RNA–Protein interactions for RNA: ENST00000417876.1

RFC4-204, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-204ENST00000417876 ESPL1Q14674 2120 aa3.44□□□□□ -1.86
RFC4-204ENST00000417876 UNC13CQ8NB66 2214 aa3.44□□□□□ -1.86
RFC4-204ENST00000417876 TRANK1O15050 2925 aa3.44□□□□□ -1.86
RFC4-204ENST00000417876 IGHV3-64DA0A0J9YX35 117 aa3.44□□□□□ -1.86
RFC4-204ENST00000417876 D6R8Y8 96 aa3.44□□□□□ -1.86
RFC4-204ENST00000417876 H3BMG7 143 aa3.44□□□□□ -1.86
RFC4-204ENST00000417876 CCL21O00585 134 aa3.44□□□□□ -1.86
RFC4-204ENST00000417876 NPYP01303 97 aa3.44□□□□□ -1.86
RFC4-204ENST00000417876 IGLV1-47P01700 117 aa3.44□□□□□ -1.86
RFC4-204ENST00000417876 MT-ATP8P03928 68 aa3.44□□□□□ -1.86
RFC4-204ENST00000417876 IGLC6P0CF74 106 aa3.44□□□□□ -1.86
RFC4-204ENST00000417876 FCER1GP30273 86 aa3.44□□□□□ -1.86
RFC4-204ENST00000417876 FABP6P51161 128 aa3.44□□□□□ -1.86
RFC4-204ENST00000417876 EDDM3AQ14507 147 aa3.44□□□□□ -1.86
RFC4-204ENST00000417876 MRPL51Q4U2R6 128 aaKnown RBP3.44□□□□□ -1.86
RFC4-204ENST00000417876 Q6ZUT4 128 aa3.44□□□□□ -1.86
RFC4-204ENST00000417876 LEAP2Q969E1 77 aa3.44□□□□□ -1.86
RFC4-204ENST00000417876 PRELID3AQ96N28 172 aa3.44□□□□□ -1.86
RFC4-204ENST00000417876 RASL11BQ9BPW5 248 aa3.44□□□□□ -1.86
RFC4-204ENST00000417876 CNFNQ9BYD5 112 aa3.44□□□□□ -1.86
RFC4-204ENST00000417876 RPUSD1Q9UJJ7 312 aaKnown RBP3.44□□□□□ -1.86
RFC4-204ENST00000417876 CYSLTR1Q9Y271 337 aa3.44□□□□□ -1.86
RFC4-204ENST00000417876 F11RQ9Y624 299 aaKnown RBP3.44□□□□□ -1.86
RFC4-204ENST00000417876 KNL1Q8NG31 2342 aa3.43□□□□□ -1.86
RFC4-204ENST00000417876 ATRXP46100 2492 aa3.43□□□□□ -1.86
RFC4-204ENST00000417876 TRAV8-1A0A0A6YYK1 113 aa3.43□□□□□ -1.86
RFC4-204ENST00000417876 TMEM213A2RRL7 107 aa3.43□□□□□ -1.86
RFC4-204ENST00000417876 K7EM74 188 aa3.43□□□□□ -1.86
RFC4-204ENST00000417876 M0QXV9 152 aa3.43□□□□□ -1.86
RFC4-204ENST00000417876 RBP4P02753 201 aa3.43□□□□□ -1.86
RFC4-204ENST00000417876 CCL4P13236 92 aa3.43□□□□□ -1.86
RFC4-204ENST00000417876 NMUP48645 174 aa3.43□□□□□ -1.86
RFC4-204ENST00000417876 UBE2D1P51668 147 aa3.43□□□□□ -1.86
RFC4-204ENST00000417876 KRTAP10-3P60369 221 aa3.43□□□□□ -1.86
RFC4-204ENST00000417876 UBE2D3P61077 147 aa3.43□□□□□ -1.86
RFC4-204ENST00000417876 UBE2D2P62837 147 aa3.43□□□□□ -1.86
RFC4-204ENST00000417876 ERHP84090 104 aaKnown RBP3.43□□□□□ -1.86
RFC4-204ENST00000417876 KIAA0087Q14695 138 aa3.43□□□□□ -1.86
RFC4-204ENST00000417876 MRPL23Q16540 153 aaKnown RBP3.43□□□□□ -1.86
RFC4-204ENST00000417876 SPRNQ5BIV9 151 aa3.43□□□□□ -1.86
RFC4-204ENST00000417876 LYZL1Q6UWQ5 148 aa3.43□□□□□ -1.86
RFC4-204ENST00000417876 AMN1Q8IY45 258 aa3.43□□□□□ -1.86
RFC4-204ENST00000417876 ORMDL3Q8N138 153 aa3.43□□□□□ -1.86
RFC4-204ENST00000417876 LYPD1Q8N2G4 141 aa3.43□□□□□ -1.86
RFC4-204ENST00000417876 OR10X1Q8NGY0 326 aa3.43□□□□□ -1.86
RFC4-204ENST00000417876 SRSF12Q8WXF0 261 aaKnown RBP3.43□□□□□ -1.86
RFC4-204ENST00000417876 HINT2Q9BX68 163 aa3.43□□□□□ -1.86
RFC4-204ENST00000417876 MRPL20Q9BYC9 149 aaKnown RBP3.43□□□□□ -1.86
RFC4-204ENST00000417876 TTTY12Q9BZ98 90 aa3.43□□□□□ -1.86
RFC4-204ENST00000417876 SLC25A39Q9BZJ4 359 aaPredicted RBP3.43□□□□□ -1.86
RFC4-204ENST00000417876 NHP2Q9NX24 153 aaKnown RBP3.43□□□□□ -1.86
RFC4-204ENST00000417876 XCL2Q9UBD3 114 aa3.43□□□□□ -1.86
RFC4-204ENST00000417876 SLC25A15Q9Y619 301 aa3.43□□□□□ -1.86
RFC4-204ENST00000417876 FREM1Q5H8C1 2179 aa3.43□□□□□ -1.86
RFC4-204ENST00000417876 DYSFO75923 2080 aa3.43□□□□□ -1.86
RFC4-204ENST00000417876 LAMA2P24043 3122 aaKnown RBP3.43□□□□□ -1.86
RFC4-204ENST00000417876 COL27A1Q8IZC6 1860 aaPredicted RBP3.43□□□□□ -1.86
RFC4-204ENST00000417876 C5orf42Q9H799 3197 aa3.42□□□□□ -1.86
RFC4-204ENST00000417876 TRBV19A0A075B6N1 114 aa3.42□□□□□ -1.86
RFC4-204ENST00000417876 H3BRN7 92 aa3.42□□□□□ -1.86
RFC4-204ENST00000417876 FCN3O75636 299 aa3.42□□□□□ -1.86
RFC4-204ENST00000417876 BRI3O95415 125 aa3.42□□□□□ -1.86
RFC4-204ENST00000417876 IGKCP01834 107 aa3.42□□□□□ -1.86
RFC4-204ENST00000417876 SPINK8P0C7L1 97 aa3.42□□□□□ -1.86
RFC4-204ENST00000417876 DNAH10OSP0CZ25 163 aa3.42□□□□□ -1.86
RFC4-204ENST00000417876 C10orf55Q5SWW7 151 aa3.42□□□□□ -1.86
RFC4-204ENST00000417876 DUX4L9Q6RFH8 374 aaPredicted RBP3.42□□□□□ -1.86
RFC4-204ENST00000417876 AMTNQ6UX39 209 aa3.42□□□□□ -1.86
RFC4-204ENST00000417876 GOLT1AQ6ZVE7 132 aa3.42□□□□□ -1.86
RFC4-204ENST00000417876 PRNTQ86SH4 94 aa3.42□□□□□ -1.86
RFC4-204ENST00000417876 LINC00311Q8N616 119 aa3.42□□□□□ -1.86
RFC4-204ENST00000417876 C8orf31Q8N9H6 132 aa3.42□□□□□ -1.86
RFC4-204ENST00000417876 MDS2Q8NDY4 140 aa3.42□□□□□ -1.86
RFC4-204ENST00000417876 GAFA1Q96PS6 74 aa3.42□□□□□ -1.86
RFC4-204ENST00000417876 HES7Q9BYE0 225 aa3.42□□□□□ -1.86
RFC4-204ENST00000417876 ZNRD1Q9P1U0 126 aa3.42□□□□□ -1.86
RFC4-204ENST00000417876 SDK2Q58EX2 2172 aa3.42□□□□□ -1.86
RFC4-204ENST00000417876 DNAH14Q0VDD8 3507 aa3.41□□□□□ -1.86
RFC4-204ENST00000417876 MKI67P46013 3256 aaKnown RBP3.41□□□□□ -1.86
RFC4-204ENST00000417876 IGHV3OR15-7A0A075B7D8 119 aa3.41□□□□□ -1.86
RFC4-204ENST00000417876 TRAV12-1A0A0B4J245 112 aa3.41□□□□□ -1.86
RFC4-204ENST00000417876 LOC389332A0A1B0GUA5 103 aa3.41□□□□□ -1.86
RFC4-204ENST00000417876 A8MU10 97 aa3.41□□□□□ -1.86
RFC4-204ENST00000417876 SH2D1AO60880 128 aa3.41□□□□□ -1.86
RFC4-204ENST00000417876 DPM2O94777 84 aa3.41□□□□□ -1.86
RFC4-204ENST00000417876 CECR9P0C854 216 aa3.41□□□□□ -1.86
RFC4-204ENST00000417876 SUB1P53999 127 aaKnown RBP eCLIP3.41□□□□□ -1.86
RFC4-204ENST00000417876 FXYD7P58549 80 aa3.41□□□□□ -1.86
RFC4-204ENST00000417876 Q6Q795 121 aa3.41□□□□□ -1.86
RFC4-204ENST00000417876 EXOC3-AS1Q8N2X6 119 aa3.41□□□□□ -1.86
RFC4-204ENST00000417876 Q8N8P6 123 aa3.41□□□□□ -1.86
RFC4-204ENST00000417876 PPDPFLQ8WWR9 84 aa3.41□□□□□ -1.86
RFC4-204ENST00000417876 SHANK2-AS3Q9BTD1 123 aa3.41□□□□□ -1.86
RFC4-204ENST00000417876 KRTAP4-4Q9BYR3 166 aa3.41□□□□□ -1.86
RFC4-204ENST00000417876 HIGD1AQ9Y241 93 aa3.41□□□□□ -1.86
RFC4-204ENST00000417876 DIDO1Q9BTC0 2240 aaKnown RBP3.41□□□□□ -1.86
RFC4-204ENST00000417876 CABIN1Q9Y6J0 2220 aa3.41□□□□□ -1.86
RFC4-204ENST00000417876 REV3LO60673 3130 aa3.41□□□□□ -1.86
RFC4-204ENST00000417876 MYO9BQ13459 2157 aa3.41□□□□□ -1.86
RFC4-204ENST00000417876 IGLV3-9A0A075B6K5 115 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms