RNA–Protein interactions for RNA: ENST00000413601.3

LIMS4-201, Transcript of LIM zinc finger domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene LIMS4, Length 1,215 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS4-201ENST00000413601 CFAP126Q5VTH2 177 aa10.18□□□□□ -0.78
LIMS4-201ENST00000413601 EIF5AL1Q6IS14 154 aaKnown RBP10.18□□□□□ -0.78
LIMS4-201ENST00000413601 NEGR1Q7Z3B1 354 aa10.18□□□□□ -0.78
LIMS4-201ENST00000413601 AKAP14Q86UN6 197 aa10.18□□□□□ -0.78
LIMS4-201ENST00000413601 C6orf223Q8N319 242 aa10.18□□□□□ -0.78
LIMS4-201ENST00000413601 NHLRC2Q8NBF2 726 aa10.18□□□□□ -0.78
LIMS4-201ENST00000413601 PCNPQ8WW12 178 aaKnown RBP10.18□□□□□ -0.78
LIMS4-201ENST00000413601 KRTAP1-5Q9BYS1 174 aa10.18□□□□□ -0.78
LIMS4-201ENST00000413601 IGHV3-73A0A0B4J1V6 119 aa10.17□□□□□ -0.78
LIMS4-201ENST00000413601 LOC100131303A0A0U1RQF7 123 aa10.17□□□□□ -0.78
LIMS4-201ENST00000413601 KRBOX1C9JBD0 128 aa10.17□□□□□ -0.78
LIMS4-201ENST00000413601 GATA1P15976 413 aaPredicted RBP10.17□□□□□ -0.78
LIMS4-201ENST00000413601 SRIP30626 198 aa10.17□□□□□ -0.78
LIMS4-201ENST00000413601 ASIPP42127 132 aa10.17□□□□□ -0.78
LIMS4-201ENST00000413601 RAB5CP51148 216 aa10.17□□□□□ -0.78
LIMS4-201ENST00000413601 ZNF674Q2M3X9 581 aa10.17□□□□□ -0.78
LIMS4-201ENST00000413601 PTH2Q96A98 100 aa10.17□□□□□ -0.78
LIMS4-201ENST00000413601 TRAV1-1A0A0B4J248 108 aa10.16□□□□□ -0.78
LIMS4-201ENST00000413601 GRIFINA4D1Z8 144 aa10.16□□□□□ -0.78
LIMS4-201ENST00000413601 SIVA1O15304 175 aa10.16□□□□□ -0.78
LIMS4-201ENST00000413601 NXPH4O95158 308 aa10.16□□□□□ -0.78
LIMS4-201ENST00000413601 SULT1A2P50226 295 aa10.16□□□□□ -0.78
LIMS4-201ENST00000413601 TTC32Q5I0X7 151 aa10.16□□□□□ -0.78
LIMS4-201ENST00000413601 SLC51BQ86UW2 128 aa10.16□□□□□ -0.78
LIMS4-201ENST00000413601 GNG13Q9P2W3 67 aa10.16□□□□□ -0.78
LIMS4-201ENST00000413601 DNAH2Q9P225 4427 aa10.16□□□□□ -0.78
LIMS4-201ENST00000413601 TMSB15BA0A087X1C1 80 aa10.15□□□□□ -0.78
LIMS4-201ENST00000413601 H3BVH4 76 aa10.15□□□□□ -0.78
LIMS4-201ENST00000413601 S100A9P06702 114 aaKnown RBP10.15□□□□□ -0.78
LIMS4-201ENST00000413601 ZNF575Q86XF7 245 aa10.15□□□□□ -0.78
LIMS4-201ENST00000413601 SLC25A29Q8N8R3 303 aa10.15□□□□□ -0.78
LIMS4-201ENST00000413601 TXNDC17Q9BRA2 123 aa10.15□□□□□ -0.78
LIMS4-201ENST00000413601 MANBALQ9NQG1 85 aa10.15□□□□□ -0.78
LIMS4-201ENST00000413601 IL36BQ9NZH7 164 aa10.15□□□□□ -0.78
LIMS4-201ENST00000413601 A0A1W2PPQ1 181 aa10.14□□□□□ -0.79
LIMS4-201ENST00000413601 CIDEAO60543 219 aa10.14□□□□□ -0.79
LIMS4-201ENST00000413601 ARMS2P0C7Q2 107 aa10.14□□□□□ -0.79
LIMS4-201ENST00000413601 TNP2Q05952 138 aa10.14□□□□□ -0.79
LIMS4-201ENST00000413601 LINC01559Q495D7 138 aa10.14□□□□□ -0.79
LIMS4-201ENST00000413601 DNLZQ5SXM8 178 aa10.14□□□□□ -0.79
LIMS4-201ENST00000413601 BAGE2Q86Y30 109 aa10.14□□□□□ -0.79
LIMS4-201ENST00000413601 C9orf62Q8N4C0 152 aa10.14□□□□□ -0.79
LIMS4-201ENST00000413601 TEX46H3BTG2 121 aa10.13□□□□□ -0.79
LIMS4-201ENST00000413601 MLST8Q9BVC4 326 aa10.13□□□□□ -0.79
LIMS4-201ENST00000413601 PARLQ9H300 379 aa10.13□□□□□ -0.79
LIMS4-201ENST00000413601 JPT2Q9H910 190 aa10.13□□□□□ -0.79
LIMS4-201ENST00000413601 DNAH17Q9UFH2 4485 aa10.13□□□□□ -0.79
LIMS4-201ENST00000413601 FAT2Q9NYQ8 4349 aa10.12□□□□□ -0.79
LIMS4-201ENST00000413601 TRBV6-4A0A1B0GX49 114 aa10.12□□□□□ -0.79
LIMS4-201ENST00000413601 A8MWV9 139 aa10.12□□□□□ -0.79
LIMS4-201ENST00000413601 RPL35P42766 123 aaKnown RBP10.12□□□□□ -0.79
LIMS4-201ENST00000413601 PIK3CD-AS1Q5SR53 167 aa10.12□□□□□ -0.79
LIMS4-201ENST00000413601 PRADC1Q9BSG0 188 aa10.12□□□□□ -0.79
LIMS4-201ENST00000413601 DERL1Q9BUN8 251 aa10.12□□□□□ -0.79
LIMS4-201ENST00000413601 HECTD4Q9Y4D8 3996 aa10.11□□□□□ -0.79
LIMS4-201ENST00000413601 MGST1P10620 155 aaKnown RBP10.11□□□□□ -0.79
LIMS4-201ENST00000413601 RPL19P84098 196 aaKnown RBP10.11□□□□□ -0.79
LIMS4-201ENST00000413601 RHOHQ15669 191 aa10.11□□□□□ -0.79
LIMS4-201ENST00000413601 Q6ZSN1 163 aa10.11□□□□□ -0.79
LIMS4-201ENST00000413601 SH2D6Q7Z4S9 175 aa10.11□□□□□ -0.79
LIMS4-201ENST00000413601 WFDC10BQ8IUB3 73 aa10.11□□□□□ -0.79
LIMS4-201ENST00000413601 SYT8Q8NBV8 401 aa10.11□□□□□ -0.79
LIMS4-201ENST00000413601 C11orf52Q96A22 123 aa10.11□□□□□ -0.79
LIMS4-201ENST00000413601 SAMD10Q9BYL1 202 aa10.11□□□□□ -0.79
LIMS4-201ENST00000413601 PHLDA3Q9Y5J5 127 aa10.11□□□□□ -0.79
LIMS4-201ENST00000413601 A0A1B0GVG6 124 aa10.1□□□□□ -0.79
LIMS4-201ENST00000413601 PRR27Q6MZM9 219 aa10.1□□□□□ -0.79
LIMS4-201ENST00000413601 ZFP2Q6ZN57 461 aa10.1□□□□□ -0.79
LIMS4-201ENST00000413601 SCRT2Q9NQ03 307 aa10.1□□□□□ -0.79
LIMS4-201ENST00000413601 M0R381 172 aa10.09□□□□□ -0.79
LIMS4-201ENST00000413601 LINC00315P59091 139 aa10.09□□□□□ -0.79
LIMS4-201ENST00000413601 MEF2BQ02080 365 aaPredicted RBP10.09□□□□□ -0.79
LIMS4-201ENST00000413601 UFSP1Q6NVU6 142 aa10.09□□□□□ -0.79
LIMS4-201ENST00000413601 LY96Q9Y6Y9 160 aa10.09□□□□□ -0.79
LIMS4-201ENST00000413601 IFNA1P01562 189 aa10.08□□□□□ -0.8
LIMS4-201ENST00000413601 CENPWQ5EE01 88 aa10.08□□□□□ -0.8
LIMS4-201ENST00000413601 FAM74A4Q5TZK3 123 aa10.08□□□□□ -0.8
LIMS4-201ENST00000413601 TNFRSF18Q9Y5U5 241 aa10.08□□□□□ -0.8
LIMS4-201ENST00000413601 PKD1P98161 4303 aa10.07□□□□□ -0.8
LIMS4-201ENST00000413601 A0A087WWL8 130 aa10.07□□□□□ -0.8
LIMS4-201ENST00000413601 RAB19A4D1S5 217 aa10.07□□□□□ -0.8
LIMS4-201ENST00000413601 BCL2P10415 239 aa10.07□□□□□ -0.8
LIMS4-201ENST00000413601 BTF3P20290 206 aaKnown RBP10.07□□□□□ -0.8
LIMS4-201ENST00000413601 TIRAPP58753 221 aa10.07□□□□□ -0.8
LIMS4-201ENST00000413601 ALKAL2Q6UX46 152 aa10.07□□□□□ -0.8
LIMS4-201ENST00000413601 ZFP82Q8N141 532 aa10.07□□□□□ -0.8
LIMS4-201ENST00000413601 C14orf178Q8N769 122 aaPredicted RBP10.07□□□□□ -0.8
LIMS4-201ENST00000413601 SFRP2Q96HF1 295 aa10.07□□□□□ -0.8
LIMS4-201ENST00000413601 Q9UF83 564 aa10.07□□□□□ -0.8
LIMS4-201ENST00000413601 TRAV9-2A0A087WT02 112 aa10.06□□□□□ -0.8
LIMS4-201ENST00000413601 GAGE12JA6NER3 117 aa10.06□□□□□ -0.8
LIMS4-201ENST00000413601 RHODO00212 210 aa10.06□□□□□ -0.8
LIMS4-201ENST00000413601 PDE6DO43924 150 aa10.06□□□□□ -0.8
LIMS4-201ENST00000413601 IGLV2-8P01709 118 aa10.06□□□□□ -0.8
LIMS4-201ENST00000413601 DNAH10OSP0CZ25 163 aa10.06□□□□□ -0.8
LIMS4-201ENST00000413601 MED14OSP0DP75 135 aa10.06□□□□□ -0.8
LIMS4-201ENST00000413601 NKX2-5P52952 324 aaPredicted RBP10.06□□□□□ -0.8
LIMS4-201ENST00000413601 GAGE1Q13065 139 aa10.06□□□□□ -0.8
LIMS4-201ENST00000413601 GAGE4Q13068 117 aa10.06□□□□□ -0.8
LIMS4-201ENST00000413601 GAGE5Q13069 117 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms