RNA–Protein interactions for RNA: ENST00000421459.2

VIM-202, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 753 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-202ENST00000421459 FBLL1A6NHQ2 334 aaKnown RBP5.35□□□□□ -1.55
VIM-202ENST00000421459 KRTAP29-1A8MX34 341 aaPredicted RBP5.35□□□□□ -1.55
VIM-202ENST00000421459 TAAR5O14804 337 aa5.35□□□□□ -1.55
VIM-202ENST00000421459 RS1O15537 224 aa5.35□□□□□ -1.55
VIM-202ENST00000421459 TIRAPP58753 221 aa5.35□□□□□ -1.55
VIM-202ENST00000421459 IFITM2Q01629 132 aa5.35□□□□□ -1.55
VIM-202ENST00000421459 ZNF876PQ49A33 203 aa5.35□□□□□ -1.55
VIM-202ENST00000421459 DAZ4Q86SG3 579 aaKnown RBP5.35□□□□□ -1.55
VIM-202ENST00000421459 STOML3Q8TAV4 291 aa5.35□□□□□ -1.55
VIM-202ENST00000421459 BAALCQ8WXS3 180 aa5.35□□□□□ -1.55
VIM-202ENST00000421459 TREM1Q9NP99 234 aa5.35□□□□□ -1.55
VIM-202ENST00000421459 DAZ3Q9NR90 486 aaKnown RBP5.35□□□□□ -1.55
VIM-202ENST00000421459 KANTRA0A1W2PQU2 76 aa5.34□□□□□ -1.55
VIM-202ENST00000421459 GAGE12JA6NER3 117 aa5.34□□□□□ -1.55
VIM-202ENST00000421459 C17orf112F2Z3M2 114 aa5.34□□□□□ -1.55
VIM-202ENST00000421459 PLA2G1BP04054 148 aaKnown RBP5.34□□□□□ -1.55
VIM-202ENST00000421459 PFN1P07737 140 aaKnown RBP5.34□□□□□ -1.55
VIM-202ENST00000421459 KRTAP10-4P60372 401 aaPredicted RBP5.34□□□□□ -1.55
VIM-202ENST00000421459 GAGE1Q13065 139 aa5.34□□□□□ -1.55
VIM-202ENST00000421459 GAGE4Q13068 117 aa5.34□□□□□ -1.55
VIM-202ENST00000421459 GAGE5Q13069 117 aa5.34□□□□□ -1.55
VIM-202ENST00000421459 GAGE13Q4V321 117 aa5.34□□□□□ -1.55
VIM-202ENST00000421459 LELP1Q5T871 98 aa5.34□□□□□ -1.55
VIM-202ENST00000421459 Q6ZSA8 131 aa5.34□□□□□ -1.55
VIM-202ENST00000421459 SCXQ7RTU7 201 aa5.34□□□□□ -1.55
VIM-202ENST00000421459 SH2D6Q7Z4S9 175 aa5.34□□□□□ -1.55
VIM-202ENST00000421459 SLC51BQ86UW2 128 aa5.34□□□□□ -1.55
VIM-202ENST00000421459 ATP5SQ99766 215 aa5.34□□□□□ -1.55
VIM-202ENST00000421459 WFDC1Q9HC57 220 aa5.34□□□□□ -1.55
VIM-202ENST00000421459 SDF2L1Q9HCN8 221 aa5.34□□□□□ -1.55
VIM-202ENST00000421459 OTORQ9NRC9 128 aa5.34□□□□□ -1.55
VIM-202ENST00000421459 LENEPQ9Y5L5 61 aa5.34□□□□□ -1.55
VIM-202ENST00000421459 RAB2AP61019 212 aa5.33□□□□□ -1.56
VIM-202ENST00000421459 RHOHQ15669 191 aa5.33□□□□□ -1.56
VIM-202ENST00000421459 KHDC3LQ587J8 217 aa5.33□□□□□ -1.56
VIM-202ENST00000421459 ZNF506Q5JVG8 444 aa5.33□□□□□ -1.56
VIM-202ENST00000421459 TEX261Q6UWH6 196 aa5.33□□□□□ -1.56
VIM-202ENST00000421459 ATP6V0E2Q8NHE4 81 aa5.33□□□□□ -1.56
VIM-202ENST00000421459 CMTM2Q8TAZ6 248 aa5.33□□□□□ -1.56
VIM-202ENST00000421459 TMED6Q8WW62 240 aa5.33□□□□□ -1.56
VIM-202ENST00000421459 PRADC1Q9BSG0 188 aa5.33□□□□□ -1.56
VIM-202ENST00000421459 GTSF1LQ9H1H1 148 aa5.33□□□□□ -1.56
VIM-202ENST00000421459 JPT2Q9H910 190 aa5.33□□□□□ -1.56
VIM-202ENST00000421459 RNF213Q63HN8 5207 aa5.32□□□□□ -1.56
VIM-202ENST00000421459 TRBV6-4A0A1B0GX49 114 aa5.32□□□□□ -1.56
VIM-202ENST00000421459 RNASE3P12724 160 aaKnown RBP5.32□□□□□ -1.56
VIM-202ENST00000421459 TPT1P13693 172 aaKnown RBP5.32□□□□□ -1.56
VIM-202ENST00000421459 EIF5AP63241 154 aaKnown RBP5.32□□□□□ -1.56
VIM-202ENST00000421459 RPL7L1Q6DKI1 246 aaKnown RBP5.32□□□□□ -1.56
VIM-202ENST00000421459 DEFB104AQ8WTQ1 72 aa5.32□□□□□ -1.56
VIM-202ENST00000421459 KCNS1Q96KK3 526 aa5.32□□□□□ -1.56
VIM-202ENST00000421459 C9orf85Q96MD7 179 aa5.32□□□□□ -1.56
VIM-202ENST00000421459 TM2D2Q9BX73 214 aa5.32□□□□□ -1.56
VIM-202ENST00000421459 ZNF471Q9BX82 626 aaPredicted RBP5.32□□□□□ -1.56
VIM-202ENST00000421459 SAMD10Q9BYL1 202 aa5.32□□□□□ -1.56
VIM-202ENST00000421459 KCNIP2Q9NS61 270 aa5.32□□□□□ -1.56
VIM-202ENST00000421459 BORCS7-ASMTA0A0B4J1R7 106 aa5.31□□□□□ -1.56
VIM-202ENST00000421459 GCGP01275 180 aa5.31□□□□□ -1.56
VIM-202ENST00000421459 TAS2R45P59539 299 aa5.31□□□□□ -1.56
VIM-202ENST00000421459 C14orf178Q8N769 122 aaPredicted RBP5.31□□□□□ -1.56
VIM-202ENST00000421459 SCGB1C1Q8TD33 95 aa5.31□□□□□ -1.56
VIM-202ENST00000421459 LINC00479Q96M42 142 aa5.31□□□□□ -1.56
VIM-202ENST00000421459 RBFOX3A6NFN3 312 aa5.3□□□□□ -1.56
VIM-202ENST00000421459 IFNA7P01567 189 aa5.3□□□□□ -1.56
VIM-202ENST00000421459 IGLV2-11P01706 119 aa5.3□□□□□ -1.56
VIM-202ENST00000421459 SEC11BP0C7V7 166 aa5.3□□□□□ -1.56
VIM-202ENST00000421459 ARL14EPLP0DKL9 152 aa5.3□□□□□ -1.56
VIM-202ENST00000421459 LINC00694P0DN24 101 aa5.3□□□□□ -1.56
VIM-202ENST00000421459 LAGE3Q14657 143 aa5.3□□□□□ -1.56
VIM-202ENST00000421459 ACOT6Q3I5F7 207 aaPredicted RBP5.3□□□□□ -1.56
VIM-202ENST00000421459 FAM74A1Q5RGS3 127 aa5.3□□□□□ -1.56
VIM-202ENST00000421459 EIF5AL1Q6IS14 154 aaKnown RBP5.3□□□□□ -1.56
VIM-202ENST00000421459 PRNTQ86SH4 94 aa5.3□□□□□ -1.56
VIM-202ENST00000421459 OR10G9Q8NGN4 311 aa5.3□□□□□ -1.56
VIM-202ENST00000421459 OR10G7Q8NGN6 311 aa5.3□□□□□ -1.56
VIM-202ENST00000421459 CIRBP-AS1Q8TBR5 109 aa5.3□□□□□ -1.56
VIM-202ENST00000421459 PARLQ9H300 379 aa5.3□□□□□ -1.56
VIM-202ENST00000421459 PSG8Q9UQ74 426 aa5.3□□□□□ -1.56
VIM-202ENST00000421459 IGKV2D-24A0A075B6R9 120 aa5.29□□□□□ -1.56
VIM-202ENST00000421459 TRAV8-3A0A0A6YYJ7 113 aa5.29□□□□□ -1.56
VIM-202ENST00000421459 TRAV34A0A0B4J273 112 aa5.29□□□□□ -1.56
VIM-202ENST00000421459 IGKV3D-20A0A0C4DH25 116 aa5.29□□□□□ -1.56
VIM-202ENST00000421459 A0A1W2PPV4 95 aa5.29□□□□□ -1.56
VIM-202ENST00000421459 IGLV2-8P01709 118 aa5.29□□□□□ -1.56
VIM-202ENST00000421459 TCRAP04437 139 aa5.29□□□□□ -1.56
VIM-202ENST00000421459 MGST1P10620 155 aaKnown RBP5.29□□□□□ -1.56
VIM-202ENST00000421459 HNRNPA3P51991 378 aaKnown RBP5.29□□□□□ -1.56
VIM-202ENST00000421459 UFSP1Q6NVU6 142 aa5.29□□□□□ -1.56
VIM-202ENST00000421459 PQLC2Q6ZP29 291 aa5.29□□□□□ -1.56
VIM-202ENST00000421459 OR2G3Q8NGZ4 309 aa5.29□□□□□ -1.56
VIM-202ENST00000421459 PSMG3Q9BT73 122 aaPredicted RBP5.29□□□□□ -1.56
VIM-202ENST00000421459 CHAC1Q9BUX1 264 aa5.29□□□□□ -1.56
VIM-202ENST00000421459 KLK12Q9UKR0 248 aa5.29□□□□□ -1.56
VIM-202ENST00000421459 GGTLC3B5MD39 225 aa5.28□□□□□ -1.56
VIM-202ENST00000421459 ATP6V0CP27449 155 aa5.28□□□□□ -1.56
VIM-202ENST00000421459 SUMO1P63165 101 aaKnown RBP5.28□□□□□ -1.56
VIM-202ENST00000421459 FLI1Q01543 452 aaPredicted RBP5.28□□□□□ -1.56
VIM-202ENST00000421459 CLLU1Q5K131 121 aa5.28□□□□□ -1.56
VIM-202ENST00000421459 SERTAD4-AS1Q5TG53 156 aa5.28□□□□□ -1.56
VIM-202ENST00000421459 DMRTA1Q5VZB9 504 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 276.4 ms