RNA–Protein interactions for RNA: ENST00000423271.7

USB1-202, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,217 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-202ENST00000423271 TYMSP04818 313 aa10.46□□□□□ -0.73
USB1-202ENST00000423271 S100A9P06702 114 aaKnown RBP10.46□□□□□ -0.73
USB1-202ENST00000423271 LCE2DQ5TA82 110 aaPredicted RBP10.46□□□□□ -0.73
USB1-202ENST00000423271 COX8CQ7Z4L0 72 aa10.46□□□□□ -0.73
USB1-202ENST00000423271 NHLRC2Q8NBF2 726 aa10.46□□□□□ -0.73
USB1-202ENST00000423271 PCNPQ8WW12 178 aaKnown RBP10.46□□□□□ -0.73
USB1-202ENST00000423271 DERL1Q9BUN8 251 aa10.46□□□□□ -0.73
USB1-202ENST00000423271 TRGV11A0A075B6L2 103 aa10.45□□□□□ -0.74
USB1-202ENST00000423271 PAX4O43316 350 aa10.45□□□□□ -0.74
USB1-202ENST00000423271 PDE6DO43924 150 aa10.45□□□□□ -0.74
USB1-202ENST00000423271 TAGLN2P37802 199 aaKnown RBP10.45□□□□□ -0.74
USB1-202ENST00000423271 RPL35P42766 123 aaKnown RBP10.45□□□□□ -0.74
USB1-202ENST00000423271 CRIP1P50238 77 aa10.45□□□□□ -0.74
USB1-202ENST00000423271 TTC32Q5I0X7 151 aa10.45□□□□□ -0.74
USB1-202ENST00000423271 BAGE2Q86Y30 109 aa10.45□□□□□ -0.74
USB1-202ENST00000423271 KCNS1Q96KK3 526 aa10.45□□□□□ -0.74
USB1-202ENST00000423271 IGHV3-16A0A0C4DH30 117 aa10.44□□□□□ -0.74
USB1-202ENST00000423271 RBFOX3A6NFN3 312 aa10.44□□□□□ -0.74
USB1-202ENST00000423271 FABP5P3A8MUU1 101 aa10.44□□□□□ -0.74
USB1-202ENST00000423271 FHL2Q14192 279 aa10.44□□□□□ -0.74
USB1-202ENST00000423271 SDF2L1Q9HCN8 221 aa10.44□□□□□ -0.74
USB1-202ENST00000423271 MED9Q9NWA0 146 aa10.44□□□□□ -0.74
USB1-202ENST00000423271 ICOSQ9Y6W8 199 aa10.44□□□□□ -0.74
USB1-202ENST00000423271 SH2D1AO60880 128 aa10.43□□□□□ -0.74
USB1-202ENST00000423271 SFTA3P0C7M3 94 aa10.43□□□□□ -0.74
USB1-202ENST00000423271 CRYBA4P53673 196 aa10.43□□□□□ -0.74
USB1-202ENST00000423271 TOR2AQ5JU69 321 aa10.43□□□□□ -0.74
USB1-202ENST00000423271 ZNF506Q5JVG8 444 aa10.43□□□□□ -0.74
USB1-202ENST00000423271 ZNF479Q96JC4 524 aa10.43□□□□□ -0.74
USB1-202ENST00000423271 PRO0255Q9UI72 69 aa10.43□□□□□ -0.74
USB1-202ENST00000423271 RAB19A4D1S5 217 aa10.42□□□□□ -0.74
USB1-202ENST00000423271 C16orf90A8MZG2 172 aa10.42□□□□□ -0.74
USB1-202ENST00000423271 ZNF674Q2M3X9 581 aa10.42□□□□□ -0.74
USB1-202ENST00000423271 CENPWQ5EE01 88 aa10.42□□□□□ -0.74
USB1-202ENST00000423271 FAM162BQ5T6X4 162 aa10.42□□□□□ -0.74
USB1-202ENST00000423271 MLST8Q9BVC4 326 aa10.42□□□□□ -0.74
USB1-202ENST00000423271 HHLA3Q9XRX5 114 aa10.42□□□□□ -0.74
USB1-202ENST00000423271 IGKV3D-20A0A0C4DH25 116 aa10.41□□□□□ -0.74
USB1-202ENST00000423271 A0A1W2PPQ1 181 aa10.41□□□□□ -0.74
USB1-202ENST00000423271 M0R036 132 aa10.41□□□□□ -0.74
USB1-202ENST00000423271 RASL10AQ92737 203 aa10.41□□□□□ -0.74
USB1-202ENST00000423271 FAM210AQ96ND0 272 aa10.41□□□□□ -0.74
USB1-202ENST00000423271 SPXQ9BT56 116 aa10.41□□□□□ -0.74
USB1-202ENST00000423271 TRGV4A0A0C4DH28 118 aa10.4□□□□□ -0.74
USB1-202ENST00000423271 B4DEV8 164 aa10.4□□□□□ -0.74
USB1-202ENST00000423271 NXPH4O95158 308 aa10.4□□□□□ -0.74
USB1-202ENST00000423271 ORM1P02763 201 aa10.4□□□□□ -0.74
USB1-202ENST00000423271 PRR27Q6MZM9 219 aa10.4□□□□□ -0.74
USB1-202ENST00000423271 EIF5A2Q9GZV4 153 aaKnown RBP10.4□□□□□ -0.74
USB1-202ENST00000423271 TRBV20OR9-2A0A075B6H5 130 aa10.39□□□□□ -0.75
USB1-202ENST00000423271 KRBOX1C9JBD0 128 aa10.39□□□□□ -0.75
USB1-202ENST00000423271 SIVA1O15304 175 aa10.39□□□□□ -0.75
USB1-202ENST00000423271 IGLV2-8P01709 118 aa10.39□□□□□ -0.75
USB1-202ENST00000423271 LINC00315P59091 139 aa10.39□□□□□ -0.75
USB1-202ENST00000423271 SLAQ13239 276 aa10.39□□□□□ -0.75
USB1-202ENST00000423271 TMSB15BA0A087X1C1 80 aa10.38□□□□□ -0.75
USB1-202ENST00000423271 GRIFINA4D1Z8 144 aa10.38□□□□□ -0.75
USB1-202ENST00000423271 PGPEP1LA6NFU8 196 aa10.38□□□□□ -0.75
USB1-202ENST00000423271 TMEM250H0YL14 139 aa10.38□□□□□ -0.75
USB1-202ENST00000423271 K7EQD1 137 aa10.38□□□□□ -0.75
USB1-202ENST00000423271 M0R2P5 195 aa10.38□□□□□ -0.75
USB1-202ENST00000423271 RNASE3P12724 160 aaKnown RBP10.38□□□□□ -0.75
USB1-202ENST00000423271 GNG4P50150 75 aa10.38□□□□□ -0.75
USB1-202ENST00000423271 MRPL23Q16540 153 aaKnown RBP10.38□□□□□ -0.75
USB1-202ENST00000423271 LINC01559Q495D7 138 aa10.38□□□□□ -0.75
USB1-202ENST00000423271 LYPD5Q6UWN5 251 aa10.38□□□□□ -0.75
USB1-202ENST00000423271 SPATA12Q7Z6I5 190 aa10.38□□□□□ -0.75
USB1-202ENST00000423271 C9orf85Q96MD7 179 aa10.38□□□□□ -0.75
USB1-202ENST00000423271 TRAV4A0A0B4J268 109 aa10.37□□□□□ -0.75
USB1-202ENST00000423271 MGST1P10620 155 aaKnown RBP10.37□□□□□ -0.75
USB1-202ENST00000423271 GYPEP15421 78 aa10.37□□□□□ -0.75
USB1-202ENST00000423271 ASIPP42127 132 aa10.37□□□□□ -0.75
USB1-202ENST00000423271 RPL19P84098 196 aaKnown RBP10.37□□□□□ -0.75
USB1-202ENST00000423271 C4orf48Q5BLP8 95 aa10.37□□□□□ -0.75
USB1-202ENST00000423271 NEGR1Q7Z3B1 354 aa10.37□□□□□ -0.75
USB1-202ENST00000423271 PARLQ9H300 379 aa10.37□□□□□ -0.75
USB1-202ENST00000423271 SRP19P09132 144 aaKnown RBP10.36□□□□□ -0.75
USB1-202ENST00000423271 S100A4P26447 101 aaKnown RBP10.36□□□□□ -0.75
USB1-202ENST00000423271 SRIP30626 198 aa10.36□□□□□ -0.75
USB1-202ENST00000423271 CEBPGP53567 150 aa10.36□□□□□ -0.75
USB1-202ENST00000423271 KRTAP10-2P60368 255 aa10.36□□□□□ -0.75
USB1-202ENST00000423271 Q6ZRN7 208 aaPredicted RBP10.36□□□□□ -0.75
USB1-202ENST00000423271 OR4C5Q8NGB2 326 aa10.36□□□□□ -0.75
USB1-202ENST00000423271 SMIM12Q96EX1 92 aa10.36□□□□□ -0.75
USB1-202ENST00000423271 LOC100131303A0A0U1RQF7 123 aa10.35□□□□□ -0.75
USB1-202ENST00000423271 C9JCJ5 164 aa10.35□□□□□ -0.75
USB1-202ENST00000423271 H3BVH4 76 aa10.35□□□□□ -0.75
USB1-202ENST00000423271 NDUFS6O75380 124 aaKnown RBP10.35□□□□□ -0.75
USB1-202ENST00000423271 BTF3P20290 206 aaKnown RBP10.35□□□□□ -0.75
USB1-202ENST00000423271 IFITM2Q01629 132 aa10.35□□□□□ -0.75
USB1-202ENST00000423271 DNLZQ5SXM8 178 aa10.35□□□□□ -0.75
USB1-202ENST00000423271 KRTAP4-5Q9BYR2 181 aa10.35□□□□□ -0.75
USB1-202ENST00000423271 TNFRSF18Q9Y5U5 241 aa10.35□□□□□ -0.75
USB1-202ENST00000423271 ARMS2P0C7Q2 107 aa10.34□□□□□ -0.75
USB1-202ENST00000423271 ZNF876PQ49A33 203 aa10.34□□□□□ -0.75
USB1-202ENST00000423271 WFDC10BQ8IUB3 73 aa10.34□□□□□ -0.75
USB1-202ENST00000423271 KRTAP3-3Q9BYR6 98 aa10.34□□□□□ -0.75
USB1-202ENST00000423271 KRTAP3-2Q9BYR7 98 aa10.34□□□□□ -0.75
USB1-202ENST00000423271 C19orf71A6NCJ1 209 aa10.33□□□□□ -0.76
USB1-202ENST00000423271 K7EN84 100 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms