RNA–Protein interactions for RNA: ENST00000417656.6

SKA1-203, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 2 BASIC

Gene SKA1, Length 1,095 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-203ENST00000417656 TRAV26-1A0A087WT03 109 aa8.74□□□□□ -1.01
SKA1-203ENST00000417656 A0A0J9YY99 117 aa8.74□□□□□ -1.01
SKA1-203ENST00000417656 C9JCJ5 164 aa8.74□□□□□ -1.01
SKA1-203ENST00000417656 SFTA3P0C7M3 94 aa8.74□□□□□ -1.01
SKA1-203ENST00000417656 XP32Q5T750 250 aa8.74□□□□□ -1.01
SKA1-203ENST00000417656 LGALS9CQ6DKI2 356 aa8.74□□□□□ -1.01
SKA1-203ENST00000417656 EIF5A2Q9GZV4 153 aaKnown RBP8.74□□□□□ -1.01
SKA1-203ENST00000417656 PARLQ9H300 379 aa8.74□□□□□ -1.01
SKA1-203ENST00000417656 TMEM250H0YL14 139 aa8.73□□□□□ -1.01
SKA1-203ENST00000417656 NUDT3O95989 172 aa8.73□□□□□ -1.01
SKA1-203ENST00000417656 CEBPGP53567 150 aa8.73□□□□□ -1.01
SKA1-203ENST00000417656 ZNF876PQ49A33 203 aa8.73□□□□□ -1.01
SKA1-203ENST00000417656 POM121L12Q8N7R1 296 aa8.73□□□□□ -1.01
SKA1-203ENST00000417656 C15orf53Q8NAA6 179 aa8.73□□□□□ -1.01
SKA1-203ENST00000417656 SMIM12Q96EX1 92 aa8.73□□□□□ -1.01
SKA1-203ENST00000417656 ZNF479Q96JC4 524 aa8.73□□□□□ -1.01
SKA1-203ENST00000417656 IL36BQ9NZH7 164 aa8.73□□□□□ -1.01
SKA1-203ENST00000417656 HYDINQ4G0P3 5121 aa8.73□□□□□ -1.01
SKA1-203ENST00000417656 NACAE9PAV3 2078 aa8.73□□□□□ -1.01
SKA1-203ENST00000417656 VPS13DQ5THJ4 4388 aa8.72□□□□□ -1.01
SKA1-203ENST00000417656 TRAV4A0A0B4J268 109 aa8.72□□□□□ -1.01
SKA1-203ENST00000417656 ARMS2P0C7Q2 107 aa8.72□□□□□ -1.01
SKA1-203ENST00000417656 DNLZQ5SXM8 178 aa8.72□□□□□ -1.01
SKA1-203ENST00000417656 ZNF575Q86XF7 245 aa8.72□□□□□ -1.01
SKA1-203ENST00000417656 TRGV4A0A0C4DH28 118 aa8.71□□□□□ -1.02
SKA1-203ENST00000417656 SRP19P09132 144 aaKnown RBP8.71□□□□□ -1.02
SKA1-203ENST00000417656 FHL2Q14192 279 aa8.71□□□□□ -1.02
SKA1-203ENST00000417656 OR4C5Q8NGB2 326 aa8.71□□□□□ -1.02
SKA1-203ENST00000417656 VSIG2Q96IQ7 327 aa8.71□□□□□ -1.02
SKA1-203ENST00000417656 C19orf71A6NCJ1 209 aa8.7□□□□□ -1.02
SKA1-203ENST00000417656 K7EN84 100 aa8.7□□□□□ -1.02
SKA1-203ENST00000417656 RS1O15537 224 aa8.7□□□□□ -1.02
SKA1-203ENST00000417656 CXCL1P09341 107 aa8.7□□□□□ -1.02
SKA1-203ENST00000417656 P0DMU3 169 aa8.7□□□□□ -1.02
SKA1-203ENST00000417656 FAM231AP0DMU4 169 aa8.7□□□□□ -1.02
SKA1-203ENST00000417656 FAM231CP0DMU5 169 aa8.7□□□□□ -1.02
SKA1-203ENST00000417656 UBE2DNLQ8IWF7 75 aa8.7□□□□□ -1.02
SKA1-203ENST00000417656 PTH2Q96A98 100 aa8.7□□□□□ -1.02
SKA1-203ENST00000417656 SCRT2Q9NQ03 307 aa8.7□□□□□ -1.02
SKA1-203ENST00000417656 H3BNG1 76 aa8.69□□□□□ -1.02
SKA1-203ENST00000417656 PAX4O43316 350 aa8.69□□□□□ -1.02
SKA1-203ENST00000417656 NDUFS6O75380 124 aaKnown RBP8.69□□□□□ -1.02
SKA1-203ENST00000417656 P01737 135 aa8.69□□□□□ -1.02
SKA1-203ENST00000417656 MED14OSP0DP75 135 aa8.69□□□□□ -1.02
SKA1-203ENST00000417656 CRYBA4P53673 196 aa8.69□□□□□ -1.02
SKA1-203ENST00000417656 CFAP126Q5VTH2 177 aa8.69□□□□□ -1.02
SKA1-203ENST00000417656 SYT8Q8NBV8 401 aa8.69□□□□□ -1.02
SKA1-203ENST00000417656 OR2D3Q8NGH3 330 aa8.69□□□□□ -1.02
SKA1-203ENST00000417656 OCC1Q8TAD7 63 aa8.69□□□□□ -1.02
SKA1-203ENST00000417656 DAZAP1Q96EP5 407 aaKnown RBP8.69□□□□□ -1.02
SKA1-203ENST00000417656 SMIM7Q9BQ49 75 aa8.69□□□□□ -1.02
SKA1-203ENST00000417656 BIN3Q9NQY0 253 aa8.69□□□□□ -1.02
SKA1-203ENST00000417656 PRO0255Q9UI72 69 aa8.69□□□□□ -1.02
SKA1-203ENST00000417656 PHLDA3Q9Y5J5 127 aa8.69□□□□□ -1.02
SKA1-203ENST00000417656 IGHV3-73A0A0B4J1V6 119 aa8.68□□□□□ -1.02
SKA1-203ENST00000417656 C9JQL5 133 aa8.68□□□□□ -1.02
SKA1-203ENST00000417656 M0R381 172 aa8.68□□□□□ -1.02
SKA1-203ENST00000417656 GZMBP10144 247 aa8.68□□□□□ -1.02
SKA1-203ENST00000417656 SRSF3P84103 164 aaKnown RBP8.68□□□□□ -1.02
SKA1-203ENST00000417656 ZFP82Q8N141 532 aa8.68□□□□□ -1.02
SKA1-203ENST00000417656 OR10AG1Q8NH19 301 aa8.68□□□□□ -1.02
SKA1-203ENST00000417656 JPT2Q9H910 190 aa8.68□□□□□ -1.02
SKA1-203ENST00000417656 HHLA3Q9XRX5 114 aa8.68□□□□□ -1.02
SKA1-203ENST00000417656 A0A096LPF7 62 aa8.67□□□□□ -1.02
SKA1-203ENST00000417656 MUC21A0A0G2JKD1 596 aa8.67□□□□□ -1.02
SKA1-203ENST00000417656 MUC21A0A140T8X8 626 aa8.67□□□□□ -1.02
SKA1-203ENST00000417656 ZNF727A8MUV8 499 aa8.67□□□□□ -1.02
SKA1-203ENST00000417656 A8MWV9 139 aa8.67□□□□□ -1.02
SKA1-203ENST00000417656 SNAI2O43623 268 aa8.67□□□□□ -1.02
SKA1-203ENST00000417656 GATA1P15976 413 aaPredicted RBP8.67□□□□□ -1.02
SKA1-203ENST00000417656 IFITM2Q01629 132 aa8.67□□□□□ -1.02
SKA1-203ENST00000417656 SLAQ13239 276 aa8.67□□□□□ -1.02
SKA1-203ENST00000417656 PIK3CD-AS1Q5SR53 167 aa8.67□□□□□ -1.02
SKA1-203ENST00000417656 RNASE7Q9H1E1 156 aaKnown RBP8.67□□□□□ -1.02
SKA1-203ENST00000417656 ICOSQ9Y6W8 199 aa8.67□□□□□ -1.02
SKA1-203ENST00000417656 LOC100131303A0A0U1RQF7 123 aa8.66□□□□□ -1.02
SKA1-203ENST00000417656 NXPH4O95158 308 aa8.66□□□□□ -1.02
SKA1-203ENST00000417656 OR5AL1P0C617 328 aa8.66□□□□□ -1.02
SKA1-203ENST00000417656 RPS20P60866 119 aaKnown RBP8.66□□□□□ -1.02
SKA1-203ENST00000417656 RAB14P61106 215 aa8.66□□□□□ -1.02
SKA1-203ENST00000417656 PEA15Q15121 130 aa8.66□□□□□ -1.02
SKA1-203ENST00000417656 NUDT10Q8NFP7 164 aa8.66□□□□□ -1.02
SKA1-203ENST00000417656 NUDT11Q96G61 164 aa8.66□□□□□ -1.02
SKA1-203ENST00000417656 SAMD10Q9BYL1 202 aa8.66□□□□□ -1.02
SKA1-203ENST00000417656 RPP21Q9H633 154 aaKnown RBP8.66□□□□□ -1.02
SKA1-203ENST00000417656 A0A087WWL8 130 aa8.65□□□□□ -1.02
SKA1-203ENST00000417656 IGLC6P0CF74 106 aa8.65□□□□□ -1.02
SKA1-203ENST00000417656 GYPEP15421 78 aa8.65□□□□□ -1.02
SKA1-203ENST00000417656 FAM74A4Q5TZK3 123 aa8.65□□□□□ -1.02
SKA1-203ENST00000417656 LINC01551Q86U37 167 aa8.65□□□□□ -1.02
SKA1-203ENST00000417656 FER1L6-AS1Q8NA97 138 aa8.65□□□□□ -1.02
SKA1-203ENST00000417656 TPPP3Q9BW30 176 aa8.65□□□□□ -1.02
SKA1-203ENST00000417656 SSBP4Q9BWG4 385 aaPredicted RBP8.65□□□□□ -1.02
SKA1-203ENST00000417656 LINC00588Q9Y4M8 146 aa8.65□□□□□ -1.02
SKA1-203ENST00000417656 LY96Q9Y6Y9 160 aa8.65□□□□□ -1.02
SKA1-203ENST00000417656 DNAH6Q9C0G6 4158 aa8.65□□□□□ -1.02
SKA1-203ENST00000417656 XKRY2A2RUG3 117 aa8.64□□□□□ -1.03
SKA1-203ENST00000417656 K7EQD1 137 aa8.64□□□□□ -1.03
SKA1-203ENST00000417656 CIDEAO60543 219 aa8.64□□□□□ -1.03
SKA1-203ENST00000417656 CCL18P55774 89 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms