3-203ENST00000424804 KRBOX1C9JBD0 128 aa8.86□□□□□ -0.99
VRK3-203ENST00000424804 RPL35P42766 123 aaKnown RBP8.86□□□□□ -0.99
VRK3-203ENST00000424804 TTC32Q5I0X7 151 aa8.86□□□□□ -0.99
VRK3-203ENST00000424804 CFAP126Q5VTH2 177 aa8.86□□□□□ -0.99
VRK3-203ENST00000424804 DERL1Q9BUN8 251 aa8.86□□□□□ -0.99
VRK3-203ENST00000424804 LOC100131303A0A0U1RQF7 123 aa8.85□□□□□ -0.99
VRK3-203ENST00000424804 K7EQD1 137 aa8.85□□□□□ -0.99
VRK3-203ENST00000424804 RS1O15537 224 aa8.85□□□□□ -0.99
VRK3-203ENST00000424804 ARMS2P0C7Q2 107 aa8.85□□□□□ -0.99
VRK3-203ENST00000424804 MGST1P10620 155 aaKnown RBP8.85□□□□□ -0.99
VRK3-203ENST00000424804 LINC00315P59091 139 aa8.85□□□□□ -0.99
VRK3-203ENST00000424804 RPL19P84098 196 aaKnown RBP8.85□□□□□ -0.99
VRK3-203ENST00000424804 ZNF674Q2M3X9 581 aa8.85□□□□□ -0.99
VRK3-203ENST00000424804 SCRT2Q9NQ03 307 aa8.85□□□□□ -0.99
VRK3-203ENST00000424804 BOLA1Q9Y3E2 137 aa8.85□□□□□ -0.99
VRK3-203ENST00000424804 PHLDA3Q9Y5J5 127 aa8.85□□□□□ -0.99
VRK3-203ENST00000424804 TNFRSF18Q9Y5U5 241 aa8.85□□□□□ -0.99
VRK3-203ENST00000424804 M0R381 172 aa8.84□□□□□ -0.99
VRK3-203ENST00000424804 MEF2BQ02080 365 aaPredicted RBP8.84□□□□□ -0.99
VRK3-203ENST00000424804 CENPWQ5EE01 88 aa8.84□□□□□ -0.99
VRK3-203ENST00000424804 NEGR1Q7Z3B1 354 aa8.84□□□□□ -0.99
VRK3-203ENST00000424804 SYT8Q8NBV8 401 aa8.84□□□□□ -0.99
VRK3-203ENST00000424804 MED9Q9NWA0 146 aa8.84□□□□□ -0.99
VRK3-203ENST00000424804 RAB19A4D1S5 217 aa8.83□□□□□ -1
VRK3-203ENST00000424804 NXPH4O95158 308 aa8.83□□□□□ -1
VRK3-203ENST00000424804 BCL2P10415 239 aa8.83□□□□□ -1
VRK3-203ENST00000424804 GATA1P15976 413 aaPredicted RBP8.83□□□□□ -1
VRK3-203ENST00000424804 FUSP35637 526 aaKnown RBP eCLIP8.83□□□□□ -1
VRK3-203ENST00000424804 SSTP61278 116 aa8.83□□□□□ -1
VRK3-203ENST00000424804 LINC01559Q495D7 138 aa8.83□□□□□ -1
VRK3-203ENST00000424804 FAM74A4Q5TZK3 123 aa8.83□□□□□ -1
VRK3-203ENST00000424804 COX8CQ7Z4L0 72 aa8.83□□□□□ -1
VRK3-203ENST00000424804 JPT2Q9H910 190 aa8.83□□□□□ -1
VRK3-203ENST00000424804 IL36BQ9NZH7 164 aa8.83□□□□□ -1
VRK3-203ENST00000424804 A8MWV9 139 aa8.82□□□□□ -1
VRK3-203ENST00000424804 PDE6DO43924 150 aa8.82□□□□□ -1
VRK3-203ENST00000424804 GNG4P50150 75 aa8.82□□□□□ -1
VRK3-203ENST00000424804 BLOC1S1P78537 153 aa8.82□□□□□ -1
VRK3-203ENST00000424804 DMRTA1Q5VZB9 504 aa8.82□□□□□ -1
VRK3-203ENST00000424804 LYPD5Q6UWN5 251 aa8.82□□□□□ -1
VRK3-203ENST00000424804 SLC25A29Q8N8R3 303 aa8.82□□□□□ -1
VRK3-203ENST00000424804 C11orf52Q96A22 123 aa8.82□□□□□ -1
VRK3-203ENST00000424804 TXNDC17Q9BRA2 123 aa8.82□□□□□ -1
VRK3-203ENST00000424804 PRADC1Q9BSG0 188 aa8.82□□□□□ -1
VRK3-203ENST00000424804 VAX2Q9UIW0 290 aa8.82□□□□□ -1
VRK3-203ENST00000424804 SIVA1O15304 175 aa8.81□□□□□ -1
VRK3-203ENST00000424804 CEBPGP53567 150 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms