RNA–Protein interactions for RNA: ENST00000411767.6

PTPN13-202, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-202ENST00000411767 LINC00694P0DN24 101 aa3.56□□□□□ -1.84
PTPN13-202ENST00000411767 HMGA1P17096 107 aaKnown RBP3.56□□□□□ -1.84
PTPN13-202ENST00000411767 IGFBP6P24592 240 aaPredicted RBP3.56□□□□□ -1.84
PTPN13-202ENST00000411767 TNFRSF12AQ9NP84 129 aa3.56□□□□□ -1.84
PTPN13-202ENST00000411767 RP1P56715 2156 aa3.56□□□□□ -1.84
PTPN13-202ENST00000411767 C19orf84I3L1E1 186 aa3.56□□□□□ -1.84
PTPN13-202ENST00000411767 HHLA3Q9XRX5 114 aa3.56□□□□□ -1.84
PTPN13-202ENST00000411767 MYH13Q9UKX3 1938 aa3.56□□□□□ -1.84
PTPN13-202ENST00000411767 KMT2EQ8IZD2 1858 aa3.56□□□□□ -1.84
PTPN13-202ENST00000411767 KIAA0100Q14667 2235 aaKnown RBP3.56□□□□□ -1.84
PTPN13-202ENST00000411767 IGKV6D-21A0A0A0MT36 114 aa3.56□□□□□ -1.84
PTPN13-202ENST00000411767 IGKV2-24A0A0C4DH68 120 aa3.56□□□□□ -1.84
PTPN13-202ENST00000411767 ZGRF1Q86YA3 2104 aa3.56□□□□□ -1.84
PTPN13-202ENST00000411767 A0A0J9YXY3 114 aa3.56□□□□□ -1.84
PTPN13-202ENST00000411767 IGKV1-17P01599 117 aa3.56□□□□□ -1.84
PTPN13-202ENST00000411767 ZNF843Q8N446 348 aa3.56□□□□□ -1.84
PTPN13-202ENST00000411767 TP53AIP1Q9HCN2 124 aa3.56□□□□□ -1.84
PTPN13-202ENST00000411767 XAGE1AQ9HD64 81 aa3.56□□□□□ -1.84
PTPN13-202ENST00000411767 CCL26Q9Y258 94 aa3.56□□□□□ -1.84
PTPN13-202ENST00000411767 ICE1Q9Y2F5 2266 aa3.56□□□□□ -1.84
PTPN13-202ENST00000411767 C3orf84H3BNL1 204 aa3.55□□□□□ -1.84
PTPN13-202ENST00000411767 LHFPL6Q9Y693 200 aa3.55□□□□□ -1.84
PTPN13-202ENST00000411767 WNK3Q9BYP7 1800 aa3.55□□□□□ -1.84
PTPN13-202ENST00000411767 A0A096LNI7 61 aa3.55□□□□□ -1.84
PTPN13-202ENST00000411767 TGFBR3LH3BV60 316 aa3.55□□□□□ -1.84
PTPN13-202ENST00000411767 PRR25Q96S07 402 aa3.55□□□□□ -1.84
PTPN13-202ENST00000411767 PLCH1Q4KWH8 1693 aa3.55□□□□□ -1.84
PTPN13-202ENST00000411767 ITGB4P16144 1822 aa3.55□□□□□ -1.84
PTPN13-202ENST00000411767 TAF1P21675 1872 aa3.55□□□□□ -1.84
PTPN13-202ENST00000411767 SNRNP200O75643 2136 aaKnown RBP3.55□□□□□ -1.84
PTPN13-202ENST00000411767 DEFB103AP81534 67 aa3.55□□□□□ -1.84
PTPN13-202ENST00000411767 CHD3Q12873 2000 aaKnown RBP3.55□□□□□ -1.84
PTPN13-202ENST00000411767 C6orf99Q4VX62 202 aa3.55□□□□□ -1.84
PTPN13-202ENST00000411767 TJP1Q07157 1748 aa3.55□□□□□ -1.84
PTPN13-202ENST00000411767 GPHA2Q96T91 129 aa3.55□□□□□ -1.84
PTPN13-202ENST00000411767 CICQ96RK0 1608 aaPredicted RBP3.55□□□□□ -1.84
PTPN13-202ENST00000411767 OTOFQ9HC10 1997 aa3.55□□□□□ -1.84
PTPN13-202ENST00000411767 TRBV6-6A0A0A6YYG2 114 aa3.54□□□□□ -1.84
PTPN13-202ENST00000411767 TMEM89A2RUT3 159 aa3.54□□□□□ -1.84
PTPN13-202ENST00000411767 CD164Q04900 197 aa3.54□□□□□ -1.84
PTPN13-202ENST00000411767 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.54□□□□□ -1.84
PTPN13-202ENST00000411767 ANKRD36CQ5JPF3 1778 aa3.54□□□□□ -1.84
PTPN13-202ENST00000411767 LRP6O75581 1613 aa3.54□□□□□ -1.84
PTPN13-202ENST00000411767 E9PLN8 166 aa3.54□□□□□ -1.84
PTPN13-202ENST00000411767 H0YJW9 148 aa3.54□□□□□ -1.84
PTPN13-202ENST00000411767 M0R378 163 aa3.54□□□□□ -1.84
PTPN13-202ENST00000411767 Q8N6K4 173 aa3.54□□□□□ -1.84
PTPN13-202ENST00000411767 TOGARAM1Q9Y4F4 1720 aa3.54□□□□□ -1.84
PTPN13-202ENST00000411767 WFDC2Q14508 124 aa3.54□□□□□ -1.84
PTPN13-202ENST00000411767 C19orf48Q6RUI8 117 aa3.54□□□□□ -1.84
PTPN13-202ENST00000411767 IBA57-AS1B1ANH7 110 aa3.54□□□□□ -1.84
PTPN13-202ENST00000411767 C11orf53Q8IXP5 236 aa3.54□□□□□ -1.84
PTPN13-202ENST00000411767 A0A0G2JRQ6 117 aa3.54□□□□□ -1.84
PTPN13-202ENST00000411767 LY6LH3BQJ8 138 aa3.54□□□□□ -1.84
PTPN13-202ENST00000411767 RFPL3SP0C7P2 107 aa3.54□□□□□ -1.84
PTPN13-202ENST00000411767 TNRC6AQ8NDV7 1962 aaKnown RBP3.54□□□□□ -1.84
PTPN13-202ENST00000411767 DOCK6Q96HP0 2047 aa3.54□□□□□ -1.84
PTPN13-202ENST00000411767 CRIPAKQ8N1N5 446 aa3.54□□□□□ -1.84
PTPN13-202ENST00000411767 CT62P0C5K7 136 aa3.53□□□□□ -1.84
PTPN13-202ENST00000411767 FOXL2NBQ6ZUU3 175 aa3.53□□□□□ -1.84
PTPN13-202ENST00000411767 IGLV7-46A0A075B6I9 117 aa3.53□□□□□ -1.84
PTPN13-202ENST00000411767 H3BRN7 92 aa3.53□□□□□ -1.84
PTPN13-202ENST00000411767 FAM120AOSQ5T036 256 aa3.53□□□□□ -1.84
PTPN13-202ENST00000411767 Q6ZTC4 211 aa3.53□□□□□ -1.84
PTPN13-202ENST00000411767 VOPP1Q96AW1 172 aa3.53□□□□□ -1.84
PTPN13-202ENST00000411767 SCN4AP35499 1836 aa3.53□□□□□ -1.84
PTPN13-202ENST00000411767 GBF1Q92538 1859 aa3.53□□□□□ -1.84
PTPN13-202ENST00000411767 LINC00526Q96FQ7 95 aa3.53□□□□□ -1.84
PTPN13-202ENST00000411767 MYO9BQ13459 2157 aa3.53□□□□□ -1.84
PTPN13-202ENST00000411767 SCN3AQ9NY46 2000 aa3.53□□□□□ -1.84
PTPN13-202ENST00000411767 NUP205Q92621 2012 aa3.53□□□□□ -1.84
PTPN13-202ENST00000411767 IGLV9-49A0A0B4J1Y8 123 aa3.53□□□□□ -1.84
PTPN13-202ENST00000411767 TRBV10-1A0A0K0K1A3 114 aa3.53□□□□□ -1.84
PTPN13-202ENST00000411767 IGLV3-19P01714 112 aa3.53□□□□□ -1.84
PTPN13-202ENST00000411767 Q5BKY6 102 aa3.53□□□□□ -1.84
PTPN13-202ENST00000411767 ZNF747Q9BV97 191 aa3.53□□□□□ -1.84
PTPN13-202ENST00000411767 PLA2G2DQ9UNK4 145 aa3.53□□□□□ -1.84
PTPN13-202ENST00000411767 LAMA4Q16363 1823 aa3.53□□□□□ -1.84
PTPN13-202ENST00000411767 MYO7AQ13402 2215 aa3.53□□□□□ -1.84
PTPN13-202ENST00000411767 IGHV6-1A0A0B4J1U7 121 aa3.53□□□□□ -1.84
PTPN13-202ENST00000411767 H3BPC8 53 aa3.53□□□□□ -1.84
PTPN13-202ENST00000411767 TDRG1Q3Y452 100 aa3.53□□□□□ -1.84
PTPN13-202ENST00000411767 FAM19A5Q7Z5A7 132 aaPredicted RBP3.53□□□□□ -1.84
PTPN13-202ENST00000411767 IL25Q9H293 177 aa3.53□□□□□ -1.84
PTPN13-202ENST00000411767 MIA3Q5JRA6 1907 aa3.53□□□□□ -1.84
PTPN13-202ENST00000411767 SPAARA0A1B0GVQ0 90 aa3.53□□□□□ -1.84
PTPN13-202ENST00000411767 A8MZ25 164 aa3.53□□□□□ -1.84
PTPN13-202ENST00000411767 INSL3P51460 131 aa3.53□□□□□ -1.84
PTPN13-202ENST00000411767 CD300CQ08708 224 aa3.53□□□□□ -1.84
PTPN13-202ENST00000411767 COL9A3Q14050 684 aaPredicted RBP3.53□□□□□ -1.84
PTPN13-202ENST00000411767 COL14A1Q05707 1796 aaKnown RBP3.52□□□□□ -1.85
PTPN13-202ENST00000411767 C19orf71A6NCJ1 209 aa3.52□□□□□ -1.85
PTPN13-202ENST00000411767 DEFB132Q7Z7B7 95 aa3.52□□□□□ -1.85
PTPN13-202ENST00000411767 Q8N814 137 aa3.52□□□□□ -1.85
PTPN13-202ENST00000411767 ZNF831Q5JPB2 1677 aa3.52□□□□□ -1.85
PTPN13-202ENST00000411767 IGLV4-3A0A075B6K6 122 aa3.52□□□□□ -1.85
PTPN13-202ENST00000411767 IGLV2-23P01705 113 aa3.52□□□□□ -1.85
PTPN13-202ENST00000411767 DOCK7Q96N67 2140 aa3.52□□□□□ -1.85
PTPN13-202ENST00000411767 NUP98P52948 1817 aa3.52□□□□□ -1.85
PTPN13-202ENST00000411767 FANCMQ8IYD8 2048 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms