RNA–Protein interactions for RNA: ENST00000412061.3

BRCA1-204, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,312 nt, Biotype non stop decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-204ENST00000412061 TIAM1Q13009 1591 aa2.2□□□□□ -2.06
BRCA1-204ENST00000412061 NRKQ7Z2Y5 1582 aa2.2□□□□□ -2.06
BRCA1-204ENST00000412061 ZFYVE16Q7Z3T8 1539 aa2.2□□□□□ -2.06
BRCA1-204ENST00000412061 GAPVD1Q14C86 1478 aa2.2□□□□□ -2.06
BRCA1-204ENST00000412061 A0A1W2PRS3 328 aa2.2□□□□□ -2.06
BRCA1-204ENST00000412061 RNASE3P12724 160 aaKnown RBP2.2□□□□□ -2.06
BRCA1-204ENST00000412061 KRTAP10-10P60014 251 aa2.2□□□□□ -2.06
BRCA1-204ENST00000412061 HSD52Q0P140 79 aa2.2□□□□□ -2.06
BRCA1-204ENST00000412061 C9orf153Q5TBE3 101 aa2.2□□□□□ -2.06
BRCA1-204ENST00000412061 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.2□□□□□ -2.06
BRCA1-204ENST00000412061 REG4Q9BYZ8 158 aa2.2□□□□□ -2.06
BRCA1-204ENST00000412061 RPRMQ9NS64 109 aa2.2□□□□□ -2.06
BRCA1-204ENST00000412061 POLR1AO95602 1720 aaPredicted RBP2.2□□□□□ -2.06
BRCA1-204ENST00000412061 SCRIBQ14160 1630 aa2.2□□□□□ -2.06
BRCA1-204ENST00000412061 NKTRP30414 1462 aaKnown RBP2.2□□□□□ -2.06
BRCA1-204ENST00000412061 ANKRD36BQ8N2N9 1353 aa2.2□□□□□ -2.06
BRCA1-204ENST00000412061 TRAV30A0A087WSZ9 112 aa2.19□□□□□ -2.06
BRCA1-204ENST00000412061 H3BRM9 83 aa2.19□□□□□ -2.06
BRCA1-204ENST00000412061 NDUFB6O95139 128 aa2.19□□□□□ -2.06
BRCA1-204ENST00000412061 PIPP12273 146 aaPredicted RBP2.19□□□□□ -2.06
BRCA1-204ENST00000412061 IL7P13232 177 aa2.19□□□□□ -2.06
BRCA1-204ENST00000412061 POLR2JP52435 117 aaKnown RBP2.19□□□□□ -2.06
BRCA1-204ENST00000412061 SPANXN1Q5VSR9 72 aa2.19□□□□□ -2.06
BRCA1-204ENST00000412061 BRD3OSQ6XYD6 125 aa2.19□□□□□ -2.06
BRCA1-204ENST00000412061 Q6ZS92 163 aa2.19□□□□□ -2.06
BRCA1-204ENST00000412061 ACBD7Q8N6N7 88 aa2.19□□□□□ -2.06
BRCA1-204ENST00000412061 MCM3APO60318 1980 aa2.19□□□□□ -2.06
BRCA1-204ENST00000412061 FYCO1Q9BQS8 1478 aa2.19□□□□□ -2.06
BRCA1-204ENST00000412061 PLXNA2O75051 1894 aa2.19□□□□□ -2.06
BRCA1-204ENST00000412061 SIP14410 1827 aa2.18□□□□□ -2.06
BRCA1-204ENST00000412061 TRBV6-5A0A0K0K1A5 114 aa2.18□□□□□ -2.06
BRCA1-204ENST00000412061 M0R143 59 aa2.18□□□□□ -2.06
BRCA1-204ENST00000412061 IFNA17P01571 189 aa2.18□□□□□ -2.06
BRCA1-204ENST00000412061 IGKV4-1P06312 121 aa2.18□□□□□ -2.06
BRCA1-204ENST00000412061 NCMAPQ5T1S8 102 aa2.18□□□□□ -2.06
BRCA1-204ENST00000412061 SVBPQ8N300 66 aa2.18□□□□□ -2.06
BRCA1-204ENST00000412061 SPANXDQ9BXN6 97 aa2.18□□□□□ -2.06
BRCA1-204ENST00000412061 CDC42SE1Q9NRR8 79 aa2.18□□□□□ -2.06
BRCA1-204ENST00000412061 NDUFA12Q9UI09 145 aa2.18□□□□□ -2.06
BRCA1-204ENST00000412061 KLK9Q9UKQ9 250 aa2.18□□□□□ -2.06
BRCA1-204ENST00000412061 CTTNBP2Q8WZ74 1663 aa2.18□□□□□ -2.06
BRCA1-204ENST00000412061 PTPN23Q9H3S7 1636 aa2.18□□□□□ -2.06
BRCA1-204ENST00000412061 SAMD9Q5K651 1589 aa2.18□□□□□ -2.06
BRCA1-204ENST00000412061 TNRC6AQ8NDV7 1962 aaKnown RBP2.18□□□□□ -2.06
BRCA1-204ENST00000412061 CLASP1Q7Z460 1538 aa2.18□□□□□ -2.06
BRCA1-204ENST00000412061 CASKIN1Q8WXD9 1431 aa2.18□□□□□ -2.06
BRCA1-204ENST00000412061 AKAP12Q02952 1782 aa2.18□□□□□ -2.06
BRCA1-204ENST00000412061 MYOFQ9NZM1 2061 aa2.18□□□□□ -2.06
BRCA1-204ENST00000412061 TRAV2A0A0B4J234 112 aa2.17□□□□□ -2.06
BRCA1-204ENST00000412061 TRBV6-4A0A1B0GX49 114 aa2.17□□□□□ -2.06
BRCA1-204ENST00000412061 IGHV3-33P01772 117 aa2.17□□□□□ -2.06
BRCA1-204ENST00000412061 IGKCP01834 107 aa2.17□□□□□ -2.06
BRCA1-204ENST00000412061 S100A7L2Q5SY68 101 aa2.17□□□□□ -2.06
BRCA1-204ENST00000412061 UNQ5815/PRO19632Q6UWF5 114 aa2.17□□□□□ -2.06
BRCA1-204ENST00000412061 Q6ZRN7 208 aaPredicted RBP2.17□□□□□ -2.06
BRCA1-204ENST00000412061 C10orf105Q8TEF2 133 aa2.17□□□□□ -2.06
BRCA1-204ENST00000412061 ICE1Q9Y2F5 2266 aa2.17□□□□□ -2.06
BRCA1-204ENST00000412061 EPRSP07814 1512 aaKnown RBP2.17□□□□□ -2.06
BRCA1-204ENST00000412061 CUX1P39880 1505 aa2.17□□□□□ -2.06
BRCA1-204ENST00000412061 ALPK2Q86TB3 2170 aa2.17□□□□□ -2.06
BRCA1-204ENST00000412061 TEX14Q8IWB6 1497 aa2.17□□□□□ -2.06
BRCA1-204ENST00000412061 CHD3Q12873 2000 aaKnown RBP2.17□□□□□ -2.06
BRCA1-204ENST00000412061 UNC13CQ8NB66 2214 aa2.17□□□□□ -2.06
BRCA1-204ENST00000412061 TOP2BQ02880 1626 aa2.17□□□□□ -2.06
BRCA1-204ENST00000412061 THOC2Q8NI27 1593 aaKnown RBP2.17□□□□□ -2.06
BRCA1-204ENST00000412061 OOSP1A8MZH6 123 aa2.17□□□□□ -2.06
BRCA1-204ENST00000412061 SPINK8P0C7L1 97 aa2.17□□□□□ -2.06
BRCA1-204ENST00000412061 IFITM1P13164 125 aa2.17□□□□□ -2.06
BRCA1-204ENST00000412061 S100A10P60903 97 aa2.17□□□□□ -2.06
BRCA1-204ENST00000412061 NPC2P61916 151 aa2.17□□□□□ -2.06
BRCA1-204ENST00000412061 PKIAP61925 76 aa2.17□□□□□ -2.06
BRCA1-204ENST00000412061 RHOHQ15669 191 aa2.17□□□□□ -2.06
BRCA1-204ENST00000412061 IQCJQ1A5X6 159 aa2.17□□□□□ -2.06
BRCA1-204ENST00000412061 LINC00526Q96FQ7 95 aa2.17□□□□□ -2.06
BRCA1-204ENST00000412061 LIMD2Q9BT23 127 aa2.17□□□□□ -2.06
BRCA1-204ENST00000412061 CR1P17927 2039 aa2.16□□□□□ -2.06
BRCA1-204ENST00000412061 ANKRD50Q9ULJ7 1429 aa2.16□□□□□ -2.06
BRCA1-204ENST00000412061 PTPRDP23468 1912 aa2.16□□□□□ -2.06
BRCA1-204ENST00000412061 TMEM30CPA0ZSE6 113 aa2.16□□□□□ -2.06
BRCA1-204ENST00000412061 J3QRE1 110 aa2.16□□□□□ -2.06
BRCA1-204ENST00000412061 TFF1P04155 84 aa2.16□□□□□ -2.06
BRCA1-204ENST00000412061 SLC25A6P12236 298 aa2.16□□□□□ -2.06
BRCA1-204ENST00000412061 CSAG1Q6PB30 78 aa2.16□□□□□ -2.06
BRCA1-204ENST00000412061 PP632Q6XCG6 107 aa2.16□□□□□ -2.06
BRCA1-204ENST00000412061 PPDPFLQ8WWR9 84 aa2.16□□□□□ -2.06
BRCA1-204ENST00000412061 COL5A3P25940 1745 aaPredicted RBP2.16□□□□□ -2.06
BRCA1-204ENST00000412061 ABCC10Q5T3U5 1492 aa2.15□□□□□ -2.06
BRCA1-204ENST00000412061 RALGAPBQ86X10 1494 aa2.15□□□□□ -2.06
BRCA1-204ENST00000412061 GBF1Q92538 1859 aa2.15□□□□□ -2.06
BRCA1-204ENST00000412061 RBBP6Q7Z6E9 1792 aaKnown RBP2.15□□□□□ -2.07
BRCA1-204ENST00000412061 EFCAB5A4FU69 1503 aa2.15□□□□□ -2.07
BRCA1-204ENST00000412061 PPYP01298 95 aa2.15□□□□□ -2.07
BRCA1-204ENST00000412061 KRTAP10-1P60331 282 aa2.15□□□□□ -2.07
BRCA1-204ENST00000412061 LCE1CQ5T751 118 aa2.15□□□□□ -2.07
BRCA1-204ENST00000412061 LCE1BQ5T7P3 118 aa2.15□□□□□ -2.07
BRCA1-204ENST00000412061 C12orf73Q69YU5 71 aa2.15□□□□□ -2.07
BRCA1-204ENST00000412061 RPL7L1Q6DKI1 246 aaKnown RBP2.15□□□□□ -2.07
BRCA1-204ENST00000412061 SLC48A1Q6P1K1 146 aa2.15□□□□□ -2.07
BRCA1-204ENST00000412061 LYPD5Q6UWN5 251 aa2.15□□□□□ -2.07
BRCA1-204ENST00000412061 C15orf53Q8NAA6 179 aa2.15□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms