RNA–Protein interactions for RNA: ENST00000423567.1

USP49-204, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 2

Gene USP49, Length 752 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-204ENST00000423567 CRYBA4P53673 196 aa7.6□□□□□ -1.19
USP49-204ENST00000423567 MRPL23Q16540 153 aaKnown RBP7.6□□□□□ -1.19
USP49-204ENST00000423567 LINC00336Q6ZUF6 198 aa7.6□□□□□ -1.19
USP49-204ENST00000423567 COX8CQ7Z4L0 72 aa7.6□□□□□ -1.19
USP49-204ENST00000423567 ZC2HC1AQ96GY0 325 aa7.6□□□□□ -1.19
USP49-204ENST00000423567 C9orf85Q96MD7 179 aa7.6□□□□□ -1.19
USP49-204ENST00000423567 TXNDC17Q9BRA2 123 aa7.6□□□□□ -1.19
USP49-204ENST00000423567 GNG13Q9P2W3 67 aa7.6□□□□□ -1.19
USP49-204ENST00000423567 M0R036 132 aa7.59□□□□□ -1.19
USP49-204ENST00000423567 CIDEAO60543 219 aa7.59□□□□□ -1.19
USP49-204ENST00000423567 SH2D1AO60880 128 aa7.59□□□□□ -1.19
USP49-204ENST00000423567 SRIP30626 198 aa7.59□□□□□ -1.19
USP49-204ENST00000423567 ESRGQ1W209 222 aa7.59□□□□□ -1.19
USP49-204ENST00000423567 BAGE2Q86Y30 109 aa7.59□□□□□ -1.19
USP49-204ENST00000423567 C9orf62Q8N4C0 152 aa7.59□□□□□ -1.19
USP49-204ENST00000423567 ZNRF2Q8NHG8 242 aa7.59□□□□□ -1.19
USP49-204ENST00000423567 KRTAP9-2Q9BYQ4 174 aa7.59□□□□□ -1.19
USP49-204ENST00000423567 Q9H8V8 135 aa7.59□□□□□ -1.19
USP49-204ENST00000423567 MRPS16Q9Y3D3 137 aaKnown RBP7.59□□□□□ -1.19
USP49-204ENST00000423567 IGKV3D-20A0A0C4DH25 116 aa7.58□□□□□ -1.2
USP49-204ENST00000423567 NBDYA0A0U1RRE5 68 aa7.58□□□□□ -1.2
USP49-204ENST00000423567 RNASE3P12724 160 aaKnown RBP7.58□□□□□ -1.2
USP49-204ENST00000423567 GYPEP15421 78 aa7.58□□□□□ -1.2
USP49-204ENST00000423567 CCL20P78556 96 aa7.58□□□□□ -1.2
USP49-204ENST00000423567 ZNF674Q2M3X9 581 aa7.58□□□□□ -1.2
USP49-204ENST00000423567 TTC32Q5I0X7 151 aa7.58□□□□□ -1.2
USP49-204ENST00000423567 C1orf134Q5TEV5 83 aa7.58□□□□□ -1.2
USP49-204ENST00000423567 Q6ZR54 194 aa7.58□□□□□ -1.2
USP49-204ENST00000423567 NHLRC2Q8NBF2 726 aa7.58□□□□□ -1.2
USP49-204ENST00000423567 PTH2Q96A98 100 aa7.58□□□□□ -1.2
USP49-204ENST00000423567 UPK3BQ9BT76 320 aa7.58□□□□□ -1.2
USP49-204ENST00000423567 KMT2AQ03164 3969 aa7.58□□□□□ -1.2
USP49-204ENST00000423567 EPPK1P58107 5090 aaKnown RBP7.57□□□□□ -1.2
USP49-204ENST00000423567 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.57□□□□□ -1.2
USP49-204ENST00000423567 KRBOX1C9JBD0 128 aa7.57□□□□□ -1.2
USP49-204ENST00000423567 H3BVH4 76 aa7.57□□□□□ -1.2
USP49-204ENST00000423567 RS1O15537 224 aa7.57□□□□□ -1.2
USP49-204ENST00000423567 CRIP1P50238 77 aa7.57□□□□□ -1.2
USP49-204ENST00000423567 ZNF506Q5JVG8 444 aa7.57□□□□□ -1.2
USP49-204ENST00000423567 CFAP126Q5VTH2 177 aa7.57□□□□□ -1.2
USP49-204ENST00000423567 NEGR1Q7Z3B1 354 aa7.57□□□□□ -1.2
USP49-204ENST00000423567 SH2D6Q7Z4S9 175 aa7.57□□□□□ -1.2
USP49-204ENST00000423567 SYT8Q8NBV8 401 aa7.57□□□□□ -1.2
USP49-204ENST00000423567 IL36BQ9NZH7 164 aa7.57□□□□□ -1.2
USP49-204ENST00000423567 MUC4Q99102 2169 aa7.56□□□□□ -1.2
USP49-204ENST00000423567 TMSB15BA0A087X1C1 80 aa7.56□□□□□ -1.2
USP49-204ENST00000423567 GRIFINA4D1Z8 144 aa7.56□□□□□ -1.2
USP49-204ENST00000423567 PGPEP1LA6NFU8 196 aa7.56□□□□□ -1.2
USP49-204ENST00000423567 A8MWV9 139 aa7.56□□□□□ -1.2
USP49-204ENST00000423567 K7EQD1 137 aa7.56□□□□□ -1.2
USP49-204ENST00000423567 PDE6DO43924 150 aa7.56□□□□□ -1.2
USP49-204ENST00000423567 GATA1P15976 413 aaPredicted RBP7.56□□□□□ -1.2
USP49-204ENST00000423567 TAGLN2P37802 199 aaKnown RBP7.56□□□□□ -1.2
USP49-204ENST00000423567 RPL35P42766 123 aaKnown RBP7.56□□□□□ -1.2
USP49-204ENST00000423567 MEF2BQ02080 365 aaPredicted RBP7.56□□□□□ -1.2
USP49-204ENST00000423567 PIK3CD-AS1Q5SR53 167 aa7.56□□□□□ -1.2
USP49-204ENST00000423567 C11orf52Q96A22 123 aa7.56□□□□□ -1.2
USP49-204ENST00000423567 PRADC1Q9BSG0 188 aa7.56□□□□□ -1.2
USP49-204ENST00000423567 PHLDA3Q9Y5J5 127 aa7.56□□□□□ -1.2
USP49-204ENST00000423567 BIRC6Q9NR09 4857 aa7.55□□□□□ -1.2
USP49-204ENST00000423567 IGHV3-73A0A0B4J1V6 119 aa7.55□□□□□ -1.2
USP49-204ENST00000423567 PRSS29PA6NIE9 313 aa7.55□□□□□ -1.2
USP49-204ENST00000423567 ARMS2P0C7Q2 107 aa7.55□□□□□ -1.2
USP49-204ENST00000423567 BCL2P10415 239 aa7.55□□□□□ -1.2
USP49-204ENST00000423567 BLOC1S1P78537 153 aa7.55□□□□□ -1.2
USP49-204ENST00000423567 RHOHQ15669 191 aa7.55□□□□□ -1.2
USP49-204ENST00000423567 DNLZQ5SXM8 178 aa7.55□□□□□ -1.2
USP49-204ENST00000423567 PRR27Q6MZM9 219 aa7.55□□□□□ -1.2
USP49-204ENST00000423567 DNAH6Q9C0G6 4158 aa7.55□□□□□ -1.2
USP49-204ENST00000423567 TRBV6-4A0A1B0GX49 114 aa7.54□□□□□ -1.2
USP49-204ENST00000423567 A0A1W2PPQ1 181 aa7.54□□□□□ -1.2
USP49-204ENST00000423567 RTL8CO15255 209 aa7.54□□□□□ -1.2
USP49-204ENST00000423567 SIVA1O15304 175 aa7.54□□□□□ -1.2
USP49-204ENST00000423567 NXPH4O95158 308 aa7.54□□□□□ -1.2
USP49-204ENST00000423567 MGST1P10620 155 aaKnown RBP7.54□□□□□ -1.2
USP49-204ENST00000423567 LYPD5Q6UWN5 251 aa7.54□□□□□ -1.2
USP49-204ENST00000423567 ALKAL2Q6UX46 152 aa7.54□□□□□ -1.2
USP49-204ENST00000423567 ZFP2Q6ZN57 461 aa7.54□□□□□ -1.2
USP49-204ENST00000423567 ZFP82Q8N141 532 aa7.54□□□□□ -1.2
USP49-204ENST00000423567 C6orf223Q8N319 242 aa7.54□□□□□ -1.2
USP49-204ENST00000423567 SLC25A29Q8N8R3 303 aa7.54□□□□□ -1.2
USP49-204ENST00000423567 MED9Q9NWA0 146 aa7.54□□□□□ -1.2
USP49-204ENST00000423567 VAX2Q9UIW0 290 aa7.54□□□□□ -1.2
USP49-204ENST00000423567 DNAH10Q8IVF4 4471 aa7.54□□□□□ -1.2
USP49-204ENST00000423567 KRTAP9-6A0A140TA67 174 aa7.53□□□□□ -1.2
USP49-204ENST00000423567 A0A1B0GVG6 124 aa7.53□□□□□ -1.2
USP49-204ENST00000423567 RHODO00212 210 aa7.53□□□□□ -1.2
USP49-204ENST00000423567 GNG4P50150 75 aa7.53□□□□□ -1.2
USP49-204ENST00000423567 CENPWQ5EE01 88 aa7.53□□□□□ -1.2
USP49-204ENST00000423567 DAZAP1Q96EP5 407 aaKnown RBP7.53□□□□□ -1.2
USP49-204ENST00000423567 DERL1Q9BUN8 251 aa7.53□□□□□ -1.2
USP49-204ENST00000423567 MLST8Q9BVC4 326 aa7.53□□□□□ -1.2
USP49-204ENST00000423567 PARLQ9H300 379 aa7.53□□□□□ -1.2
USP49-204ENST00000423567 BIN3Q9NQY0 253 aa7.53□□□□□ -1.2
USP49-204ENST00000423567 NACAE9PAV3 2078 aa7.53□□□□□ -1.2
USP49-204ENST00000423567 M0R381 172 aa7.52□□□□□ -1.21
USP49-204ENST00000423567 CXCL1P09341 107 aa7.52□□□□□ -1.21
USP49-204ENST00000423567 MED14OSP0DP75 135 aa7.52□□□□□ -1.21
USP49-204ENST00000423567 NKX2-5P52952 324 aaPredicted RBP7.52□□□□□ -1.21
USP49-204ENST00000423567 FAM74A4Q5TZK3 123 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms