RNA–Protein interactions for RNA: ENST00000420009.5

TNFAIP3-202, Transcript of TNF alpha induced protein 3, humanhuman

TSL 3

Gene TNFAIP3, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-202ENST00000420009 IL7P13232 177 aa6.64□□□□□ -1.35
TNFAIP3-202ENST00000420009 RPL37AP61513 92 aaKnown RBP6.64□□□□□ -1.35
TNFAIP3-202ENST00000420009 RAB32Q13637 225 aa6.64□□□□□ -1.35
TNFAIP3-202ENST00000420009 DAZAP1Q96EP5 407 aaKnown RBP6.64□□□□□ -1.35
TNFAIP3-202ENST00000420009 TVP23CQ96ET8 276 aa6.64□□□□□ -1.35
TNFAIP3-202ENST00000420009 KCNS1Q96KK3 526 aa6.64□□□□□ -1.35
TNFAIP3-202ENST00000420009 KCNIP2Q9NS61 270 aa6.64□□□□□ -1.35
TNFAIP3-202ENST00000420009 CENPXA8MT69 81 aa6.63□□□□□ -1.35
TNFAIP3-202ENST00000420009 GGTLC3B5MD39 225 aa6.63□□□□□ -1.35
TNFAIP3-202ENST00000420009 F6UZH7 168 aa6.63□□□□□ -1.35
TNFAIP3-202ENST00000420009 ASB13Q8WXK3 278 aa6.63□□□□□ -1.35
TNFAIP3-202ENST00000420009 RMI2Q96E14 147 aa6.63□□□□□ -1.35
TNFAIP3-202ENST00000420009 DNAJC30Q96LL9 226 aa6.63□□□□□ -1.35
TNFAIP3-202ENST00000420009 C9orf85Q96MD7 179 aa6.63□□□□□ -1.35
TNFAIP3-202ENST00000420009 SH3BGRL3Q9H299 93 aa6.63□□□□□ -1.35
TNFAIP3-202ENST00000420009 NHLH2Q02577 135 aa6.62□□□□□ -1.35
TNFAIP3-202ENST00000420009 ZNF506Q5JVG8 444 aa6.62□□□□□ -1.35
TNFAIP3-202ENST00000420009 OR5C1Q8NGR4 320 aa6.62□□□□□ -1.35
TNFAIP3-202ENST00000420009 PTH2Q96A98 100 aa6.62□□□□□ -1.35
TNFAIP3-202ENST00000420009 SEC22CQ9BRL7 303 aa6.62□□□□□ -1.35
TNFAIP3-202ENST00000420009 WDR61Q9GZS3 305 aaKnown RBP6.62□□□□□ -1.35
TNFAIP3-202ENST00000420009 TREM1Q9NP99 234 aa6.62□□□□□ -1.35
TNFAIP3-202ENST00000420009 OTORQ9NRC9 128 aa6.62□□□□□ -1.35
TNFAIP3-202ENST00000420009 C11orf21Q9P2W6 132 aa6.62□□□□□ -1.35
TNFAIP3-202ENST00000420009 A0A087WWC5 75 aa6.61□□□□□ -1.35
TNFAIP3-202ENST00000420009 TRAV8-1A0A0A6YYK1 113 aa6.61□□□□□ -1.35
TNFAIP3-202ENST00000420009 A0A1B0GVG6 124 aa6.61□□□□□ -1.35
TNFAIP3-202ENST00000420009 PLA2G10O15496 165 aa6.61□□□□□ -1.35
TNFAIP3-202ENST00000420009 KHDC3LQ587J8 217 aa6.61□□□□□ -1.35
TNFAIP3-202ENST00000420009 LCE5AQ5TCM9 118 aa6.61□□□□□ -1.35
TNFAIP3-202ENST00000420009 ATRAIDQ6UW56 229 aa6.61□□□□□ -1.35
TNFAIP3-202ENST00000420009 GOLT1AQ6ZVE7 132 aa6.61□□□□□ -1.35
TNFAIP3-202ENST00000420009 ARL6IP6Q8N6S5 226 aa6.61□□□□□ -1.35
TNFAIP3-202ENST00000420009 CYB561D1Q8N8Q1 229 aa6.61□□□□□ -1.35
TNFAIP3-202ENST00000420009 HYLS1Q96M11 299 aa6.61□□□□□ -1.35
TNFAIP3-202ENST00000420009 IGKV2D-24A0A075B6R9 120 aa6.6□□□□□ -1.35
TNFAIP3-202ENST00000420009 GAGE12JA6NER3 117 aa6.6□□□□□ -1.35
TNFAIP3-202ENST00000420009 PGPEP1LA6NFU8 196 aa6.6□□□□□ -1.35
TNFAIP3-202ENST00000420009 GAGE1Q13065 139 aa6.6□□□□□ -1.35
TNFAIP3-202ENST00000420009 GAGE4Q13068 117 aa6.6□□□□□ -1.35
TNFAIP3-202ENST00000420009 GAGE5Q13069 117 aa6.6□□□□□ -1.35
TNFAIP3-202ENST00000420009 RGS21Q2M5E4 152 aa6.6□□□□□ -1.35
TNFAIP3-202ENST00000420009 GAGE13Q4V321 117 aa6.6□□□□□ -1.35
TNFAIP3-202ENST00000420009 Q6ZNX1 250 aa6.6□□□□□ -1.35
TNFAIP3-202ENST00000420009 NIT1Q86X76 327 aa6.6□□□□□ -1.35
TNFAIP3-202ENST00000420009 CMTM2Q8TAZ6 248 aa6.6□□□□□ -1.35
TNFAIP3-202ENST00000420009 PARLQ9H300 379 aa6.6□□□□□ -1.35
TNFAIP3-202ENST00000420009 NUDT15Q9NV35 164 aa6.6□□□□□ -1.35
TNFAIP3-202ENST00000420009 Q9UF83 564 aa6.6□□□□□ -1.35
TNFAIP3-202ENST00000420009 RPH3ALQ9UNE2 315 aa6.6□□□□□ -1.35
TNFAIP3-202ENST00000420009 TRAV6A0A075B6T7 132 aa6.59□□□□□ -1.35
TNFAIP3-202ENST00000420009 PGPA6NDG6 321 aa6.59□□□□□ -1.35
TNFAIP3-202ENST00000420009 PTTG1O95997 202 aa6.59□□□□□ -1.35
TNFAIP3-202ENST00000420009 TCRBP04435 133 aa6.59□□□□□ -1.35
TNFAIP3-202ENST00000420009 SEC11BP0C7V7 166 aa6.59□□□□□ -1.35
TNFAIP3-202ENST00000420009 RNASE3P12724 160 aaKnown RBP6.59□□□□□ -1.35
TNFAIP3-202ENST00000420009 ZNF80P51504 273 aaPredicted RBP6.59□□□□□ -1.35
TNFAIP3-202ENST00000420009 TAS2R45P59539 299 aa6.59□□□□□ -1.35
TNFAIP3-202ENST00000420009 ZFP2Q6ZN57 461 aa6.59□□□□□ -1.35
TNFAIP3-202ENST00000420009 LINC00479Q96M42 142 aa6.59□□□□□ -1.35
TNFAIP3-202ENST00000420009 C17orf112F2Z3M2 114 aa6.58□□□□□ -1.36
TNFAIP3-202ENST00000420009 LYRM1O43325 122 aa6.58□□□□□ -1.36
TNFAIP3-202ENST00000420009 DEFA1P59665 94 aa6.58□□□□□ -1.36
TNFAIP3-202ENST00000420009 DEFA3P59666 94 aa6.58□□□□□ -1.36
TNFAIP3-202ENST00000420009 GNG5P63218 68 aa6.58□□□□□ -1.36
TNFAIP3-202ENST00000420009 FFAR4Q5NUL3 377 aa6.58□□□□□ -1.36
TNFAIP3-202ENST00000420009 FAM74A1Q5RGS3 127 aa6.58□□□□□ -1.36
TNFAIP3-202ENST00000420009 PIK3CD-AS1Q5SR53 167 aa6.58□□□□□ -1.36
TNFAIP3-202ENST00000420009 UFSP1Q6NVU6 142 aa6.58□□□□□ -1.36
TNFAIP3-202ENST00000420009 TMEM75Q8N9X5 138 aa6.58□□□□□ -1.36
TNFAIP3-202ENST00000420009 UBE2WQ96B02 151 aa6.58□□□□□ -1.36
TNFAIP3-202ENST00000420009 CHCHD7Q9BUK0 85 aa6.58□□□□□ -1.36
TNFAIP3-202ENST00000420009 NMES1Q9C002 83 aa6.58□□□□□ -1.36
TNFAIP3-202ENST00000420009 MBD2Q9UBB5 411 aa6.58□□□□□ -1.36
TNFAIP3-202ENST00000420009 KLK12Q9UKR0 248 aa6.58□□□□□ -1.36
TNFAIP3-202ENST00000420009 URGCP-MRPS24S4R325 110 aa6.58□□□□□ -1.36
TNFAIP3-202ENST00000420009 A8MWV9 139 aa6.57□□□□□ -1.36
TNFAIP3-202ENST00000420009 TAAR5O14804 337 aa6.57□□□□□ -1.36
TNFAIP3-202ENST00000420009 EIF3GO75821 320 aaKnown RBP eCLIP6.57□□□□□ -1.36
TNFAIP3-202ENST00000420009 C14orf177Q52M58 125 aa6.57□□□□□ -1.36
TNFAIP3-202ENST00000420009 Q6ZRU5 148 aa6.57□□□□□ -1.36
TNFAIP3-202ENST00000420009 C14orf178Q8N769 122 aaPredicted RBP6.57□□□□□ -1.36
TNFAIP3-202ENST00000420009 OR10G9Q8NGN4 311 aa6.57□□□□□ -1.36
TNFAIP3-202ENST00000420009 NDFIP1Q9BT67 221 aa6.57□□□□□ -1.36
TNFAIP3-202ENST00000420009 SAMD10Q9BYL1 202 aa6.57□□□□□ -1.36
TNFAIP3-202ENST00000420009 OR5AC2Q9NZP5 309 aa6.57□□□□□ -1.36
TNFAIP3-202ENST00000420009 SERTM2A0A1B0GWG4 89 aa6.56□□□□□ -1.36
TNFAIP3-202ENST00000420009 H0YIZ8 118 aa6.56□□□□□ -1.36
TNFAIP3-202ENST00000420009 GCGP01275 180 aa6.56□□□□□ -1.36
TNFAIP3-202ENST00000420009 FGF8P55075 233 aaPredicted RBP6.56□□□□□ -1.36
TNFAIP3-202ENST00000420009 PQLC2Q6ZP29 291 aa6.56□□□□□ -1.36
TNFAIP3-202ENST00000420009 OR2T35Q8NGX2 323 aa6.56□□□□□ -1.36
TNFAIP3-202ENST00000420009 SGK494Q96LW2 274 aa6.56□□□□□ -1.36
TNFAIP3-202ENST00000420009 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.56□□□□□ -1.36
TNFAIP3-202ENST00000420009 A0A087WX48 190 aa6.55□□□□□ -1.36
TNFAIP3-202ENST00000420009 PANO1I0J062 215 aa6.55□□□□□ -1.36
TNFAIP3-202ENST00000420009 ELOBQ15370 118 aa6.55□□□□□ -1.36
TNFAIP3-202ENST00000420009 MZT2BQ6NZ67 158 aa6.55□□□□□ -1.36
TNFAIP3-202ENST00000420009 hCG_2014768A0A024R1R8 64 aa6.54□□□□□ -1.36
TNFAIP3-202ENST00000420009 USP17L23D6RBM5 183 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 147.5 ms