RNA–Protein interactions for RNA: ENST00000407595.2

CCDC85A-201, Transcript of coiled-coil domain containing 85A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC85A, Length 3,982 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85A-201ENST00000407595 LMO4P61968 165 aa12.18□□□□□ -0.46
CCDC85A-201ENST00000407595 SNRPD3P62318 126 aaKnown RBP12.18□□□□□ -0.46
CCDC85A-201ENST00000407595 C12orf74Q32Q52 190 aa12.18□□□□□ -0.46
CCDC85A-201ENST00000407595 Q8N9W7 124 aa12.18□□□□□ -0.46
CCDC85A-201ENST00000407595 LINC01549A6NIU2 74 aa12.18□□□□□ -0.46
CCDC85A-201ENST00000407595 ORMDL2Q53FV1 153 aa12.18□□□□□ -0.46
CCDC85A-201ENST00000407595 TACC2O95359 2948 aa12.17□□□□□ -0.46
CCDC85A-201ENST00000407595 F6UB75 175 aa12.17□□□□□ -0.46
CCDC85A-201ENST00000407595 PLNP26678 52 aa12.17□□□□□ -0.46
CCDC85A-201ENST00000407595 NEGR1Q7Z3B1 354 aa12.17□□□□□ -0.46
CCDC85A-201ENST00000407595 Q8N8P6 123 aa12.17□□□□□ -0.46
CCDC85A-201ENST00000407595 IGKV2D-26A0A0A0MRZ7 120 aa12.17□□□□□ -0.46
CCDC85A-201ENST00000407595 DEFB136Q30KP8 78 aa12.17□□□□□ -0.46
CCDC85A-201ENST00000407595 ZNF56Q15929 161 aa12.17□□□□□ -0.46
CCDC85A-201ENST00000407595 FAM110DQ8TAY7 271 aaPredicted RBP12.17□□□□□ -0.46
CCDC85A-201ENST00000407595 CD7P09564 240 aa12.16□□□□□ -0.46
CCDC85A-201ENST00000407595 ZNF80P51504 273 aaPredicted RBP12.16□□□□□ -0.46
CCDC85A-201ENST00000407595 HELZ2Q9BYK8 2649 aaKnown RBP12.16□□□□□ -0.46
CCDC85A-201ENST00000407595 SPINK8P0C7L1 97 aa12.16□□□□□ -0.46
CCDC85A-201ENST00000407595 PRAC2D3DTV9 90 aa12.16□□□□□ -0.46
CCDC85A-201ENST00000407595 IGLV2-11P01706 119 aa12.16□□□□□ -0.46
CCDC85A-201ENST00000407595 SLC25A16P16260 332 aa12.16□□□□□ -0.46
CCDC85A-201ENST00000407595 NSUN5P1Q3KNT7 163 aa12.16□□□□□ -0.46
CCDC85A-201ENST00000407595 C10orf105Q8TEF2 133 aa12.16□□□□□ -0.46
CCDC85A-201ENST00000407595 CFHR4Q92496 578 aa12.16□□□□□ -0.46
CCDC85A-201ENST00000407595 TRAV8-2A0A0B4J237 113 aa12.15□□□□□ -0.46
CCDC85A-201ENST00000407595 F8W1H4 67 aa12.15□□□□□ -0.46
CCDC85A-201ENST00000407595 FOXE3Q13461 319 aa12.15□□□□□ -0.46
CCDC85A-201ENST00000407595 SYT8Q8NBV8 401 aa12.15□□□□□ -0.46
CCDC85A-201ENST00000407595 IGLL5B9A064 214 aa12.15□□□□□ -0.46
CCDC85A-201ENST00000407595 DLX4Q92988 240 aaPredicted RBP12.15□□□□□ -0.46
CCDC85A-201ENST00000407595 LINC00574Q9H8X3 128 aa12.15□□□□□ -0.46
CCDC85A-201ENST00000407595 TRAV12-3A0A0B4J271 114 aa12.14□□□□□ -0.47
CCDC85A-201ENST00000407595 ODF1Q14990 250 aa12.14□□□□□ -0.47
CCDC85A-201ENST00000407595 RAX2Q96IS3 184 aa12.14□□□□□ -0.47
CCDC85A-201ENST00000407595 TRAV2A0A0B4J234 112 aa12.14□□□□□ -0.47
CCDC85A-201ENST00000407595 C8orf31Q8N9H6 132 aa12.13□□□□□ -0.47
CCDC85A-201ENST00000407595 AGPAT4-IT1Q9H0P7 198 aa12.13□□□□□ -0.47
CCDC85A-201ENST00000407595 HLA-DRB4P13762 266 aa12.13□□□□□ -0.47
CCDC85A-201ENST00000407595 C2orf66Q6UXQ4 117 aa12.13□□□□□ -0.47
CCDC85A-201ENST00000407595 PRADC1Q9BSG0 188 aa12.13□□□□□ -0.47
CCDC85A-201ENST00000407595 HLA-DRB4X5D2U9 266 aa12.13□□□□□ -0.47
CCDC85A-201ENST00000407595 TRBV7-1A0A0A6YYK4 115 aa12.13□□□□□ -0.47
CCDC85A-201ENST00000407595 A8MWV9 139 aa12.13□□□□□ -0.47
CCDC85A-201ENST00000407595 CTSGP08311 255 aa12.13□□□□□ -0.47
CCDC85A-201ENST00000407595 DSCR9P59020 149 aa12.13□□□□□ -0.47
CCDC85A-201ENST00000407595 TTC32Q5I0X7 151 aa12.13□□□□□ -0.47
CCDC85A-201ENST00000407595 KLHL30-AS1Q8NEE0 82 aa12.13□□□□□ -0.47
CCDC85A-201ENST00000407595 FANCD2OSQ96PS1 177 aa12.13□□□□□ -0.47
CCDC85A-201ENST00000407595 LRBAP50851 2863 aa12.13□□□□□ -0.47
CCDC85A-201ENST00000407595 GAS8-AS1O95177 125 aa12.12□□□□□ -0.47
CCDC85A-201ENST00000407595 SIRPDQ9H106 197 aa12.12□□□□□ -0.47
CCDC85A-201ENST00000407595 TRAV21A0A0B4J279 112 aa12.12□□□□□ -0.47
CCDC85A-201ENST00000407595 DGAT2L7PQ6IED9 249 aa12.12□□□□□ -0.47
CCDC85A-201ENST00000407595 TRBV12-3P01733 135 aa12.12□□□□□ -0.47
CCDC85A-201ENST00000407595 LINC01559Q495D7 138 aa12.12□□□□□ -0.47
CCDC85A-201ENST00000407595 FOXI2Q6ZQN5 318 aa12.12□□□□□ -0.47
CCDC85A-201ENST00000407595 IGHV3-73A0A0B4J1V6 119 aa12.11□□□□□ -0.47
CCDC85A-201ENST00000407595 MYMXA0A1B0GTQ4 84 aa12.11□□□□□ -0.47
CCDC85A-201ENST00000407595 F8VRH5 84 aa12.11□□□□□ -0.47
CCDC85A-201ENST00000407595 FGF6P10767 208 aa12.11□□□□□ -0.47
CCDC85A-201ENST00000407595 SUMO2P61956 95 aaKnown RBP12.11□□□□□ -0.47
CCDC85A-201ENST00000407595 SRSF8Q9BRL6 282 aaKnown RBP12.11□□□□□ -0.47
CCDC85A-201ENST00000407595 RPL13AP40429 203 aaKnown RBP12.11□□□□□ -0.47
CCDC85A-201ENST00000407595 ATP6V0BQ99437 205 aa12.11□□□□□ -0.47
CCDC85A-201ENST00000407595 ANAPC13Q9BS18 74 aa12.11□□□□□ -0.47
CCDC85A-201ENST00000407595 RAI1Q7Z5J4 1906 aaPredicted RBP12.11□□□□□ -0.47
CCDC85A-201ENST00000407595 A0A087WWL8 130 aa12.11□□□□□ -0.47
CCDC85A-201ENST00000407595 PF4P02776 101 aa12.11□□□□□ -0.47
CCDC85A-201ENST00000407595 ZNF493Q6ZR52 646 aa12.11□□□□□ -0.47
CCDC85A-201ENST00000407595 USP24Q9UPU5 2620 aa12.1□□□□□ -0.47
CCDC85A-201ENST00000407595 IGLV11-55A0A075B6I3 123 aa12.1□□□□□ -0.47
CCDC85A-201ENST00000407595 C8orf86Q6ZUL3 223 aa12.1□□□□□ -0.47
CCDC85A-201ENST00000407595 FLNAP21333 2647 aaKnown RBP12.1□□□□□ -0.47
CCDC85A-201ENST00000407595 A0A087WX48 190 aa12.1□□□□□ -0.47
CCDC85A-201ENST00000407595 SNCGO76070 127 aa12.1□□□□□ -0.47
CCDC85A-201ENST00000407595 C11orf71Q6IPW1 123 aa12.1□□□□□ -0.47
CCDC85A-201ENST00000407595 GEMIN7Q9H840 131 aaKnown RBP12.1□□□□□ -0.47
CCDC85A-201ENST00000407595 AGRNO00468 2067 aa12.1□□□□□ -0.47
CCDC85A-201ENST00000407595 TRAV12-2A0A075B6T6 113 aa12.1□□□□□ -0.47
CCDC85A-201ENST00000407595 SMIM2Q9BVW6 85 aa12.1□□□□□ -0.47
CCDC85A-201ENST00000407595 DPH3P1Q9H4G8 78 aa12.1□□□□□ -0.47
CCDC85A-201ENST00000407595 RRN3P1Q2M238 152 aa12.09□□□□□ -0.47
CCDC85A-201ENST00000407595 J3QKU1 62 aa12.09□□□□□ -0.47
CCDC85A-201ENST00000407595 TEX29Q8N6K0 151 aa12.09□□□□□ -0.47
CCDC85A-201ENST00000407595 LY6G5BQ8NDX9 201 aa12.09□□□□□ -0.47
CCDC85A-201ENST00000407595 LINC00477Q96M19 166 aa12.09□□□□□ -0.47
CCDC85A-201ENST00000407595 DAZ1Q9NQZ3 744 aaKnown RBP12.08□□□□□ -0.48
CCDC85A-201ENST00000407595 ITPR3Q14573 2671 aa12.08□□□□□ -0.48
CCDC85A-201ENST00000407595 IGKV3OR2-268A0A0C4DH90 116 aa12.08□□□□□ -0.48
CCDC85A-201ENST00000407595 FSTL3O95633 263 aa12.08□□□□□ -0.48
CCDC85A-201ENST00000407595 UBE2E2Q96LR5 201 aa12.08□□□□□ -0.48
CCDC85A-201ENST00000407595 RPL39LQ96EH5 51 aaKnown RBP12.07□□□□□ -0.48
CCDC85A-201ENST00000407595 LINC01587Q99440 93 aa12.07□□□□□ -0.48
CCDC85A-201ENST00000407595 NPC2P61916 151 aa12.07□□□□□ -0.48
CCDC85A-201ENST00000407595 NPBQ8NG41 125 aa12.07□□□□□ -0.48
CCDC85A-201ENST00000407595 IGSF10Q6WRI0 2623 aa12.07□□□□□ -0.48
CCDC85A-201ENST00000407595 SPINK13Q1W4C9 94 aa12.07□□□□□ -0.48
CCDC85A-201ENST00000407595 MAPKAPK5-AS1Q8N8E1 139 aa12.07□□□□□ -0.48
CCDC85A-201ENST00000407595 SPAG8Q99932 426 aaPredicted RBP12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 111.2 ms