RNA–Protein interactions for RNA: ENST00000409455.5

LIMS2-205, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-205ENST00000409455 SUMO2P61956 95 aaKnown RBP11.8□□□□□ -0.52
LIMS2-205ENST00000409455 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.8□□□□□ -0.52
LIMS2-205ENST00000409455 H3BVH4 76 aa11.79□□□□□ -0.52
LIMS2-205ENST00000409455 BAALCQ8WXS3 180 aa11.79□□□□□ -0.52
LIMS2-205ENST00000409455 UTP20O75691 2785 aaKnown RBP11.79□□□□□ -0.52
LIMS2-205ENST00000409455 TRBV20-1A0A075B6N2 111 aa11.79□□□□□ -0.52
LIMS2-205ENST00000409455 BUB3O43684 328 aa11.79□□□□□ -0.52
LIMS2-205ENST00000409455 PLEKHB2Q96CS7 222 aa11.79□□□□□ -0.52
LIMS2-205ENST00000409455 A8MWV9 139 aa11.78□□□□□ -0.52
LIMS2-205ENST00000409455 C2orf66Q6UXQ4 117 aa11.78□□□□□ -0.52
LIMS2-205ENST00000409455 RNF183Q96D59 192 aa11.78□□□□□ -0.52
LIMS2-205ENST00000409455 CARD19Q96LW7 228 aa11.78□□□□□ -0.52
LIMS2-205ENST00000409455 SPG11Q96JI7 2443 aa11.77□□□□□ -0.52
LIMS2-205ENST00000409455 SVEP1Q4LDE5 3571 aa11.77□□□□□ -0.53
LIMS2-205ENST00000409455 PRSS29PA6NIE9 313 aa11.77□□□□□ -0.53
LIMS2-205ENST00000409455 CD7P09564 240 aa11.77□□□□□ -0.53
LIMS2-205ENST00000409455 COX6B1P14854 86 aa11.77□□□□□ -0.53
LIMS2-205ENST00000409455 ZFP36P26651 326 aaKnown RBP11.77□□□□□ -0.53
LIMS2-205ENST00000409455 CRYBG3Q68DQ2 2970 aa11.77□□□□□ -0.53
LIMS2-205ENST00000409455 ANAPC13Q9BS18 74 aa11.77□□□□□ -0.53
LIMS2-205ENST00000409455 BPESC1Q9GZL8 116 aa11.77□□□□□ -0.53
LIMS2-205ENST00000409455 IGHV3-66A0A0C4DH42 116 aa11.77□□□□□ -0.53
LIMS2-205ENST00000409455 ZNF688P0C7X2 276 aa11.77□□□□□ -0.53
LIMS2-205ENST00000409455 NDUFA11Q86Y39 141 aa11.77□□□□□ -0.53
LIMS2-205ENST00000409455 FAM208BQ5VWN6 2430 aa11.76□□□□□ -0.53
LIMS2-205ENST00000409455 TCL1BO95988 128 aa11.76□□□□□ -0.53
LIMS2-205ENST00000409455 IGHV4-39P01824 125 aa11.76□□□□□ -0.53
LIMS2-205ENST00000409455 RASL10AQ92737 203 aa11.76□□□□□ -0.53
LIMS2-205ENST00000409455 VPS13CQ709C8 3753 aa11.76□□□□□ -0.53
LIMS2-205ENST00000409455 HIF1ANQ9NWT6 349 aa11.76□□□□□ -0.53
LIMS2-205ENST00000409455 TMEM262E9PQX1 116 aa11.75□□□□□ -0.53
LIMS2-205ENST00000409455 HERVK_113P61574 105 aa11.75□□□□□ -0.53
LIMS2-205ENST00000409455 MRPL53Q96EL3 112 aaKnown RBP11.75□□□□□ -0.53
LIMS2-205ENST00000409455 ZFAND3Q9H8U3 227 aa11.75□□□□□ -0.53
LIMS2-205ENST00000409455 C15orf32Q32M92 178 aa11.75□□□□□ -0.53
LIMS2-205ENST00000409455 ZFAND6Q6FIF0 208 aa11.75□□□□□ -0.53
LIMS2-205ENST00000409455 C9orf47Q6ZRZ4 202 aa11.75□□□□□ -0.53
LIMS2-205ENST00000409455 KLHL30-AS1Q8NEE0 82 aa11.75□□□□□ -0.53
LIMS2-205ENST00000409455 CCL19Q99731 98 aa11.75□□□□□ -0.53
LIMS2-205ENST00000409455 LRRK2Q5S007 2527 aa11.74□□□□□ -0.53
LIMS2-205ENST00000409455 WNK2Q9Y3S1 2297 aa11.74□□□□□ -0.53
LIMS2-205ENST00000409455 M0R381 172 aa11.74□□□□□ -0.53
LIMS2-205ENST00000409455 Q6ZQT7 251 aa11.74□□□□□ -0.53
LIMS2-205ENST00000409455 DPH3P1Q9H4G8 78 aa11.74□□□□□ -0.53
LIMS2-205ENST00000409455 SBSPONQ8IVN8 264 aa11.74□□□□□ -0.53
LIMS2-205ENST00000409455 ANKRD29Q8N6D5 301 aa11.74□□□□□ -0.53
LIMS2-205ENST00000409455 TEX29Q8N6K0 151 aa11.74□□□□□ -0.53
LIMS2-205ENST00000409455 RPL39LQ96EH5 51 aaKnown RBP11.74□□□□□ -0.53
LIMS2-205ENST00000409455 UBR5O95071 2799 aaPredicted RBP11.73□□□□□ -0.53
LIMS2-205ENST00000409455 IGHV3OR16-13A0A075B7E8 117 aa11.73□□□□□ -0.53
LIMS2-205ENST00000409455 IGHV3-74A0A0B4J1X5 117 aa11.73□□□□□ -0.53
LIMS2-205ENST00000409455 TRAV8-2A0A0B4J237 113 aa11.73□□□□□ -0.53
LIMS2-205ENST00000409455 LINC01548A6NM66 108 aa11.73□□□□□ -0.53
LIMS2-205ENST00000409455 M0R1W7 72 aa11.73□□□□□ -0.53
LIMS2-205ENST00000409455 CLEC3BP05452 202 aa11.73□□□□□ -0.53
LIMS2-205ENST00000409455 SCGB1C2P0DMR2 95 aa11.73□□□□□ -0.53
LIMS2-205ENST00000409455 CSMD1Q96PZ7 3565 aa11.73□□□□□ -0.53
LIMS2-205ENST00000409455 A0A0J9YY99 117 aa11.73□□□□□ -0.53
LIMS2-205ENST00000409455 PRTN3P24158 256 aa11.73□□□□□ -0.53
LIMS2-205ENST00000409455 LMO4P61968 165 aa11.73□□□□□ -0.53
LIMS2-205ENST00000409455 PAPPA-AS1Q5QFB9 102 aa11.73□□□□□ -0.53
LIMS2-205ENST00000409455 ODF3BA8MYP8 253 aa11.72□□□□□ -0.53
LIMS2-205ENST00000409455 C10orf126Q8N4M7 172 aa11.72□□□□□ -0.53
LIMS2-205ENST00000409455 TGFAP01135 160 aa11.71□□□□□ -0.53
LIMS2-205ENST00000409455 MGPP08493 103 aa11.71□□□□□ -0.53
LIMS2-205ENST00000409455 GATA3P23771 443 aa11.71□□□□□ -0.53
LIMS2-205ENST00000409455 S100A4P26447 101 aaKnown RBP11.71□□□□□ -0.53
LIMS2-205ENST00000409455 KIR2DL4Q99706 377 aa11.71□□□□□ -0.53
LIMS2-205ENST00000409455 C14orf178Q8N769 122 aaPredicted RBP11.71□□□□□ -0.53
LIMS2-205ENST00000409455 NRGNQ92686 78 aa11.71□□□□□ -0.53
LIMS2-205ENST00000409455 METTL26Q96S19 204 aa11.71□□□□□ -0.53
LIMS2-205ENST00000409455 IGHV7-81A0A0B4J1V7 117 aa11.7□□□□□ -0.54
LIMS2-205ENST00000409455 CENPVL3A0A0U1RRI6 287 aa11.7□□□□□ -0.54
LIMS2-205ENST00000409455 CLPSL1A2RUU4 121 aa11.7□□□□□ -0.54
LIMS2-205ENST00000409455 PPP1R17O96001 155 aa11.7□□□□□ -0.54
LIMS2-205ENST00000409455 CFC1BP0CG36 223 aa11.7□□□□□ -0.54
LIMS2-205ENST00000409455 CFC1P0CG37 223 aa11.7□□□□□ -0.54
LIMS2-205ENST00000409455 GAGE5Q13069 117 aa11.7□□□□□ -0.54
LIMS2-205ENST00000409455 GAGE6Q13070 117 aa11.7□□□□□ -0.54
LIMS2-205ENST00000409455 VMO1Q7Z5L0 202 aa11.7□□□□□ -0.54
LIMS2-205ENST00000409455 PHLDA3Q9Y5J5 127 aa11.7□□□□□ -0.54
LIMS2-205ENST00000409455 C11orf86A6NJI1 115 aa11.7□□□□□ -0.54
LIMS2-205ENST00000409455 C1orf122Q6ZSJ8 110 aa11.7□□□□□ -0.54
LIMS2-205ENST00000409455 SS18L2Q9UHA2 77 aa11.7□□□□□ -0.54
LIMS2-205ENST00000409455 IGHV3-49A0A0A0MS15 119 aa11.69□□□□□ -0.54
LIMS2-205ENST00000409455 IGHV3-30P01768 117 aa11.69□□□□□ -0.54
LIMS2-205ENST00000409455 IGHV3-30-5P0DP03 117 aa11.69□□□□□ -0.54
LIMS2-205ENST00000409455 PRR9Q5T870 116 aa11.69□□□□□ -0.54
LIMS2-205ENST00000409455 Q8N6K4 173 aa11.69□□□□□ -0.54
LIMS2-205ENST00000409455 PRO1854Q9UHT4 67 aa11.69□□□□□ -0.54
LIMS2-205ENST00000409455 CSMD2Q7Z408 3487 aa11.69□□□□□ -0.54
LIMS2-205ENST00000409455 J3KRW8 73 aa11.69□□□□□ -0.54
LIMS2-205ENST00000409455 DUSP14O95147 198 aaKnown RBP11.69□□□□□ -0.54
LIMS2-205ENST00000409455 ATP5J2P56134 94 aa11.69□□□□□ -0.54
LIMS2-205ENST00000409455 ECSCRQ19T08 205 aa11.69□□□□□ -0.54
LIMS2-205ENST00000409455 FAM110DQ8TAY7 271 aaPredicted RBP11.69□□□□□ -0.54
LIMS2-205ENST00000409455 IGLV4-69A0A075B6H9 119 aa11.68□□□□□ -0.54
LIMS2-205ENST00000409455 CRYGDP07320 174 aa11.68□□□□□ -0.54
LIMS2-205ENST00000409455 ASIPP42127 132 aa11.68□□□□□ -0.54
LIMS2-205ENST00000409455 C16orf92Q96LL3 132 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 91.5 ms