RNA–Protein interactions for RNA: ENST00000420047.1

SEMA3A-202, Transcript of semaphorin 3A, humanhuman

TSL 4

Gene SEMA3A, Length 553 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3A-202ENST00000420047 ZNF546Q86UE3 836 aa2.32□□□□□ -2.04
SEMA3A-202ENST00000420047 KRTAP11-1Q8IUC1 163 aa2.32□□□□□ -2.04
SEMA3A-202ENST00000420047 RXFP4Q8TDU9 374 aa2.32□□□□□ -2.04
SEMA3A-202ENST00000420047 TMEM263Q8WUH6 116 aaKnown RBP2.32□□□□□ -2.04
SEMA3A-202ENST00000420047 FXYD5Q96DB9 178 aa2.32□□□□□ -2.04
SEMA3A-202ENST00000420047 C16orf74Q96GX8 76 aa2.32□□□□□ -2.04
SEMA3A-202ENST00000420047 DNAJC30Q96LL9 226 aa2.32□□□□□ -2.04
SEMA3A-202ENST00000420047 GPR82Q96P67 336 aa2.32□□□□□ -2.04
SEMA3A-202ENST00000420047 SLC50A1Q9BRV3 221 aa2.32□□□□□ -2.04
SEMA3A-202ENST00000420047 PAXXQ9BUH6 204 aa2.32□□□□□ -2.04
SEMA3A-202ENST00000420047 NPCDR1Q9BY65 106 aa2.32□□□□□ -2.04
SEMA3A-202ENST00000420047 OR51M1Q9H341 326 aa2.32□□□□□ -2.04
SEMA3A-202ENST00000420047 LYRM2Q9NU23 88 aaPredicted RBP2.32□□□□□ -2.04
SEMA3A-202ENST00000420047 ZNF492Q9P255 531 aa2.32□□□□□ -2.04
SEMA3A-202ENST00000420047 CACFD1Q9UGQ2 172 aa2.32□□□□□ -2.04
SEMA3A-202ENST00000420047 FUT9Q9Y231 359 aa2.32□□□□□ -2.04
SEMA3A-202ENST00000420047 TRGV2A0A075B6R0 118 aa2.31□□□□□ -2.04
SEMA3A-202ENST00000420047 IGHV1OR15-1A0A075B7D0 117 aa2.31□□□□□ -2.04
SEMA3A-202ENST00000420047 TRAV34A0A0B4J273 112 aa2.31□□□□□ -2.04
SEMA3A-202ENST00000420047 FNDC10F2Z333 226 aa2.31□□□□□ -2.04
SEMA3A-202ENST00000420047 SPINK4O60575 86 aa2.31□□□□□ -2.04
SEMA3A-202ENST00000420047 MPDU1O75352 247 aa2.31□□□□□ -2.04
SEMA3A-202ENST00000420047 UPK1BO75841 260 aa2.31□□□□□ -2.04
SEMA3A-202ENST00000420047 NXPH4O95158 308 aa2.31□□□□□ -2.04
SEMA3A-202ENST00000420047 M6PRP20645 277 aa2.31□□□□□ -2.04
SEMA3A-202ENST00000420047 S100A11P31949 105 aa2.31□□□□□ -2.04
SEMA3A-202ENST00000420047 LEPP41159 167 aa2.31□□□□□ -2.04
SEMA3A-202ENST00000420047 CRYBA4P53673 196 aa2.31□□□□□ -2.04
SEMA3A-202ENST00000420047 XGP55808 180 aa2.31□□□□□ -2.04
SEMA3A-202ENST00000420047 DEFA3P59666 94 aa2.31□□□□□ -2.04
SEMA3A-202ENST00000420047 RAB2AP61019 212 aa2.31□□□□□ -2.04
SEMA3A-202ENST00000420047 RAB31Q13636 194 aa2.31□□□□□ -2.04
SEMA3A-202ENST00000420047 TMEM183BQ1AE95 376 aa2.31□□□□□ -2.04
SEMA3A-202ENST00000420047 LINC01620Q4KN68 170 aa2.31□□□□□ -2.04
SEMA3A-202ENST00000420047 ZNF493Q6ZR52 646 aa2.31□□□□□ -2.04
SEMA3A-202ENST00000420047 Q6ZRN7 208 aaPredicted RBP2.31□□□□□ -2.04
SEMA3A-202ENST00000420047 WFDC10BQ8IUB3 73 aa2.31□□□□□ -2.04
SEMA3A-202ENST00000420047 TMEM183AQ8IXX5 376 aa2.31□□□□□ -2.04
SEMA3A-202ENST00000420047 EIF4E3Q8N5X7 224 aaKnown RBP2.31□□□□□ -2.04
SEMA3A-202ENST00000420047 C15orf53Q8NAA6 179 aa2.31□□□□□ -2.04
SEMA3A-202ENST00000420047 OR1L4Q8NGR5 311 aa2.31□□□□□ -2.04
SEMA3A-202ENST00000420047 PPP1R1CQ8WVI7 109 aa2.31□□□□□ -2.04
SEMA3A-202ENST00000420047 FAM210BQ96KR6 192 aa2.31□□□□□ -2.04
SEMA3A-202ENST00000420047 GGACTQ9BVM4 153 aa2.31□□□□□ -2.04
SEMA3A-202ENST00000420047 WDR61Q9GZS3 305 aaKnown RBP2.31□□□□□ -2.04
SEMA3A-202ENST00000420047 Q9H3A6 140 aa2.31□□□□□ -2.04
SEMA3A-202ENST00000420047 JPT2Q9H910 190 aa2.31□□□□□ -2.04
SEMA3A-202ENST00000420047 NAGKQ9UJ70 344 aa2.31□□□□□ -2.04
SEMA3A-202ENST00000420047 DNAH5Q8TE73 4624 aa2.31□□□□□ -2.04
SEMA3A-202ENST00000420047 APOBP04114 4563 aaKnown RBP2.3□□□□□ -2.04
SEMA3A-202ENST00000420047 IGLV9-49A0A0B4J1Y8 123 aa2.3□□□□□ -2.04
SEMA3A-202ENST00000420047 TRGV4A0A0C4DH28 118 aa2.3□□□□□ -2.04
SEMA3A-202ENST00000420047 PGPEP1LA6NFU8 196 aa2.3□□□□□ -2.04
SEMA3A-202ENST00000420047 C9JCJ5 164 aa2.3□□□□□ -2.04
SEMA3A-202ENST00000420047 SMLR1H3BR10 107 aa2.3□□□□□ -2.04
SEMA3A-202ENST00000420047 K7EQD1 137 aa2.3□□□□□ -2.04
SEMA3A-202ENST00000420047 LECT2O14960 151 aa2.3□□□□□ -2.04
SEMA3A-202ENST00000420047 SIVA1O15304 175 aa2.3□□□□□ -2.04
SEMA3A-202ENST00000420047 OR7C2O60412 319 aa2.3□□□□□ -2.04
SEMA3A-202ENST00000420047 MPC2O95563 127 aa2.3□□□□□ -2.04
SEMA3A-202ENST00000420047 IGHV3-30P01768 117 aa2.3□□□□□ -2.04
SEMA3A-202ENST00000420047 IGHV3-33P01772 117 aa2.3□□□□□ -2.04
SEMA3A-202ENST00000420047 SLC25A5P05141 298 aaKnown RBP2.3□□□□□ -2.04
SEMA3A-202ENST00000420047 IGHV3-30-3P0DP02 117 aa2.3□□□□□ -2.04
SEMA3A-202ENST00000420047 IGHV3-30-5P0DP03 117 aa2.3□□□□□ -2.04
SEMA3A-202ENST00000420047 PVALBP20472 110 aaPredicted RBP2.3□□□□□ -2.04
SEMA3A-202ENST00000420047 ZNF138P52744 262 aa2.3□□□□□ -2.04
SEMA3A-202ENST00000420047 TCL1AP56279 114 aa2.3□□□□□ -2.04
SEMA3A-202ENST00000420047 ZNF415Q09FC8 603 aa2.3□□□□□ -2.04
SEMA3A-202ENST00000420047 DAZ2Q13117 558 aaKnown RBP2.3□□□□□ -2.04
SEMA3A-202ENST00000420047 ASAH1Q13510 395 aa2.3□□□□□ -2.04
SEMA3A-202ENST00000420047 WFDC2Q14508 124 aa2.3□□□□□ -2.04
SEMA3A-202ENST00000420047 ATP6V1FQ16864 119 aa2.3□□□□□ -2.04
SEMA3A-202ENST00000420047 HIGD2BQ4VC39 106 aa2.3□□□□□ -2.04
SEMA3A-202ENST00000420047 TMEM256Q8N2U0 113 aa2.3□□□□□ -2.04
SEMA3A-202ENST00000420047 OR10G4Q8NGN3 311 aa2.3□□□□□ -2.04
SEMA3A-202ENST00000420047 ENKURQ8TC29 256 aa2.3□□□□□ -2.04
SEMA3A-202ENST00000420047 DEDD2Q8WXF8 326 aa2.3□□□□□ -2.04
SEMA3A-202ENST00000420047 SLC25A31Q9H0C2 315 aa2.3□□□□□ -2.04
SEMA3A-202ENST00000420047 SH3BGRL3Q9H299 93 aa2.3□□□□□ -2.04
SEMA3A-202ENST00000420047 TMEM14CQ9P0S9 112 aa2.3□□□□□ -2.04
SEMA3A-202ENST00000420047 MBD2Q9UBB5 411 aa2.3□□□□□ -2.04
SEMA3A-202ENST00000420047 HHLA3Q9XRX5 114 aa2.3□□□□□ -2.04
SEMA3A-202ENST00000420047 MRPS16Q9Y3D3 137 aaKnown RBP2.3□□□□□ -2.04
SEMA3A-202ENST00000420047 HSPB11Q9Y547 144 aa2.3□□□□□ -2.04
SEMA3A-202ENST00000420047 PKHD1P08F94 4074 aa2.3□□□□□ -2.04
SEMA3A-202ENST00000420047 FAT1Q14517 4588 aa2.3□□□□□ -2.04
SEMA3A-202ENST00000420047 TEX48A0A1B0GUV7 120 aa2.29□□□□□ -2.04
SEMA3A-202ENST00000420047 SSNA1O43805 119 aa2.29□□□□□ -2.04
SEMA3A-202ENST00000420047 C1QBP02746 253 aa2.29□□□□□ -2.04
SEMA3A-202ENST00000420047 TYMSP04818 313 aa2.29□□□□□ -2.04
SEMA3A-202ENST00000420047 CRISP2P16562 243 aa2.29□□□□□ -2.04
SEMA3A-202ENST00000420047 CXCL2P19875 107 aa2.29□□□□□ -2.04
SEMA3A-202ENST00000420047 RPL12P30050 165 aaKnown RBP2.29□□□□□ -2.04
SEMA3A-202ENST00000420047 FGF8P55075 233 aaPredicted RBP2.29□□□□□ -2.04
SEMA3A-202ENST00000420047 SSTP61278 116 aa2.29□□□□□ -2.04
SEMA3A-202ENST00000420047 ZNF266Q14584 549 aa2.29□□□□□ -2.04
SEMA3A-202ENST00000420047 GUK1Q16774 197 aa2.29□□□□□ -2.04
SEMA3A-202ENST00000420047 SOHLH1Q5JUK2 328 aa2.29□□□□□ -2.04
SEMA3A-202ENST00000420047 TMEM78Q5T7P6 136 aa2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms