RNA–Protein interactions for RNA: ENST00000409025.5

USP39-202, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5 BASIC

Gene USP39, Length 1,946 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-202ENST00000409025 H3BMM0 161 aa14.05□□□□□ -0.16
USP39-202ENST00000409025 LEPROTL1O95214 131 aa14.04□□□□□ -0.16
USP39-202ENST00000409025 MAP1LC3AQ9H492 121 aa14.04□□□□□ -0.16
USP39-202ENST00000409025 ZNF256Q9Y2P7 627 aaPredicted RBP14.04□□□□□ -0.16
USP39-202ENST00000409025 AGRNO00468 2067 aa14.04□□□□□ -0.16
USP39-202ENST00000409025 FLNBO75369 2602 aaKnown RBP14.04□□□□□ -0.16
USP39-202ENST00000409025 SPRY2O43597 315 aa14.03□□□□□ -0.16
USP39-202ENST00000409025 BTF3P20290 206 aaKnown RBP14.03□□□□□ -0.16
USP39-202ENST00000409025 NSUN5P1Q3KNT7 163 aa14.03□□□□□ -0.16
USP39-202ENST00000409025 ZNF664Q8N3J9 261 aa14.03□□□□□ -0.16
USP39-202ENST00000409025 Q8N976 141 aa14.03□□□□□ -0.16
USP39-202ENST00000409025 PRO1933Q9H354 126 aa14.03□□□□□ -0.16
USP39-202ENST00000409025 CUBNO60494 3623 aa14.03□□□□□ -0.16
USP39-202ENST00000409025 IGHV1OR15-1A0A075B7D0 117 aa14.03□□□□□ -0.16
USP39-202ENST00000409025 ADARB2-AS1A8MUL3 147 aa14.03□□□□□ -0.16
USP39-202ENST00000409025 TNFRSF6BO95407 300 aa14.03□□□□□ -0.16
USP39-202ENST00000409025 TEX43Q6ZNM6 134 aa14.03□□□□□ -0.16
USP39-202ENST00000409025 GAS8-AS1O95177 125 aa14.02□□□□□ -0.16
USP39-202ENST00000409025 ZNF124Q15973 351 aa14.02□□□□□ -0.16
USP39-202ENST00000409025 DPH3P1Q9H4G8 78 aa14.02□□□□□ -0.16
USP39-202ENST00000409025 NOTCH2Q04721 2471 aa14.02□□□□□ -0.17
USP39-202ENST00000409025 NXPH4O95158 308 aa14.02□□□□□ -0.17
USP39-202ENST00000409025 FXYD7P58549 80 aa14.02□□□□□ -0.17
USP39-202ENST00000409025 MRAP2Q96G30 205 aa14.02□□□□□ -0.17
USP39-202ENST00000409025 OR2K2Q8NGT1 345 aa14.01□□□□□ -0.17
USP39-202ENST00000409025 AP1S3Q96PC3 154 aa14.01□□□□□ -0.17
USP39-202ENST00000409025 HSPB8Q9UJY1 196 aa14.01□□□□□ -0.17
USP39-202ENST00000409025 SORL1Q92673 2214 aa14.01□□□□□ -0.17
USP39-202ENST00000409025 IGHV3-16A0A0C4DH30 117 aa14□□□□□ -0.17
USP39-202ENST00000409025 LINC00587B1AMM8 73 aa14□□□□□ -0.17
USP39-202ENST00000409025 GATA1P15976 413 aaPredicted RBP14□□□□□ -0.17
USP39-202ENST00000409025 C14orf178Q8N769 122 aaPredicted RBP14□□□□□ -0.17
USP39-202ENST00000409025 TMEM70Q9BUB7 260 aa14□□□□□ -0.17
USP39-202ENST00000409025 SAP30O75446 220 aa14□□□□□ -0.17
USP39-202ENST00000409025 NDUFA11Q86Y39 141 aa14□□□□□ -0.17
USP39-202ENST00000409025 Q8N1Y9 231 aa14□□□□□ -0.17
USP39-202ENST00000409025 NXT2Q9NPJ8 142 aaKnown RBP14□□□□□ -0.17
USP39-202ENST00000409025 TRAV26-2A0A0B4J265 109 aa13.99□□□□□ -0.17
USP39-202ENST00000409025 RBMY1BA6NDE4 496 aaKnown RBP13.99□□□□□ -0.17
USP39-202ENST00000409025 RBMY1EA6NEQ0 496 aaKnown RBP13.99□□□□□ -0.17
USP39-202ENST00000409025 RBMY1DP0C7P1 496 aaKnown RBP13.99□□□□□ -0.17
USP39-202ENST00000409025 C9orf85Q96MD7 179 aa13.99□□□□□ -0.17
USP39-202ENST00000409025 NF1P21359 2839 aa13.99□□□□□ -0.17
USP39-202ENST00000409025 CRXO43186 299 aaPredicted RBP13.98□□□□□ -0.17
USP39-202ENST00000409025 LINC00173Q6ZV60 143 aa13.98□□□□□ -0.17
USP39-202ENST00000409025 VAMP8Q9BV40 100 aa13.98□□□□□ -0.17
USP39-202ENST00000409025 OTOGQ6ZRI0 2925 aa13.98□□□□□ -0.17
USP39-202ENST00000409025 TRGV11A0A075B6L2 103 aa13.98□□□□□ -0.17
USP39-202ENST00000409025 CRLF1O75462 422 aa13.98□□□□□ -0.17
USP39-202ENST00000409025 KRTAP10-3P60369 221 aa13.98□□□□□ -0.17
USP39-202ENST00000409025 ODF3L2Q3SX64 289 aa13.98□□□□□ -0.17
USP39-202ENST00000409025 NRACQ8N912 160 aa13.98□□□□□ -0.17
USP39-202ENST00000409025 MAP1LC3CQ9BXW4 147 aa13.98□□□□□ -0.17
USP39-202ENST00000409025 MDFICQ9P1T7 246 aa13.98□□□□□ -0.17
USP39-202ENST00000409025 CLUHP3Q96NS8 147 aa13.97□□□□□ -0.17
USP39-202ENST00000409025 LINC01546A6NGU7 62 aa13.96□□□□□ -0.17
USP39-202ENST00000409025 PRSS47A8MTI9 375 aa13.96□□□□□ -0.17
USP39-202ENST00000409025 OR11H12B2RN74 326 aa13.96□□□□□ -0.17
USP39-202ENST00000409025 SYS1-DBNDD2H3BUS1 97 aa13.96□□□□□ -0.17
USP39-202ENST00000409025 MGPP08493 103 aa13.96□□□□□ -0.17
USP39-202ENST00000409025 SMIM17P0DL12 118 aa13.96□□□□□ -0.17
USP39-202ENST00000409025 SYT8Q8NBV8 401 aa13.96□□□□□ -0.17
USP39-202ENST00000409025 CBY3A6NI87 242 aa13.96□□□□□ -0.18
USP39-202ENST00000409025 HBDP02042 147 aa13.96□□□□□ -0.18
USP39-202ENST00000409025 RBMY1A1P0DJD3 496 aaKnown RBP13.96□□□□□ -0.18
USP39-202ENST00000409025 RBMY1CP0DJD4 496 aa13.96□□□□□ -0.18
USP39-202ENST00000409025 CMC4P56277 68 aaPredicted RBP13.96□□□□□ -0.18
USP39-202ENST00000409025 RBMY1FQ15415 496 aaKnown RBP13.96□□□□□ -0.18
USP39-202ENST00000409025 Q8N8P6 123 aa13.96□□□□□ -0.18
USP39-202ENST00000409025 MUC4Q99102 2169 aa13.95□□□□□ -0.18
USP39-202ENST00000409025 A0A096LNJ9 63 aa13.95□□□□□ -0.18
USP39-202ENST00000409025 KIR2DL5BA0A0G2JN68 375 aa13.95□□□□□ -0.18
USP39-202ENST00000409025 KIR2DL5BA0A0G2JPC4 375 aa13.95□□□□□ -0.18
USP39-202ENST00000409025 DDTP30046 118 aa13.95□□□□□ -0.18
USP39-202ENST00000409025 KIR2DL5AQ8N109 375 aa13.95□□□□□ -0.18
USP39-202ENST00000409025 DEFB125Q8N687 156 aa13.95□□□□□ -0.18
USP39-202ENST00000409025 C20orf202A1L168 122 aa13.94□□□□□ -0.18
USP39-202ENST00000409025 IGLV1-51P01701 117 aa13.94□□□□□ -0.18
USP39-202ENST00000409025 STHQ8IWL8 128 aa13.94□□□□□ -0.18
USP39-202ENST00000409025 ZNF747Q9BV97 191 aa13.94□□□□□ -0.18
USP39-202ENST00000409025 PAM16Q9Y3D7 125 aa13.94□□□□□ -0.18
USP39-202ENST00000409025 WNK1Q9H4A3 2382 aa13.94□□□□□ -0.18
USP39-202ENST00000409025 PET117Q6UWS5 81 aa13.94□□□□□ -0.18
USP39-202ENST00000409025 POM121L12Q8N7R1 296 aa13.94□□□□□ -0.18
USP39-202ENST00000409025 KIF25-AS1Q9Y6Z4 181 aa13.94□□□□□ -0.18
USP39-202ENST00000409025 IGLV2-18A0A075B6J9 118 aa13.92□□□□□ -0.18
USP39-202ENST00000409025 INSP01308 110 aa13.92□□□□□ -0.18
USP39-202ENST00000409025 PF4P02776 101 aa13.92□□□□□ -0.18
USP39-202ENST00000409025 SPATA12Q7Z6I5 190 aa13.92□□□□□ -0.18
USP39-202ENST00000409025 C20orf144Q9BQM9 153 aa13.92□□□□□ -0.18
USP39-202ENST00000409025 PPP1R17O96001 155 aa13.92□□□□□ -0.18
USP39-202ENST00000409025 RASL10AQ92737 203 aa13.92□□□□□ -0.18
USP39-202ENST00000409025 JPT2Q9H910 190 aa13.92□□□□□ -0.18
USP39-202ENST00000409025 HTN1P15515 57 aa13.91□□□□□ -0.18
USP39-202ENST00000409025 FCER1GP30273 86 aa13.91□□□□□ -0.18
USP39-202ENST00000409025 LINC00315P59091 139 aa13.91□□□□□ -0.18
USP39-202ENST00000409025 ATOH7Q8N100 152 aa13.91□□□□□ -0.18
USP39-202ENST00000409025 C20orf78Q9BR46 151 aa13.91□□□□□ -0.18
USP39-202ENST00000409025 SETXQ7Z333 2677 aaKnown RBP13.9□□□□□ -0.18
USP39-202ENST00000409025 TRPT1Q86TN4 253 aaKnown RBP13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms