RNA–Protein interactions for RNA: ENST00000424424.1

PRNP-202, Transcript of prion protein, humanhuman

TSL 1 (best)

Gene PRNP, Length 806 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRNP-202ENST00000424424 NHLRC2Q8NBF2 726 aa12.94□□□□□ -0.34
PRNP-202ENST00000424424 Q9H8V8 135 aa12.94□□□□□ -0.34
PRNP-202ENST00000424424 IL36BQ9NZH7 164 aa12.94□□□□□ -0.34
PRNP-202ENST00000424424 MRPS16Q9Y3D3 137 aaKnown RBP12.94□□□□□ -0.34
PRNP-202ENST00000424424 FRAS1Q86XX4 4008 aa12.93□□□□□ -0.34
PRNP-202ENST00000424424 RS1O15537 224 aa12.93□□□□□ -0.34
PRNP-202ENST00000424424 SOHLH1Q5JUK2 328 aa12.93□□□□□ -0.34
PRNP-202ENST00000424424 ZNF506Q5JVG8 444 aa12.93□□□□□ -0.34
PRNP-202ENST00000424424 DNLZQ5SXM8 178 aa12.93□□□□□ -0.34
PRNP-202ENST00000424424 NEGR1Q7Z3B1 354 aa12.93□□□□□ -0.34
PRNP-202ENST00000424424 UPK3BQ9BT76 320 aa12.93□□□□□ -0.34
PRNP-202ENST00000424424 NBDYA0A0U1RRE5 68 aa12.92□□□□□ -0.34
PRNP-202ENST00000424424 PDE6DO43924 150 aa12.92□□□□□ -0.34
PRNP-202ENST00000424424 GYPEP15421 78 aa12.92□□□□□ -0.34
PRNP-202ENST00000424424 SRIP30626 198 aa12.92□□□□□ -0.34
PRNP-202ENST00000424424 TAGLN2P37802 199 aaKnown RBP12.92□□□□□ -0.34
PRNP-202ENST00000424424 RPL35P42766 123 aaKnown RBP12.92□□□□□ -0.34
PRNP-202ENST00000424424 MEF2BQ02080 365 aaPredicted RBP12.92□□□□□ -0.34
PRNP-202ENST00000424424 LINC01559Q495D7 138 aa12.92□□□□□ -0.34
PRNP-202ENST00000424424 PIK3CD-AS1Q5SR53 167 aa12.92□□□□□ -0.34
PRNP-202ENST00000424424 CFAP126Q5VTH2 177 aa12.92□□□□□ -0.34
PRNP-202ENST00000424424 C11orf52Q96A22 123 aa12.92□□□□□ -0.34
PRNP-202ENST00000424424 GRIFINA4D1Z8 144 aa12.91□□□□□ -0.34
PRNP-202ENST00000424424 A8MWV9 139 aa12.91□□□□□ -0.34
PRNP-202ENST00000424424 H3BVH4 76 aa12.91□□□□□ -0.34
PRNP-202ENST00000424424 K7EQD1 137 aa12.91□□□□□ -0.34
PRNP-202ENST00000424424 ARMS2P0C7Q2 107 aa12.91□□□□□ -0.34
PRNP-202ENST00000424424 BLOC1S1P78537 153 aa12.91□□□□□ -0.34
PRNP-202ENST00000424424 C1orf134Q5TEV5 83 aa12.91□□□□□ -0.34
PRNP-202ENST00000424424 ALKAL2Q6UX46 152 aa12.91□□□□□ -0.34
PRNP-202ENST00000424424 SYT8Q8NBV8 401 aa12.91□□□□□ -0.34
PRNP-202ENST00000424424 MLST8Q9BVC4 326 aa12.91□□□□□ -0.34
PRNP-202ENST00000424424 TMSB15BA0A087X1C1 80 aa12.9□□□□□ -0.34
PRNP-202ENST00000424424 BCL2P10415 239 aa12.9□□□□□ -0.34
PRNP-202ENST00000424424 GATA1P15976 413 aaPredicted RBP12.9□□□□□ -0.34
PRNP-202ENST00000424424 KRTAP17-1Q9BYP8 105 aa12.9□□□□□ -0.34
PRNP-202ENST00000424424 VAX2Q9UIW0 290 aa12.9□□□□□ -0.34
PRNP-202ENST00000424424 PHLDA3Q9Y5J5 127 aa12.9□□□□□ -0.34
PRNP-202ENST00000424424 TTC32Q5I0X7 151 aa12.89□□□□□ -0.35
PRNP-202ENST00000424424 PRR27Q6MZM9 219 aa12.89□□□□□ -0.35
PRNP-202ENST00000424424 SH2D6Q7Z4S9 175 aa12.89□□□□□ -0.35
PRNP-202ENST00000424424 PRADC1Q9BSG0 188 aa12.89□□□□□ -0.35
PRNP-202ENST00000424424 IGHV3-73A0A0B4J1V6 119 aa12.88□□□□□ -0.35
PRNP-202ENST00000424424 NKX2-5P52952 324 aaPredicted RBP12.88□□□□□ -0.35
PRNP-202ENST00000424424 LYPD5Q6UWN5 251 aa12.88□□□□□ -0.35
PRNP-202ENST00000424424 DERL1Q9BUN8 251 aa12.88□□□□□ -0.35
PRNP-202ENST00000424424 MED9Q9NWA0 146 aa12.88□□□□□ -0.35
PRNP-202ENST00000424424 TRBV6-4A0A1B0GX49 114 aa12.87□□□□□ -0.35
PRNP-202ENST00000424424 RTL8CO15255 209 aa12.87□□□□□ -0.35
PRNP-202ENST00000424424 MGST1P10620 155 aaKnown RBP12.87□□□□□ -0.35
PRNP-202ENST00000424424 RHOHQ15669 191 aa12.87□□□□□ -0.35
PRNP-202ENST00000424424 ZFP2Q6ZN57 461 aa12.87□□□□□ -0.35
PRNP-202ENST00000424424 SLC25A29Q8N8R3 303 aa12.87□□□□□ -0.35
PRNP-202ENST00000424424 PRSS29PA6NIE9 313 aa12.86□□□□□ -0.35
PRNP-202ENST00000424424 SIVA1O15304 175 aa12.86□□□□□ -0.35
PRNP-202ENST00000424424 CXCL1P09341 107 aa12.86□□□□□ -0.35
PRNP-202ENST00000424424 GNG4P50150 75 aa12.86□□□□□ -0.35
PRNP-202ENST00000424424 CENPWQ5EE01 88 aa12.86□□□□□ -0.35
PRNP-202ENST00000424424 DMRTA1Q5VZB9 504 aa12.86□□□□□ -0.35
PRNP-202ENST00000424424 SMIM12Q96EX1 92 aa12.86□□□□□ -0.35
PRNP-202ENST00000424424 PARLQ9H300 379 aa12.86□□□□□ -0.35
PRNP-202ENST00000424424 LOC100131303A0A0U1RQF7 123 aa12.85□□□□□ -0.35
PRNP-202ENST00000424424 A0A1W2PPQ1 181 aa12.85□□□□□ -0.35
PRNP-202ENST00000424424 NXPH4O95158 308 aa12.85□□□□□ -0.35
PRNP-202ENST00000424424 MED14OSP0DP75 135 aa12.85□□□□□ -0.35
PRNP-202ENST00000424424 ZFP82Q8N141 532 aa12.85□□□□□ -0.35
PRNP-202ENST00000424424 C6orf223Q8N319 242 aa12.85□□□□□ -0.35
PRNP-202ENST00000424424 DAZAP1Q96EP5 407 aaKnown RBP12.85□□□□□ -0.35
PRNP-202ENST00000424424 SCRT2Q9NQ03 307 aa12.85□□□□□ -0.35
PRNP-202ENST00000424424 RAB19A4D1S5 217 aa12.84□□□□□ -0.35
PRNP-202ENST00000424424 M0R381 172 aa12.84□□□□□ -0.35
PRNP-202ENST00000424424 RHODO00212 210 aa12.84□□□□□ -0.35
PRNP-202ENST00000424424 RPL19P84098 196 aaKnown RBP12.84□□□□□ -0.35
PRNP-202ENST00000424424 ZNF575Q86XF7 245 aa12.84□□□□□ -0.35
PRNP-202ENST00000424424 BIN3Q9NQY0 253 aa12.84□□□□□ -0.35
PRNP-202ENST00000424424 BOLA1Q9Y3E2 137 aa12.84□□□□□ -0.35
PRNP-202ENST00000424424 HERC2O95714 4834 aa12.83□□□□□ -0.36
PRNP-202ENST00000424424 JPT2Q9H910 190 aa12.83□□□□□ -0.36
PRNP-202ENST00000424424 LYPD6BQ8NI32 183 aa12.82□□□□□ -0.36
PRNP-202ENST00000424424 SFRP2Q96HF1 295 aa12.82□□□□□ -0.36
PRNP-202ENST00000424424 RBFOX3A6NFN3 312 aa12.81□□□□□ -0.36
PRNP-202ENST00000424424 IGLV2-8P01709 118 aa12.81□□□□□ -0.36
PRNP-202ENST00000424424 FAM74A4Q5TZK3 123 aa12.81□□□□□ -0.36
PRNP-202ENST00000424424 DNAH10Q8IVF4 4471 aa12.8□□□□□ -0.36
PRNP-202ENST00000424424 TRAV9-2A0A087WT02 112 aa12.8□□□□□ -0.36
PRNP-202ENST00000424424 BTF3P20290 206 aaKnown RBP12.8□□□□□ -0.36
PRNP-202ENST00000424424 RPS20P60866 119 aaKnown RBP12.8□□□□□ -0.36
PRNP-202ENST00000424424 SAMD10Q9BYL1 202 aa12.8□□□□□ -0.36
PRNP-202ENST00000424424 XKRY2A2RUG3 117 aa12.79□□□□□ -0.36
PRNP-202ENST00000424424 SNAI2O43623 268 aa12.79□□□□□ -0.36
PRNP-202ENST00000424424 OR5AL1P0C617 328 aa12.79□□□□□ -0.36
PRNP-202ENST00000424424 TIRAPP58753 221 aa12.79□□□□□ -0.36
PRNP-202ENST00000424424 SPANXN1Q5VSR9 72 aa12.79□□□□□ -0.36
PRNP-202ENST00000424424 UFSP1Q6NVU6 142 aa12.79□□□□□ -0.36
PRNP-202ENST00000424424 SSBP4Q9BWG4 385 aaPredicted RBP12.79□□□□□ -0.36
PRNP-202ENST00000424424 LY96Q9Y6Y9 160 aa12.79□□□□□ -0.36
PRNP-202ENST00000424424 A0A087WWL8 130 aa12.78□□□□□ -0.36
PRNP-202ENST00000424424 TMEM250H0YL14 139 aa12.78□□□□□ -0.36
PRNP-202ENST00000424424 P01737 135 aa12.78□□□□□ -0.36
PRNP-202ENST00000424424 Q6ZSN1 163 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms