RNA–Protein interactions for RNA: ENST00000409076.6

SNX13-201, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,818 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-201ENST00000409076 IGHV3-38A0A0C4DH36 116 aa6.4□□□□□ -1.39
SNX13-201ENST00000409076 ASIPP42127 132 aa6.4□□□□□ -1.39
SNX13-201ENST00000409076 SPINK13Q1W4C9 94 aa6.4□□□□□ -1.39
SNX13-201ENST00000409076 Q6AWC8 147 aa6.4□□□□□ -1.39
SNX13-201ENST00000409076 IGFL3Q6UXB1 125 aa6.4□□□□□ -1.39
SNX13-201ENST00000409076 C2orf66Q6UXQ4 117 aa6.4□□□□□ -1.39
SNX13-201ENST00000409076 PLEKHB2Q96CS7 222 aa6.4□□□□□ -1.39
SNX13-201ENST00000409076 PRADC1Q9BSG0 188 aa6.4□□□□□ -1.39
SNX13-201ENST00000409076 BSNQ9UPA5 3926 aa6.39□□□□□ -1.39
SNX13-201ENST00000409076 NF1P21359 2839 aa6.39□□□□□ -1.39
SNX13-201ENST00000409076 CEACAM4O75871 244 aa6.39□□□□□ -1.39
SNX13-201ENST00000409076 FAM159AQ6UWV7 190 aa6.39□□□□□ -1.39
SNX13-201ENST00000409076 BOD1L2Q8IYS8 172 aa6.39□□□□□ -1.39
SNX13-201ENST00000409076 Q8N9W7 124 aa6.39□□□□□ -1.39
SNX13-201ENST00000409076 PHLDA1Q8WV24 401 aaPredicted RBP6.39□□□□□ -1.39
SNX13-201ENST00000409076 RNF185Q96GF1 192 aa6.39□□□□□ -1.39
SNX13-201ENST00000409076 C20orf173Q96LM9 149 aa6.39□□□□□ -1.39
SNX13-201ENST00000409076 NPFFR1Q9GZQ6 430 aa6.39□□□□□ -1.39
SNX13-201ENST00000409076 NCOR1P1Q9H4R4 102 aa6.39□□□□□ -1.39
SNX13-201ENST00000409076 NXT2Q9NPJ8 142 aaKnown RBP6.39□□□□□ -1.39
SNX13-201ENST00000409076 TP53TG1Q9Y2A0 90 aa6.39□□□□□ -1.39
SNX13-201ENST00000409076 A0A1W2PRX2 142 aa6.39□□□□□ -1.39
SNX13-201ENST00000409076 DPF1Q92782 380 aa6.39□□□□□ -1.39
SNX13-201ENST00000409076 CLUHP3Q96NS8 147 aa6.39□□□□□ -1.39
SNX13-201ENST00000409076 KAAG1Q9UBP8 84 aa6.39□□□□□ -1.39
SNX13-201ENST00000409076 NBEAL2Q6ZNJ1 2754 aa6.39□□□□□ -1.39
SNX13-201ENST00000409076 TRAV41A0A0B4J266 112 aa6.39□□□□□ -1.39
SNX13-201ENST00000409076 F8W735 103 aaPredicted RBP6.39□□□□□ -1.39
SNX13-201ENST00000409076 IGHV4-38-2P0DP08 117 aa6.39□□□□□ -1.39
SNX13-201ENST00000409076 RPS20P60866 119 aaKnown RBP6.39□□□□□ -1.39
SNX13-201ENST00000409076 DEFB136Q30KP8 78 aa6.39□□□□□ -1.39
SNX13-201ENST00000409076 GAGE13Q4V321 117 aa6.39□□□□□ -1.39
SNX13-201ENST00000409076 CEMP1Q6PRD7 247 aaPredicted RBP6.39□□□□□ -1.39
SNX13-201ENST00000409076 BUB3O43684 328 aa6.38□□□□□ -1.39
SNX13-201ENST00000409076 ATP5J2P56134 94 aa6.38□□□□□ -1.39
SNX13-201ENST00000409076 SRSF1Q07955 248 aaKnown RBP eCLIP6.38□□□□□ -1.39
SNX13-201ENST00000409076 ZFP2Q6ZN57 461 aa6.38□□□□□ -1.39
SNX13-201ENST00000409076 OR9G4Q8NGQ1 327 aa6.38□□□□□ -1.39
SNX13-201ENST00000409076 CCDC140Q96MF4 163 aa6.38□□□□□ -1.39
SNX13-201ENST00000409076 LINC00574Q9H8X3 128 aa6.38□□□□□ -1.39
SNX13-201ENST00000409076 WI2-2373I1.2A0A1W2PRP0 233 aa6.38□□□□□ -1.39
SNX13-201ENST00000409076 C12orf74Q32Q52 190 aa6.38□□□□□ -1.39
SNX13-201ENST00000409076 C20orf78Q9BR46 151 aa6.38□□□□□ -1.39
SNX13-201ENST00000409076 GNLYP22749 145 aa6.38□□□□□ -1.39
SNX13-201ENST00000409076 ADORA2A-AS1P86434 159 aa6.38□□□□□ -1.39
SNX13-201ENST00000409076 CEND1Q8N111 149 aa6.38□□□□□ -1.39
SNX13-201ENST00000409076 C3orf56Q8N813 242 aa6.38□□□□□ -1.39
SNX13-201ENST00000409076 TNFRSF14Q92956 283 aa6.38□□□□□ -1.39
SNX13-201ENST00000409076 RHPN1-AS1Q9BWJ2 59 aa6.38□□□□□ -1.39
SNX13-201ENST00000409076 MSRB2Q9Y3D2 182 aa6.38□□□□□ -1.39
SNX13-201ENST00000409076 HOXA3O43365 443 aaPredicted RBP6.37□□□□□ -1.39
SNX13-201ENST00000409076 ATP5LO75964 103 aa6.37□□□□□ -1.39
SNX13-201ENST00000409076 H7C1H1 209 aa6.37□□□□□ -1.39
SNX13-201ENST00000409076 NPFFO15130 113 aa6.37□□□□□ -1.39
SNX13-201ENST00000409076 IGHV3-53P01767 116 aa6.37□□□□□ -1.39
SNX13-201ENST00000409076 P0DMU3 169 aa6.37□□□□□ -1.39
SNX13-201ENST00000409076 FAM231AP0DMU4 169 aa6.37□□□□□ -1.39
SNX13-201ENST00000409076 FAM231CP0DMU5 169 aa6.37□□□□□ -1.39
SNX13-201ENST00000409076 DAND5Q8N907 189 aa6.37□□□□□ -1.39
SNX13-201ENST00000409076 SPXQ9BT56 116 aa6.37□□□□□ -1.39
SNX13-201ENST00000409076 J3QR89 54 aa6.37□□□□□ -1.39
SNX13-201ENST00000409076 CRXO43186 299 aaPredicted RBP6.37□□□□□ -1.39
SNX13-201ENST00000409076 SUMO2P61956 95 aaKnown RBP6.37□□□□□ -1.39
SNX13-201ENST00000409076 IGLL5B9A064 214 aa6.36□□□□□ -1.39
SNX13-201ENST00000409076 C19orf84I3L1E1 186 aa6.36□□□□□ -1.39
SNX13-201ENST00000409076 SYT8Q8NBV8 401 aa6.36□□□□□ -1.39
SNX13-201ENST00000409076 A0A1B0GW15 77 aa6.36□□□□□ -1.39
SNX13-201ENST00000409076 IGHG4P01861 327 aa6.36□□□□□ -1.39
SNX13-201ENST00000409076 Q8N8P6 123 aa6.36□□□□□ -1.39
SNX13-201ENST00000409076 A8MZ25 164 aa6.36□□□□□ -1.39
SNX13-201ENST00000409076 MRPS12O15235 138 aaKnown RBP6.36□□□□□ -1.39
SNX13-201ENST00000409076 LGALS3P17931 250 aaKnown RBP6.36□□□□□ -1.39
SNX13-201ENST00000409076 LYPD1Q8N2G4 141 aa6.36□□□□□ -1.39
SNX13-201ENST00000409076 SIGMAR1Q99720 223 aa6.36□□□□□ -1.39
SNX13-201ENST00000409076 SMIM2Q9BVW6 85 aa6.36□□□□□ -1.39
SNX13-201ENST00000409076 G3V4G9 280 aa6.35□□□□□ -1.39
SNX13-201ENST00000409076 SYNJ2BPP57105 145 aa6.35□□□□□ -1.39
SNX13-201ENST00000409076 KIR2DL4Q99706 377 aa6.35□□□□□ -1.39
SNX13-201ENST00000409076 ZNF580Q9UK33 172 aa6.35□□□□□ -1.39
SNX13-201ENST00000409076 PDE6HQ13956 83 aa6.35□□□□□ -1.39
SNX13-201ENST00000409076 TEX15Q9BXT5 2789 aa6.35□□□□□ -1.39
SNX13-201ENST00000409076 ZNF876PQ49A33 203 aa6.35□□□□□ -1.39
SNX13-201ENST00000409076 MUC4Q99102 2169 aa6.34□□□□□ -1.39
SNX13-201ENST00000409076 TNFRSF13BO14836 293 aaPredicted RBP6.34□□□□□ -1.39
SNX13-201ENST00000409076 IGLC6P0CF74 106 aa6.34□□□□□ -1.39
SNX13-201ENST00000409076 TRAV8-2A0A0B4J237 113 aa6.34□□□□□ -1.39
SNX13-201ENST00000409076 GAGE12HA6NDE8 117 aa6.34□□□□□ -1.39
SNX13-201ENST00000409076 PROK1P58294 105 aa6.34□□□□□ -1.39
SNX13-201ENST00000409076 GATD1Q8NB37 220 aa6.34□□□□□ -1.39
SNX13-201ENST00000409076 SPAG8Q99932 426 aaPredicted RBP6.34□□□□□ -1.39
SNX13-201ENST00000409076 SLC50A1Q9BRV3 221 aa6.34□□□□□ -1.39
SNX13-201ENST00000409076 COL27A1Q8IZC6 1860 aaPredicted RBP6.34□□□□□ -1.39
SNX13-201ENST00000409076 TRAV21A0A0B4J279 112 aa6.34□□□□□ -1.4
SNX13-201ENST00000409076 IGHV4-61A0A0C4DH41 118 aa6.34□□□□□ -1.4
SNX13-201ENST00000409076 LY6LH3BQJ8 138 aa6.34□□□□□ -1.4
SNX13-201ENST00000409076 RS1O15537 224 aa6.34□□□□□ -1.4
SNX13-201ENST00000409076 MDFICQ9P1T7 246 aa6.34□□□□□ -1.4
SNX13-201ENST00000409076 CENPVL3A0A0U1RRI6 287 aa6.33□□□□□ -1.4
SNX13-201ENST00000409076 SDHAF1A6NFY7 115 aa6.33□□□□□ -1.4
SNX13-201ENST00000409076 C11orf86A6NJI1 115 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms