RNA–Protein interactions for RNA: ENST00000413473.6

TTC39A-208, Transcript of tetratricopeptide repeat domain 39A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TTC39A, Length 2,718 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-208ENST00000413473 RNASE3P12724 160 aaKnown RBP11.29□□□□□ -0.6
TTC39A-208ENST00000413473 OR5A1Q8NGJ0 315 aa11.29□□□□□ -0.6
TTC39A-208ENST00000413473 PHLDA1Q8WV24 401 aaPredicted RBP11.29□□□□□ -0.6
TTC39A-208ENST00000413473 CHTOPQ9Y3Y2 248 aaKnown RBP11.29□□□□□ -0.6
TTC39A-208ENST00000413473 BRI3O95415 125 aa11.28□□□□□ -0.6
TTC39A-208ENST00000413473 C10orf105Q8TEF2 133 aa11.28□□□□□ -0.6
TTC39A-208ENST00000413473 SPOCK3Q9BQ16 436 aa11.28□□□□□ -0.6
TTC39A-208ENST00000413473 CELSR2Q9HCU4 2923 aa11.28□□□□□ -0.6
TTC39A-208ENST00000413473 C2orf66Q6UXQ4 117 aa11.28□□□□□ -0.6
TTC39A-208ENST00000413473 NEXN-AS1Q8NBZ9 246 aa11.28□□□□□ -0.6
TTC39A-208ENST00000413473 RNF223E7ERA6 249 aa11.27□□□□□ -0.61
TTC39A-208ENST00000413473 EDN2P20800 178 aa11.27□□□□□ -0.61
TTC39A-208ENST00000413473 APRG1Q8IVJ8 170 aa11.27□□□□□ -0.61
TTC39A-208ENST00000413473 PKD1L2Q7Z442 2459 aa11.27□□□□□ -0.61
TTC39A-208ENST00000413473 MED14OSP0DP75 135 aa11.27□□□□□ -0.61
TTC39A-208ENST00000413473 CCL19Q99731 98 aa11.27□□□□□ -0.61
TTC39A-208ENST00000413473 DAZ1Q9NQZ3 744 aaKnown RBP11.27□□□□□ -0.61
TTC39A-208ENST00000413473 SORL1Q92673 2214 aa11.26□□□□□ -0.61
TTC39A-208ENST00000413473 DOPEY2Q9Y3R5 2298 aa11.26□□□□□ -0.61
TTC39A-208ENST00000413473 SLC25A16P16260 332 aa11.26□□□□□ -0.61
TTC39A-208ENST00000413473 IGHV4-30-2A0A087WSY4 118 aa11.26□□□□□ -0.61
TTC39A-208ENST00000413473 IGLV1-40P01703 118 aa11.26□□□□□ -0.61
TTC39A-208ENST00000413473 NEGR1Q7Z3B1 354 aa11.26□□□□□ -0.61
TTC39A-208ENST00000413473 WFDC12Q8WWY7 111 aa11.26□□□□□ -0.61
TTC39A-208ENST00000413473 HIST1H4GQ99525 98 aa11.26□□□□□ -0.61
TTC39A-208ENST00000413473 CSTL1Q9H114 145 aa11.26□□□□□ -0.61
TTC39A-208ENST00000413473 PRORYQ9H606 182 aa11.26□□□□□ -0.61
TTC39A-208ENST00000413473 OR11H12B2RN74 326 aa11.25□□□□□ -0.61
TTC39A-208ENST00000413473 OR11H1Q8NG94 326 aa11.25□□□□□ -0.61
TTC39A-208ENST00000413473 OR11H2Q8NH07 326 aa11.25□□□□□ -0.61
TTC39A-208ENST00000413473 BAALCQ8WXS3 180 aa11.25□□□□□ -0.61
TTC39A-208ENST00000413473 FLNCQ14315 2725 aa11.25□□□□□ -0.61
TTC39A-208ENST00000413473 CFAP46Q8IYW2 2715 aa11.25□□□□□ -0.61
TTC39A-208ENST00000413473 CREBBPQ92793 2442 aa11.25□□□□□ -0.61
TTC39A-208ENST00000413473 TRBV7-9A0A0J9YWB2 115 aa11.25□□□□□ -0.61
TTC39A-208ENST00000413473 TAL2Q16559 108 aa11.25□□□□□ -0.61
TTC39A-208ENST00000413473 CLEC2AQ6UVW9 174 aa11.25□□□□□ -0.61
TTC39A-208ENST00000413473 PRSS29PA6NIE9 313 aa11.24□□□□□ -0.61
TTC39A-208ENST00000413473 ATP5J2P56134 94 aa11.24□□□□□ -0.61
TTC39A-208ENST00000413473 G3V4G9 280 aa11.24□□□□□ -0.61
TTC39A-208ENST00000413473 JPT2Q9H910 190 aa11.24□□□□□ -0.61
TTC39A-208ENST00000413473 USP9YO00507 2555 aaPredicted RBP11.24□□□□□ -0.61
TTC39A-208ENST00000413473 MYMXA0A1B0GTQ4 84 aa11.23□□□□□ -0.61
TTC39A-208ENST00000413473 IGLL5B9A064 214 aa11.23□□□□□ -0.61
TTC39A-208ENST00000413473 LINC00315P59091 139 aa11.23□□□□□ -0.61
TTC39A-208ENST00000413473 C12orf74Q32Q52 190 aa11.23□□□□□ -0.61
TTC39A-208ENST00000413473 DEFB104AQ8WTQ1 72 aa11.23□□□□□ -0.61
TTC39A-208ENST00000413473 KIF25-AS1Q9Y6Z4 181 aa11.23□□□□□ -0.61
TTC39A-208ENST00000413473 KLLNB2CW77 178 aa11.23□□□□□ -0.61
TTC39A-208ENST00000413473 PPP1R17O96001 155 aa11.23□□□□□ -0.61
TTC39A-208ENST00000413473 AVPP01185 164 aa11.23□□□□□ -0.61
TTC39A-208ENST00000413473 MSMBP08118 114 aa11.23□□□□□ -0.61
TTC39A-208ENST00000413473 COTL1Q14019 142 aa11.23□□□□□ -0.61
TTC39A-208ENST00000413473 TMEM95Q3KNT9 176 aa11.23□□□□□ -0.61
TTC39A-208ENST00000413473 FAM159AQ6UWV7 190 aa11.23□□□□□ -0.61
TTC39A-208ENST00000413473 E9PLD3 99 aa11.22□□□□□ -0.61
TTC39A-208ENST00000413473 NDUFS8O00217 210 aa11.22□□□□□ -0.61
TTC39A-208ENST00000413473 USP9XQ93008 2570 aaPredicted RBP11.22□□□□□ -0.61
TTC39A-208ENST00000413473 RIPPLY3P57055 190 aa11.22□□□□□ -0.61
TTC39A-208ENST00000413473 CRYBG3Q68DQ2 2970 aa11.22□□□□□ -0.61
TTC39A-208ENST00000413473 TRBV7-3A0A075B6L6 115 aa11.22□□□□□ -0.61
TTC39A-208ENST00000413473 DUSP14O95147 198 aaKnown RBP11.22□□□□□ -0.61
TTC39A-208ENST00000413473 NXPH4O95158 308 aa11.22□□□□□ -0.61
TTC39A-208ENST00000413473 POM121L12Q8N7R1 296 aa11.22□□□□□ -0.61
TTC39A-208ENST00000413473 DCANP1Q8TF63 244 aa11.22□□□□□ -0.61
TTC39A-208ENST00000413473 TRAV12-3A0A0B4J271 114 aa11.21□□□□□ -0.61
TTC39A-208ENST00000413473 ID1P41134 155 aa11.21□□□□□ -0.61
TTC39A-208ENST00000413473 CFHR3Q02985 330 aa11.21□□□□□ -0.61
TTC39A-208ENST00000413473 DOPEY1Q5JWR5 2465 aa11.21□□□□□ -0.62
TTC39A-208ENST00000413473 A0A087WWL8 130 aa11.21□□□□□ -0.62
TTC39A-208ENST00000413473 ZNF479Q96JC4 524 aa11.21□□□□□ -0.62
TTC39A-208ENST00000413473 PRADC1Q9BSG0 188 aa11.21□□□□□ -0.62
TTC39A-208ENST00000413473 CYSLTR1Q9Y271 337 aa11.21□□□□□ -0.62
TTC39A-208ENST00000413473 IGHV4OR15-8A0A075B7B6 117 aa11.2□□□□□ -0.62
TTC39A-208ENST00000413473 A0A087WW49 117 aa11.2□□□□□ -0.62
TTC39A-208ENST00000413473 K7EMT4 169 aa11.2□□□□□ -0.62
TTC39A-208ENST00000413473 CD7P09564 240 aa11.2□□□□□ -0.62
TTC39A-208ENST00000413473 LGALS1P09382 135 aaKnown RBP11.2□□□□□ -0.62
TTC39A-208ENST00000413473 RPL24P83731 157 aaKnown RBP11.2□□□□□ -0.62
TTC39A-208ENST00000413473 FOXI2Q6ZQN5 318 aa11.2□□□□□ -0.62
TTC39A-208ENST00000413473 F5H697 171 aa11.19□□□□□ -0.62
TTC39A-208ENST00000413473 CRYGDP07320 174 aa11.19□□□□□ -0.62
TTC39A-208ENST00000413473 SUMO4Q6EEV6 95 aa11.19□□□□□ -0.62
TTC39A-208ENST00000413473 TSHBP01222 138 aa11.19□□□□□ -0.62
TTC39A-208ENST00000413473 POLR2KP53803 58 aaKnown RBP11.19□□□□□ -0.62
TTC39A-208ENST00000413473 TP53TG1Q9Y2A0 90 aa11.19□□□□□ -0.62
TTC39A-208ENST00000413473 LINC01619G3V211 115 aa11.18□□□□□ -0.62
TTC39A-208ENST00000413473 SCGB2A2Q13296 93 aa11.18□□□□□ -0.62
TTC39A-208ENST00000413473 C10orf99Q6UWK7 81 aa11.18□□□□□ -0.62
TTC39A-208ENST00000413473 IGKV3-20P01619 116 aa11.18□□□□□ -0.62
TTC39A-208ENST00000413473 ZNF688P0C7X2 276 aa11.18□□□□□ -0.62
TTC39A-208ENST00000413473 ZFP2Q6ZN57 461 aa11.18□□□□□ -0.62
TTC39A-208ENST00000413473 ZNF815PA8K554 130 aa11.17□□□□□ -0.62
TTC39A-208ENST00000413473 EMP1P54849 157 aa11.17□□□□□ -0.62
TTC39A-208ENST00000413473 RPL39P62891 51 aaKnown RBP11.17□□□□□ -0.62
TTC39A-208ENST00000413473 CD300EQ496F6 205 aaPredicted RBP11.17□□□□□ -0.62
TTC39A-208ENST00000413473 MYO18BQ8IUG5 2567 aa11.17□□□□□ -0.62
TTC39A-208ENST00000413473 TEX48A0A1B0GUV7 120 aa11.17□□□□□ -0.62
TTC39A-208ENST00000413473 PSMB8P28062 276 aa11.17□□□□□ -0.62
TTC39A-208ENST00000413473 KLHL30-AS1Q8NEE0 82 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms