RNA–Protein interactions for RNA: ENST00000417137.5

SMARCB1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 3

Gene SMARCB1, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-205ENST00000417137 NUDT3O95989 172 aa16.18■□□□□ 0.18
SMARCB1-205ENST00000417137 ARMS2P0C7Q2 107 aa16.18■□□□□ 0.18
SMARCB1-205ENST00000417137 PIK3CD-AS1Q5SR53 167 aa16.18■□□□□ 0.18
SMARCB1-205ENST00000417137 PRO0255Q9UI72 69 aa16.18■□□□□ 0.18
SMARCB1-205ENST00000417137 TRBV20OR9-2A0A075B6H5 130 aa16.17■□□□□ 0.18
SMARCB1-205ENST00000417137 A0A0J9YY99 117 aa16.17■□□□□ 0.18
SMARCB1-205ENST00000417137 PGPEP1LA6NFU8 196 aa16.17■□□□□ 0.18
SMARCB1-205ENST00000417137 H3BVH4 76 aa16.17■□□□□ 0.18
SMARCB1-205ENST00000417137 CXCL1P09341 107 aa16.17■□□□□ 0.18
SMARCB1-205ENST00000417137 CEBPGP53567 150 aa16.17■□□□□ 0.18
SMARCB1-205ENST00000417137 RAB14P61106 215 aa16.17■□□□□ 0.18
SMARCB1-205ENST00000417137 SYT8Q8NBV8 401 aa16.17■□□□□ 0.18
SMARCB1-205ENST00000417137 ZNF479Q96JC4 524 aa16.17■□□□□ 0.18
SMARCB1-205ENST00000417137 HHLA3Q9XRX5 114 aa16.17■□□□□ 0.18
SMARCB1-205ENST00000417137 FHL2Q14192 279 aa16.16■□□□□ 0.18
SMARCB1-205ENST00000417137 PHLDA3Q9Y5J5 127 aa16.16■□□□□ 0.18
SMARCB1-205ENST00000417137 EPPK1P58107 5090 aaKnown RBP16.15■□□□□ 0.18
SMARCB1-205ENST00000417137 PAX4O43316 350 aa16.15■□□□□ 0.18
SMARCB1-205ENST00000417137 SFTA3P0C7M3 94 aa16.15■□□□□ 0.18
SMARCB1-205ENST00000417137 PEA15Q15121 130 aa16.15■□□□□ 0.18
SMARCB1-205ENST00000417137 POM121L12Q8N7R1 296 aa16.15■□□□□ 0.18
SMARCB1-205ENST00000417137 RS1O15537 224 aa16.14■□□□□ 0.17
SMARCB1-205ENST00000417137 P01737 135 aa16.14■□□□□ 0.17
SMARCB1-205ENST00000417137 MED14OSP0DP75 135 aa16.14■□□□□ 0.17
SMARCB1-205ENST00000417137 RPS20P60866 119 aaKnown RBP16.14■□□□□ 0.17
SMARCB1-205ENST00000417137 RPL19P84098 196 aaKnown RBP16.14■□□□□ 0.17
SMARCB1-205ENST00000417137 ZNF575Q86XF7 245 aa16.14■□□□□ 0.17
SMARCB1-205ENST00000417137 OCC1Q8TAD7 63 aa16.14■□□□□ 0.17
SMARCB1-205ENST00000417137 SMDT1Q9H4I9 107 aa16.14■□□□□ 0.17
SMARCB1-205ENST00000417137 BIRC6Q9NR09 4857 aa16.13■□□□□ 0.17
SMARCB1-205ENST00000417137 SACSQ9NZJ4 4579 aa16.13■□□□□ 0.17
SMARCB1-205ENST00000417137 XKRY2A2RUG3 117 aa16.13■□□□□ 0.17
SMARCB1-205ENST00000417137 C19orf71A6NCJ1 209 aa16.13■□□□□ 0.17
SMARCB1-205ENST00000417137 A8MWV9 139 aa16.13■□□□□ 0.17
SMARCB1-205ENST00000417137 SRP19P09132 144 aaKnown RBP16.13■□□□□ 0.17
SMARCB1-205ENST00000417137 CFAP126Q5VTH2 177 aa16.13■□□□□ 0.17
SMARCB1-205ENST00000417137 UBE2DNLQ8IWF7 75 aa16.13■□□□□ 0.17
SMARCB1-205ENST00000417137 SCRT2Q9NQ03 307 aa16.13■□□□□ 0.17
SMARCB1-205ENST00000417137 PLECQ15149 4684 aaKnown RBP16.12■□□□□ 0.17
SMARCB1-205ENST00000417137 CRYBA4P53673 196 aa16.12■□□□□ 0.17
SMARCB1-205ENST00000417137 RNF212Q495C1 297 aa16.12■□□□□ 0.17
SMARCB1-205ENST00000417137 ZFP82Q8N141 532 aa16.12■□□□□ 0.17
SMARCB1-205ENST00000417137 OR2D3Q8NGH3 330 aa16.12■□□□□ 0.17
SMARCB1-205ENST00000417137 VSIG2Q96IQ7 327 aa16.12■□□□□ 0.17
SMARCB1-205ENST00000417137 SMIM7Q9BQ49 75 aa16.12■□□□□ 0.17
SMARCB1-205ENST00000417137 LY96Q9Y6Y9 160 aa16.12■□□□□ 0.17
SMARCB1-205ENST00000417137 DMRTA1Q5VZB9 504 aa16.11■□□□□ 0.17
SMARCB1-205ENST00000417137 ZNF727A8MUV8 499 aa16.1■□□□□ 0.17
SMARCB1-205ENST00000417137 CCL18P55774 89 aa16.1■□□□□ 0.17
SMARCB1-205ENST00000417137 ICOSQ9Y6W8 199 aa16.1■□□□□ 0.17
SMARCB1-205ENST00000417137 MUC4Q99102 2169 aa16.09■□□□□ 0.17
SMARCB1-205ENST00000417137 M0R381 172 aa16.09■□□□□ 0.17
SMARCB1-205ENST00000417137 OR5AL1P0C617 328 aa16.09■□□□□ 0.17
SMARCB1-205ENST00000417137 FAM74A3Q4VXF1 159 aa16.09■□□□□ 0.17
SMARCB1-205ENST00000417137 NUDT10Q8NFP7 164 aa16.09■□□□□ 0.17
SMARCB1-205ENST00000417137 NUDT11Q96G61 164 aa16.09■□□□□ 0.17
SMARCB1-205ENST00000417137 LYSTQ99698 3801 aa16.08■□□□□ 0.17
SMARCB1-205ENST00000417137 K7EN84 100 aa16.08■□□□□ 0.16
SMARCB1-205ENST00000417137 FAM3BP58499 235 aaPredicted RBP16.08■□□□□ 0.16
SMARCB1-205ENST00000417137 MRPL23Q16540 153 aaKnown RBP16.08■□□□□ 0.16
SMARCB1-205ENST00000417137 ZFP2Q6ZN57 461 aa16.08■□□□□ 0.16
SMARCB1-205ENST00000417137 SSBP4Q9BWG4 385 aaPredicted RBP16.08■□□□□ 0.16
SMARCB1-205ENST00000417137 SNAI2O43623 268 aa16.07■□□□□ 0.16
SMARCB1-205ENST00000417137 GATA1P15976 413 aaPredicted RBP16.07■□□□□ 0.16
SMARCB1-205ENST00000417137 DNAH1Q9P2D7 4330 aa16.07■□□□□ 0.16
SMARCB1-205ENST00000417137 A0A096LPF7 62 aa16.06■□□□□ 0.16
SMARCB1-205ENST00000417137 SPANXN1Q5VSR9 72 aa16.06■□□□□ 0.16
SMARCB1-205ENST00000417137 SFRP2Q96HF1 295 aa16.06■□□□□ 0.16
SMARCB1-205ENST00000417137 IGHV3-73A0A0B4J1V6 119 aa16.05■□□□□ 0.16
SMARCB1-205ENST00000417137 TRBV6-4A0A1B0GX49 114 aa16.05■□□□□ 0.16
SMARCB1-205ENST00000417137 RHODO00212 210 aa16.05■□□□□ 0.16
SMARCB1-205ENST00000417137 FER1L6-AS1Q8NA97 138 aa16.05■□□□□ 0.16
SMARCB1-205ENST00000417137 PRADC1Q9BSG0 188 aa16.05■□□□□ 0.16
SMARCB1-205ENST00000417137 RNASE7Q9H1E1 156 aaKnown RBP16.05■□□□□ 0.16
SMARCB1-205ENST00000417137 RPP21Q9H633 154 aaKnown RBP16.05■□□□□ 0.16
SMARCB1-205ENST00000417137 ALMS1Q8TCU4 4167 aa16.04■□□□□ 0.16
SMARCB1-205ENST00000417137 A0A1W2PPQ1 181 aa16.04■□□□□ 0.16
SMARCB1-205ENST00000417137 F2Z2F3 143 aa16.04■□□□□ 0.16
SMARCB1-205ENST00000417137 GYPEP15421 78 aa16.04■□□□□ 0.16
SMARCB1-205ENST00000417137 SRSF3P84103 164 aaKnown RBP16.04■□□□□ 0.16
SMARCB1-205ENST00000417137 TMEM241Q24JQ0 296 aa16.04■□□□□ 0.16
SMARCB1-205ENST00000417137 CLLU1Q5K131 121 aa16.04■□□□□ 0.16
SMARCB1-205ENST00000417137 FAM231DQ6ZW35 169 aa16.04■□□□□ 0.16
SMARCB1-205ENST00000417137 OR10AG1Q8NH19 301 aa16.04■□□□□ 0.16
SMARCB1-205ENST00000417137 TPPP3Q9BW30 176 aa16.04■□□□□ 0.16
SMARCB1-205ENST00000417137 JPT2Q9H910 190 aa16.04■□□□□ 0.16
SMARCB1-205ENST00000417137 C9JQL5 133 aa16.03■□□□□ 0.16
SMARCB1-205ENST00000417137 NXPH4O95158 308 aa16.03■□□□□ 0.16
SMARCB1-205ENST00000417137 GZMBP10144 247 aa16.03■□□□□ 0.16
SMARCB1-205ENST00000417137 RHOHQ15669 191 aa16.03■□□□□ 0.16
SMARCB1-205ENST00000417137 LINC01551Q86U37 167 aa16.03■□□□□ 0.16
SMARCB1-205ENST00000417137 K7EQD1 137 aa16.02■□□□□ 0.16
SMARCB1-205ENST00000417137 GATCO43716 136 aaKnown RBP16.02■□□□□ 0.16
SMARCB1-205ENST00000417137 IGLC6P0CF74 106 aa16.02■□□□□ 0.16
SMARCB1-205ENST00000417137 SRIP30626 198 aa16.02■□□□□ 0.16
SMARCB1-205ENST00000417137 ERVFC1-1P60608 527 aa16.02■□□□□ 0.16
SMARCB1-205ENST00000417137 NEGR1Q7Z3B1 354 aa16.02■□□□□ 0.16
SMARCB1-205ENST00000417137 SH2D6Q7Z4S9 175 aa16.02■□□□□ 0.16
SMARCB1-205ENST00000417137 SLC25A29Q8N8R3 303 aa16.02■□□□□ 0.16
SMARCB1-205ENST00000417137 CACNG7P62955 275 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 128.4 ms