RNA–Protein interactions for RNA: ENST00000409219.5

CHRNA1-203, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-203ENST00000409219 TRGV2A0A075B6R0 118 aa8.63□□□□□ -1.03
CHRNA1-203ENST00000409219 A0A1W2PRE2 83 aa8.63□□□□□ -1.03
CHRNA1-203ENST00000409219 NDUFB4O95168 129 aa8.63□□□□□ -1.03
CHRNA1-203ENST00000409219 OXTP01178 125 aa8.63□□□□□ -1.03
CHRNA1-203ENST00000409219 ADIRFQ15847 76 aa8.63□□□□□ -1.03
CHRNA1-203ENST00000409219 LYPD5Q6UWN5 251 aa8.63□□□□□ -1.03
CHRNA1-203ENST00000409219 COX7A2P2O60397 106 aa8.62□□□□□ -1.03
CHRNA1-203ENST00000409219 ZNF324O75467 553 aaPredicted RBP8.62□□□□□ -1.03
CHRNA1-203ENST00000409219 KRTAP10-4P60372 401 aaPredicted RBP8.62□□□□□ -1.03
CHRNA1-203ENST00000409219 C10orf113Q5VZT2 155 aa8.62□□□□□ -1.03
CHRNA1-203ENST00000409219 PATE2Q6UY27 113 aa8.62□□□□□ -1.03
CHRNA1-203ENST00000409219 Q6ZSA8 131 aa8.62□□□□□ -1.03
CHRNA1-203ENST00000409219 LINC01551Q86U37 167 aa8.62□□□□□ -1.03
CHRNA1-203ENST00000409219 PYGO2Q9BRQ0 406 aa8.62□□□□□ -1.03
CHRNA1-203ENST00000409219 A0A087X0K7 114 aa8.61□□□□□ -1.03
CHRNA1-203ENST00000409219 C9JCJ5 164 aa8.61□□□□□ -1.03
CHRNA1-203ENST00000409219 K7EP13 123 aa8.61□□□□□ -1.03
CHRNA1-203ENST00000409219 PAX4O43316 350 aa8.61□□□□□ -1.03
CHRNA1-203ENST00000409219 PFN1P07737 140 aaKnown RBP8.61□□□□□ -1.03
CHRNA1-203ENST00000409219 CXCL1P09341 107 aa8.61□□□□□ -1.03
CHRNA1-203ENST00000409219 Q8N814 137 aa8.61□□□□□ -1.03
CHRNA1-203ENST00000409219 SHANK2-AS3Q9BTD1 123 aa8.61□□□□□ -1.03
CHRNA1-203ENST00000409219 SLC25A2Q9BXI2 301 aa8.61□□□□□ -1.03
CHRNA1-203ENST00000409219 LRP2P98164 4655 aa8.6□□□□□ -1.03
CHRNA1-203ENST00000409219 TRBV20OR9-2A0A075B6H5 130 aa8.6□□□□□ -1.03
CHRNA1-203ENST00000409219 SCO2A0A1W2PP80 73 aa8.6□□□□□ -1.03
CHRNA1-203ENST00000409219 J3KRW8 73 aa8.6□□□□□ -1.03
CHRNA1-203ENST00000409219 PPP1R2P9O14990 202 aa8.6□□□□□ -1.03
CHRNA1-203ENST00000409219 OR7C2O60412 319 aa8.6□□□□□ -1.03
CHRNA1-203ENST00000409219 RPL7P18124 248 aaKnown RBP8.6□□□□□ -1.03
CHRNA1-203ENST00000409219 EVI2AP22794 236 aa8.6□□□□□ -1.03
CHRNA1-203ENST00000409219 DERL1Q9BUN8 251 aa8.6□□□□□ -1.03
CHRNA1-203ENST00000409219 GSN-AS1Q9NRJ2 163 aa8.6□□□□□ -1.03
CHRNA1-203ENST00000409219 TRGV1A0A0A0MS02 117 aa8.59□□□□□ -1.03
CHRNA1-203ENST00000409219 TGIF2-C20orf24A0A0A6YYL0 155 aa8.59□□□□□ -1.03
CHRNA1-203ENST00000409219 PSCAO43653 123 aa8.59□□□□□ -1.03
CHRNA1-203ENST00000409219 SMUG1Q53HV7 270 aa8.59□□□□□ -1.03
CHRNA1-203ENST00000409219 MORN5Q5VZ52 161 aa8.59□□□□□ -1.03
CHRNA1-203ENST00000409219 NEGR1Q7Z3B1 354 aa8.59□□□□□ -1.03
CHRNA1-203ENST00000409219 C11orf72Q8NBR9 251 aa8.59□□□□□ -1.03
CHRNA1-203ENST00000409219 IMMP2LQ96T52 175 aa8.59□□□□□ -1.03
CHRNA1-203ENST00000409219 TCEAL7Q9BRU2 100 aa8.59□□□□□ -1.03
CHRNA1-203ENST00000409219 URGCP-MRPS24S4R325 110 aa8.59□□□□□ -1.03
CHRNA1-203ENST00000409219 RNF213Q63HN8 5207 aa8.59□□□□□ -1.03
CHRNA1-203ENST00000409219 TRAV12-3A0A0B4J271 114 aa8.58□□□□□ -1.04
CHRNA1-203ENST00000409219 C5orf52A6NGY3 159 aa8.58□□□□□ -1.04
CHRNA1-203ENST00000409219 GGTLC3B5MD39 225 aa8.58□□□□□ -1.04
CHRNA1-203ENST00000409219 HYPMO75409 117 aa8.58□□□□□ -1.04
CHRNA1-203ENST00000409219 CRYGDP07320 174 aa8.58□□□□□ -1.04
CHRNA1-203ENST00000409219 S100A7P31151 101 aa8.58□□□□□ -1.04
CHRNA1-203ENST00000409219 RPS10P46783 165 aaKnown RBP8.58□□□□□ -1.04
CHRNA1-203ENST00000409219 UBE2L3P68036 154 aaKnown RBP8.58□□□□□ -1.04
CHRNA1-203ENST00000409219 MRPL23Q16540 153 aaKnown RBP8.58□□□□□ -1.04
CHRNA1-203ENST00000409219 ZFP82Q8N141 532 aa8.58□□□□□ -1.04
CHRNA1-203ENST00000409219 PAXXQ9BUH6 204 aa8.58□□□□□ -1.04
CHRNA1-203ENST00000409219 OR51M1Q9H341 326 aa8.58□□□□□ -1.04
CHRNA1-203ENST00000409219 PRO0255Q9UI72 69 aa8.58□□□□□ -1.04
CHRNA1-203ENST00000409219 TRAV5A0A0B4J249 113 aa8.57□□□□□ -1.04
CHRNA1-203ENST00000409219 PRAC2D3DTV9 90 aa8.57□□□□□ -1.04
CHRNA1-203ENST00000409219 IGHV3-53P01767 116 aa8.57□□□□□ -1.04
CHRNA1-203ENST00000409219 OR10J4P0C629 311 aa8.57□□□□□ -1.04
CHRNA1-203ENST00000409219 S100PP25815 95 aa8.57□□□□□ -1.04
CHRNA1-203ENST00000409219 RPL35P42766 123 aaKnown RBP8.57□□□□□ -1.04
CHRNA1-203ENST00000409219 CRYBA4P53673 196 aa8.57□□□□□ -1.04
CHRNA1-203ENST00000409219 LINC00305Q7Z4B0 112 aa8.57□□□□□ -1.04
CHRNA1-203ENST00000409219 FXYD5Q96DB9 178 aa8.57□□□□□ -1.04
CHRNA1-203ENST00000409219 BTF3L4Q96K17 158 aa8.57□□□□□ -1.04
CHRNA1-203ENST00000409219 HIGD1AQ9Y241 93 aa8.57□□□□□ -1.04
CHRNA1-203ENST00000409219 MRPS12O15235 138 aaKnown RBP8.57□□□□□ -1.04
CHRNA1-203ENST00000409219 C10orf126Q8N4M7 172 aa8.57□□□□□ -1.04
CHRNA1-203ENST00000409219 OCC1Q8TAD7 63 aa8.57□□□□□ -1.04
CHRNA1-203ENST00000409219 SFRP2Q96HF1 295 aa8.57□□□□□ -1.04
CHRNA1-203ENST00000409219 ZNF331Q9NQX6 463 aaPredicted RBP8.57□□□□□ -1.04
CHRNA1-203ENST00000409219 SPINK4O60575 86 aa8.56□□□□□ -1.04
CHRNA1-203ENST00000409219 TYMSP04818 313 aa8.56□□□□□ -1.04
CHRNA1-203ENST00000409219 S100A6P06703 90 aa8.56□□□□□ -1.04
CHRNA1-203ENST00000409219 PYYP10082 97 aa8.56□□□□□ -1.04
CHRNA1-203ENST00000409219 SUMO1P63165 101 aaKnown RBP8.56□□□□□ -1.04
CHRNA1-203ENST00000409219 KCNIP4Q6PIL6 250 aa8.56□□□□□ -1.04
CHRNA1-203ENST00000409219 SCXQ7RTU7 201 aa8.56□□□□□ -1.04
CHRNA1-203ENST00000409219 C8orf49Q96NF6 230 aa8.56□□□□□ -1.04
CHRNA1-203ENST00000409219 TMEM14CQ9P0S9 112 aa8.56□□□□□ -1.04
CHRNA1-203ENST00000409219 KLF12Q9Y4X4 402 aa8.56□□□□□ -1.04
CHRNA1-203ENST00000409219 K7EQD1 137 aa8.55□□□□□ -1.04
CHRNA1-203ENST00000409219 PHOX2AO14813 284 aa8.55□□□□□ -1.04
CHRNA1-203ENST00000409219 SNRPCP09234 159 aaKnown RBP8.55□□□□□ -1.04
CHRNA1-203ENST00000409219 CT45A10P0DMU9 189 aa8.55□□□□□ -1.04
CHRNA1-203ENST00000409219 SNRPEP62304 92 aaKnown RBP8.55□□□□□ -1.04
CHRNA1-203ENST00000409219 FHL2Q14192 279 aa8.55□□□□□ -1.04
CHRNA1-203ENST00000409219 VGLL1Q99990 258 aa8.55□□□□□ -1.04
CHRNA1-203ENST00000409219 HHLA3Q9XRX5 114 aa8.55□□□□□ -1.04
CHRNA1-203ENST00000409219 TNXBP22105 4242 aa8.55□□□□□ -1.04
CHRNA1-203ENST00000409219 TRAV9-1A0A075B6T8 112 aa8.54□□□□□ -1.04
CHRNA1-203ENST00000409219 PGPEP1LA6NFU8 196 aa8.54□□□□□ -1.04
CHRNA1-203ENST00000409219 K7EN84 100 aa8.54□□□□□ -1.04
CHRNA1-203ENST00000409219 SLC17A3O00476 420 aa8.54□□□□□ -1.04
CHRNA1-203ENST00000409219 TRGC2P03986 189 aa8.54□□□□□ -1.04
CHRNA1-203ENST00000409219 SRIP30626 198 aa8.54□□□□□ -1.04
CHRNA1-203ENST00000409219 GNG4P50150 75 aa8.54□□□□□ -1.04
CHRNA1-203ENST00000409219 TCL1AP56279 114 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms